Miyakogusa Predicted Gene
- Lj2g3v1378980.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v1378980.1 Non Chatacterized Hit- tr|F6HQE5|F6HQE5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,27.43,3e-18,PPR,Pentatricopeptide repeat; PPR: pentatricopeptide
repeat domain,Pentatricopeptide repeat; PPR_1,P,CUFF.36905.1
(315 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 223 1e-58
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 7e-17
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 84 1e-16
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 3e-16
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 1e-15
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 2e-15
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 80 2e-15
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 4e-15
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 6e-15
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 6e-15
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 7e-15
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 1e-14
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 2e-14
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 3e-14
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 3e-14
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 4e-14
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 6e-14
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 1e-13
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 1e-13
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 2e-13
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 2e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 2e-13
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 3e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 3e-13
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 72 4e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 4e-13
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 5e-13
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 5e-13
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 8e-13
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 1e-12
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 71 1e-12
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 1e-12
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 70 2e-12
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 70 2e-12
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 2e-12
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 3e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 4e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 6e-12
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 8e-12
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 8e-12
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 68 9e-12
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 1e-11
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 1e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 2e-11
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 66 3e-11
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 3e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 66 4e-11
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 5e-11
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 6e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 6e-11
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 7e-11
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 9e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 1e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 2e-10
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 63 2e-10
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 3e-10
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 3e-10
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 5e-10
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 6e-10
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 8e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 1e-09
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 60 2e-09
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 2e-09
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 3e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 59 5e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 5e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 7e-09
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 57 1e-08
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 1e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 57 2e-08
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 56 3e-08
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 4e-08
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 4e-08
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 5e-08
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 54 1e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 1e-07
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 1e-07
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 53 2e-07
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 2e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 2e-07
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 53 3e-07
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 4e-07
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 52 4e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 5e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 9e-07
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 1e-06
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 4e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 223 bits (569), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/308 (42%), Positives = 186/308 (60%), Gaps = 25/308 (8%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK----------------CNWWL 54
