Miyakogusa Predicted Gene
- Lj2g3v2351520.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N138_SOYBN |
359 |
66.4 |
72.8 |
(tr|I1N138) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G80930.1 |
357 |
62.8 |
70.4 |
| Symbols: | MIF4G domain-containing protein / MA3 domain-containing protein | chr1:30405774-30409499 REVERSE LENGTH=900 |
| Medicago |
Medtr3g434840.1 |
361 |
66.9 |
74.3 |
| pre-mRNA-splicing factor cwc22, putative | HC | chr3:11335847-11342445 | 20130731 |
| Soybean |
Glyma13g24660.1 |
359 |
66.4 |
72.5 |
|
| LJGI |
gnl|LJGI|BW629935 |
135 |
90.7 |
90.7 |
similar to UniRef100_A7QDS0 Cluster: Chromosome chr15 scaffold_82, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_82, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v2351520.1 |
length: 290 aa. |
| IPR003891 |
Initiation factor eIF-4 gamma, MA3 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF02847 |
MA3 |
4.4e-24 |
150-256 |
| HMMSmart |
SM00544 |
Domain |
2.3e-31 |
150-256 |
| ProfileScan |
PS51366 |
MI |
21.584 |
149-265 |
| no_ID |
|
| HMMPanther |
PTHR18034 |
CELL |
4.5e-134 |
6-290 |
| HMMPanther |
PTHR18034:SF3 |
CELL |
4.5e-134 |
6-290 |
| Seg |
seg |
seg |
NA |
66-86 |
- Wolf-PSORT
Lj2g3v2351520.1 nucl 8, cyto 2, mito 2, chlo 1, cysk 1, cyto_mito 1, cyto_pero 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v2351520.1 |
|