Miyakogusa Predicted Gene

Lj2g3v1378980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL F6HQE5_VITVI 252 45.7 62.9 (tr|F6HQE5) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_03s0063g00930 PE=4 SV=1
TAIR_pep AT5G39710.1 223 42.5 60.4 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:15895729-15897972 FORWARD LENGTH=747
Medicago Medtr1g033960.1 251 46.5 61.6 | PPR containing plant-like protein | HC | chr1:12282466-12279095 | 20130731
Soybean Glyma07g29110.1 169 34.9 52.1  
LJGI gnl|LJGI|TC60576 422 86.0 86.0 similar to UniRef100_A7P9F5 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v1378980.1 length: 315 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00037 72-99
193-222
HMMPfam PF12854 PPR_1 3.1e-10 14-46
HMMTigr TIGR00756 PPR: 3.6e-05 21-48
72-103
193-224
ProfileScan PS51375 PPR 6.281 19-49
68-102
103-137
190-224
155-189
no_ID  
HMMPanther PTHR24015 FAMILY 1.4e-29 11-236
HMMPanther PTHR24015:SF0 SUBFAMILY 1.4e-29 11-236
Wolf-PSORT
Lj2g3v1378980.1	chlo 5, cyto 4, extr 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v1378980.1