M E GLSPD VSY+TV+SGFCR ++ +A + REM K C
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 55 DKDVHISLMEDL--SYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
K+ L E++ L P Y++LIN Y EG+ + A + EM+ G D +Y
Sbjct: 501 TKEA-CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYS 559
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRS 168
+ +NGL+K++RTR+AK LL + Y++ +PS VTY LIENCSN EFKS+V L+K
Sbjct: 560 VLINGLNKQSRTREAKRLLLKLFYEES--VPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
+G+M EA + ++ML N+KPDG YN++I HCR ++ KAY +YKEM+ GF H +
Sbjct: 618 KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVT 677
Query: 229 LIALINALHYVQMYNEKSWVIESTLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEIA 288
+IAL+ ALH NE + VI LRSC L+++E KVL +IN +E ++ +L+VLAE+A
Sbjct: 678 VIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMA 737
Query: 289 MDGLLLDG 296
DG L +G
Sbjct: 738 KDGFLPNG 745
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 119/278 (42%), Gaps = 67/278 (24%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M GL P+ +SYN VI+G CR +++ ++ EM+ + + LD+
Sbjct: 266 MALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR-GYSLDEVT------------ 312
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LI GY EGNF A + EMLR G + +Y ++ + K A E+L M
Sbjct: 313 -YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 131 -----------------------IYDQCFRM----------PSYVTYDILIE-NCSNNEF 156
++ +R+ PS VTY+ LI +C +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 157 KSLVELVKDLRSRGL-------------------MNEAAKAHDTMLEGNYKPDGAVYNLL 197
+ + +++D++ +GL ++EA + M+E KPD Y+ L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 198 IFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
I C +A D+Y+EM+ G P F+ ALINA
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINA 529
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 94/227 (41%), Gaps = 40/227 (17%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDP--- 71
G P +SYN V+ R +K N ++V ++E S + P
Sbjct: 164 GFMPGVLSYNAVLDATIR---------------SKRNISFAENVFKEMLE--SQVSPNVF 206
Query: 72 -YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ LI G+ GN VA T + +M G + +Y ++G K + D + L M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
P+ ++Y+++I C K + ++ ++ RG Y
Sbjct: 267 ALKGL--EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG----------------YSL 308
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
D YN LI +C+ N +A M+ EM+ +G P + + +LI+++
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSM 355
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 123/288 (42%), Gaps = 37/288 (12%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M ++GL P+ V+Y+ +I FCR +L A + EM +D + +S+
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM-------VDTGLKLSVY------- 438
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
PY+SLING+ G+ A F EM+ +Y M G K + A L +
Sbjct: 439 PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKA----LRL 494
Query: 131 IYDQCFR--MPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
++ + PS T+ L+ L GL+ +A K + M E N K
Sbjct: 495 YHEMTGKGIAPSIYTFTTLLSG---------------LFRAGLIRDAVKLFNEMAEWNVK 539
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWV 248
P+ YN++I +C ++ KA++ KEM G P +S LI+ L +E
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 249 IESTLRS-CNLNDSELRKVLNKINVKERSIYPLLEVLAEIAMDGLLLD 295
++ + C LN+ +L+ +E + L V E+ G+ LD
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGF-CREGKLEEALSVCQEMVQRGVDLD 646
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 106/238 (44%), Gaps = 36/238 (15%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
+S+ M + GL YN++I+G C+ ++ A M EM ++K + +++
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM-------INKKLEPTVV 473
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
Y+SL+ GY ++G A Y EM G + ++ ++GL + RDA
Sbjct: 474 -------TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDA 526
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRG------------ 170
+ LF + P+ VTY+++IE C + E +K++ +G
Sbjct: 527 VK--LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLI 584
Query: 171 ----LMNEAAKAH---DTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYG 221
L +A++A D + +GN + + Y L+ CR +++A + +EM+ G
Sbjct: 585 HGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 121/304 (39%), Gaps = 82/304 (26%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLS--- 67
M E + P+ V+YN +I G+C ++ KA++ ++EM K D + L+ L
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLIHGLCLTG 591
Query: 68 -------YLDP------------YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
++D Y+ L++G+ EG + A + EM++ G D Y
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG 651
Query: 109 LFMNG--------------------------------LSKKARTRDAKEYLL---FMIYD 133
+ ++G + K++T D KE MI +
Sbjct: 652 VLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE 711
Query: 134 QCFRMPSYVTYDILIENCSNNEFKSLVELV-------------------KDLRSRGL--M 172
C +P+ VTY +I F + E++ D+ ++G M
Sbjct: 712 GC--VPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 173 NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIAL 232
+A + H+ +L+G + A YN+LI CR +++A ++ M+ G +P + +
Sbjct: 770 QKAVELHNAILKG-LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTM 828
Query: 233 INAL 236
IN L
Sbjct: 829 INEL 832
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 90/217 (41%), Gaps = 33/217 (15%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M G P+ V+Y VI+G C+ + +A L +M S+ ++Y
Sbjct: 707 LMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS----------SVPNQVTYG 756
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
L G E + Q A + +L+ G ++ +Y + + G ++ R +A E +
Sbjct: 757 CFLDILTKG---EVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITR 812
Query: 130 MIYDQCFRMPSYVTYDILI-ENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
MI D P +TY +I E C N+ K +EL ++M E +
Sbjct: 813 MIGDGV--SPDCITYTTMINELCRRNDVKKAIEL----------------WNSMTEKGIR 854
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPH 225
PD YN LI C + KA ++ EM+ G P+
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 87/225 (38%), Gaps = 33/225 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M +G+ PD Y VI C +++L +A +++ M+A DV+I
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEAT-----GCDVNIV--------- 263
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
PY+ LI+G + A ++ D +YC + GL K E + M
Sbjct: 264 PYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEM 323
Query: 131 IYDQCFRM-PSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ C R PS L+E LR RG + EA +++ P
Sbjct: 324 L---CLRFSPSEAAVSSLVEG---------------LRKRGKIEEALNLVKRVVDFGVSP 365
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
+ VYN LI C+ +A ++ M G P+ + LI+
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILID 410
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 109/248 (43%), Gaps = 40/248 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMD------------------AKCNW 52
M MG P+ V YNT+I G C+ +++ A DL+ M+
Sbjct: 177 MVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGR 236
Query: 53 WLDKDVHISLMEDLS-YLDPYS--SLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
W D +S M Y D ++ +LI+ + EG A FY EM+R D +Y L
Sbjct: 237 WSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSL 296
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRS 168
+ GL +R +A+E FM+ CF P VTY ILI C + + + ++L ++
Sbjct: 297 LIYGLCMYSRLDEAEEMFGFMVSKGCF--PDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
RG++ Y +LI +CR ++ A ++++ M+ G P++ +
Sbjct: 355 RGVVRNT----------------VTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 229 LIALINAL 236
L++ L
Sbjct: 399 YNVLLHGL 406
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 104/245 (42%), Gaps = 36/245 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M +G+ + + N +++ FCR +L A + +M I L + S +
Sbjct: 107 MQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKM-------------IKLGHEPSIV- 152
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+ SL+NG+ A + +M+ +GY + Y ++GL K + +A + L M
Sbjct: 153 TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSR-------------------G 170
D P VTY+ LI CS+ + +V + R G
Sbjct: 213 EKDGI--GPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
++EA + ++ M+ + PD Y+LLI+ C +D+A +M+ M+ G P + +
Sbjct: 271 RVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYS 330
Query: 231 ALINA 235
LIN
Sbjct: 331 ILING 335
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 113/249 (45%), Gaps = 42/249 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK----------------CNW-- 52
M + L P + YNT+I G C+ + + A +L +EM+ K CN+
Sbjct: 247 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 53 WLDKDVHISLMEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
W D +S M + ++P +S+LI+ ++ EG A Y EM++ +Y
Sbjct: 307 WSDASRLLSDMIE-RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+NG R +AK+ FM+ CF P VTY+ LI+ C + +E+ +++
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCF--PDVVTYNTLIKGFCKYKRVEEGMEVFREMS 423
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
RGL+ GN YN+LI + + D A +++KEM+ G P++
Sbjct: 424 QRGLV------------GNT----VTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 228 SLIALINAL 236
+ L++ L
Sbjct: 468 TYNTLLDGL 476
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 106/242 (43%), Gaps = 40/242 (16%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
PD V+YNT+I GFC+ + + + ++ REM + + V Y+ LI
Sbjct: 394 PDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR--GLVGNTV------------TYNILIQ 439
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G G+ +A + EM+ G + +Y ++GL K + A ++ Y Q +
Sbjct: 440 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA---MVVFEYLQRSK 496
Query: 138 M-PSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK------- 188
M P+ TY+I+IE C + + +L +L +G+ + A++TM+ G +
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVV-AYNTMISGFCRKGSKEEA 555
Query: 189 -------------PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
P+ YN LI R + + + ++ KEM GFA ++ + N
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNM 615
Query: 236 LH 237
LH
Sbjct: 616 LH 617
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 31/234 (13%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M +G+ + +Y+ +I+ FCR +L A ++ +M L + +I
Sbjct: 99 VVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM-----MKLGYEPNIVT 153
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
+ SSL+NGY A +M GY + ++ ++GL + +
Sbjct: 154 L---------SSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASE 204
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A + M+ C P VTY ++ V L RG + A + M
Sbjct: 205 AMALIDRMVAKGC--QPDLVTYGVV---------------VNGLCKRGDTDLAFNLLNKM 247
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+G +P +YN +I C+ ++D A +++KEM G P++ + +LI+ L
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/303 (19%), Positives = 120/303 (39%), Gaps = 36/303 (11%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M ++G P+ V+ +++++G+C + + +A L+ +M + V
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFV--TGYQPNTV------------ 187
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+++LI+G A M+ G D +Y + +NGL K+ T A + L
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA--FNLLN 245
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLM----------------- 172
+Q P + Y+ +I+ C + L K++ ++G+
Sbjct: 246 KMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYG 305
Query: 173 --NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
++A++ M+E PD ++ LI + + +A +Y EM+ P + +
Sbjct: 306 RWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365
Query: 231 ALINALHYVQMYNEKSWVIESTLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEIAMD 290
+LIN +E + E + D L K K + + +EV E++
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425
Query: 291 GLL 293
GL+
Sbjct: 426 GLV 428
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 119/303 (39%), Gaps = 83/303 (27%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK-----------------CNW- 52
M EMG PD V YNT+I G C+I + A +L M+ C+
Sbjct: 165 MEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 53 WLDKDVHISLMEDLSYLD------PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDS 106
W D LM D+ D ++++I+ ++ EG F A Y EM R D +
Sbjct: 225 WSDA---ARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 107 YCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKD 165
Y +NGL R +AK+ L M+ C +P VTY+ LI C + +L ++
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGC--LPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 166 LRSRGLMNEAAKAHDTMLEGNY---KPDGA------------------------------ 192
+ RGL+ + ++T+++G + +PD A
Sbjct: 340 MAQRGLVGDTI-TYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 193 -------------------VYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALI 233
YN++I C+ NV+ A+D+++ + G P + S +I
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 234 NAL 236
+
Sbjct: 459 SGF 461
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 101/253 (39%), Gaps = 36/253 (14%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
I +S M + G PD V+ +++I+GFC+ + A DL+ +M+ DV I
Sbjct: 122 IALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME---EMGFRPDVVI-- 176
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
Y+++I+G G A + M R G +D +Y + GL R D
Sbjct: 177 ---------YNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIE--------------------NCSNNEFKSLVEL 162
A + M+ +P+ +T+ +I+ C + + + L
Sbjct: 228 AARLMRDMVMRDI--VPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSL 285
Query: 163 VKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGF 222
+ L G ++EA + D M+ PD YN LI C+ VD+ +++EM G
Sbjct: 286 INGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGL 345
Query: 223 APHMFSLIALINA 235
+ +I
Sbjct: 346 VGDTITYNTIIQG 358
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 31/209 (14%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M + GL P+ V++NT+I GFCR +L++A + EM A V+++
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA---------VNVA-----PNT 343
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y++LINGY +G+ ++A+ FY +M+ G D +Y + GL K+A+TR A +++
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 130 MIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ D+ +P+ T+ LI + + V+ RG + + +M+ P
Sbjct: 404 L--DKENLVPNSSTFSALI----------MGQCVRKNADRGF-----ELYKSMIRSGCHP 446
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMM 218
+ +N+L+ CR + D A + +EM+
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMV 475
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 106/209 (50%), Gaps = 31/209 (14%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M + GL P+ V++NT+I GFCR +L++A + EM A V+++
Sbjct: 298 MMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA---------VNVA-----PNT 343
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y++LINGY +G+ ++A+ FY +M+ G D +Y + GL K+A+TR A +++
Sbjct: 344 VTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKE 403
Query: 130 MIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ D+ +P+ T+ LI + + V+ RG + + +M+ P
Sbjct: 404 L--DKENLVPNSSTFSALI----------MGQCVRKNADRGF-----ELYKSMIRSGCHP 446
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMM 218
+ +N+L+ CR + D A + +EM+
Sbjct: 447 NEQTFNMLVSAFCRNEDFDGASQVLREMV 475
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 119/309 (38%), Gaps = 78/309 (25%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
+TE G SP+ V Y T+I G C+ E+ KA DL EM + L+ +
Sbjct: 189 LTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG-----------KLGLVANER--- 234
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ LING G + + Y +M G + +Y MN L K RT+DA F
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA-----FQ 289
Query: 131 IYDQ--------------------CFRM------------------PSYVTYDILIEN-C 151
++D+ C M P+ +TY+ LI+ C
Sbjct: 290 VFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFC 349
Query: 152 SNNEFKSLVELVKDLRSRGL-------------------MNEAAKAHDTMLEGNYKPDGA 192
+ + L +DL+SRGL + AAK M E KP
Sbjct: 350 GVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKV 409
Query: 193 VYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIEST 252
Y +LI R N++KA + M G P + + LI+ NE S + +S
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469
Query: 253 L-RSCNLND 260
+ ++C N+
Sbjct: 470 VEKNCEPNE 478
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 127/265 (47%), Gaps = 36/265 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G+S + V+YNT+I G CR +L +A ++ +M + ++ +L+
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSD-------GINPNLI------- 339
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LI+G+ G A + ++ G S +Y + ++G +K T A + + M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399
Query: 131 IYDQCFRMPSYVTYDILIENC--SNNEFKSL--------VELVKDLRS----------RG 170
++ PS VTY ILI+ S+N K++ + LV D+ + +G
Sbjct: 400 --EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
MNEA++ +M+E N +P+ +YN +I +C+ + +A + KEM AP++ S
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 231 ALINALHYVQMYNEKSWVIESTLRS 255
+I L + E ++E + S
Sbjct: 518 YMIEVLCKERKSKEAERLVEKMIDS 542
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 122/294 (41%), Gaps = 39/294 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G PD +Y T+ISG CR + +A L EM ++KD +++
Sbjct: 183 MPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM-------VEKDCAPTVV------- 228
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+SLING N A + EM G + +Y M+GL K R+ A E M
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMM 288
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ C P+ VTY LI C + + VEL+ + +GL KP
Sbjct: 289 MARGC--RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGL----------------KP 330
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQM-----YNE 244
D +Y +I C +A + EM+ G P+ + + + V Y
Sbjct: 331 DAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPS 390
Query: 245 KSWVIESTLRSCNLN-DSELRKVLNKINVKERSIYPLLEVLAEIAMDGLLLDGG 297
+++ + ++RS ++ + E + L K K+ ++++ EI DG + G
Sbjct: 391 RAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKG 444
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 117/268 (43%), Gaps = 43/268 (16%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREM---DAKCNW--------WLDKDV 58
VM + G PD +YN+VISG C++ E+++A +++ +M D N L K+
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379
Query: 59 HISLMEDLSYLDP----------YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
+ +L+ + ++SLI G N +VA + EM G D +Y
Sbjct: 380 QVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYN 439
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+ ++ L K + +A L M C R S +TY+ LI+ C N+ + E+ ++
Sbjct: 440 MLIDSLCSKGKLDEALNMLKQMELSGCAR--SVITYNTLIDGFCKANKTREAEEIFDEME 497
Query: 168 SRGL-------------------MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVD 208
G+ + +AA+ D M+ KPD YN L+ CR ++
Sbjct: 498 VHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIK 557
Query: 209 KAYDMYKEMMHYGFAPHMFSLIALINAL 236
KA D+ + M G P + + LI+ L
Sbjct: 558 KAADIVQAMTSNGCEPDIVTYGTLISGL 585
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 32/227 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M+ G+ PD ++N +I CR +LR A ++ +M + + L D
Sbjct: 180 MSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPS---YGLVPDEKT---------- 226
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+++++ GY+ EG+ A +M+ G S S + ++G K+ R DA ++ M
Sbjct: 227 -FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
F P T++ L+ C K +E++ D ML+ Y P
Sbjct: 286 SNQDGF-FPDQYTFNTLVNGLCKAGHVKHAIEIM----------------DVMLQEGYDP 328
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
D YN +I C+ V +A ++ +M+ +P+ + LI+ L
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 103/245 (42%), Gaps = 42/245 (17%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKC--------NWWLDK----- 56
V+T G+ PD ++N++I G C R A +L EM +K N +D
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449
Query: 57 --DVHISLMEDLSY------LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
D +++++ + + Y++LI+G+ + A + EM G S + +Y
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYN 509
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
++GL K R DA + + MI + + P TY+ L+ + C + K ++V+ +
Sbjct: 510 TLIDGLCKSRRVEDAAQLMDQMIMEG--QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMT 567
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYG--FAPH 225
S G +PD Y LI C+ V+ A + + + G PH
Sbjct: 568 SNGC----------------EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPH 611
Query: 226 MFSLI 230
++ +
Sbjct: 612 AYNPV 616
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 42/249 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK----------------CNW-- 52
M + + D V YNT+I G C+ + + A +L EMD K CN+
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 53 WLDKDVHISLMEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
W D +S M + ++P +S+LI+ ++ EG A Y EM++ D +Y
Sbjct: 309 WSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+NG R +AK MI CF P+ VTY LI+ C + +EL +++
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYSTLIKGFCKAKRVEEGMELFREMS 425
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
RGL+ GN Y LI + + D A ++K+M+ G P++
Sbjct: 426 QRGLV------------GNT----VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 228 SLIALINAL 236
+ L++ L
Sbjct: 470 TYNILLDGL 478
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 108/241 (44%), Gaps = 38/241 (15%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
P+ V+Y+T+I GFC+ + + + +L REM + L+ + Y++LI+
Sbjct: 396 PNVVTYSTLIKGFCKAKRVEEGMELFREMSQR-----------GLVGNTV---TYTTLIH 441
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G+ + A + +M+ +G + +Y + ++GL K + AK ++F +
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL--AKAMVVFEYLQRSTM 499
Query: 138 MPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK-------- 188
P TY+I+IE C + + EL +L +G+ + A++TM+ G +
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGV-SPNVIAYNTMISGFCRKGSKEEAD 558
Query: 189 ------------PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
P+ YN LI R + + + ++ KEM GFA ++ + N L
Sbjct: 559 SLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Query: 237 H 237
H
Sbjct: 619 H 619
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M +G+S D +Y+ I+ FCR +L A ++ +M + +
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM-----------MKLGY 149
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
D+ L SSL+NGY A +M+ +GY D ++ ++GL + +
Sbjct: 150 EPDIVTL---SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A + M+ C P VTY + V L RG ++ A M
Sbjct: 207 AVALVDQMVQRGC--QPDLVTYGTV---------------VNGLCKRGDIDLALSLLKKM 249
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+G + D +YN +I C+ ++D A +++ EM + G P +F+ +LI+ L
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 114/288 (39%), Gaps = 66/288 (22%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
VM+ G PD V+YNT+I GFC+ EL KA ++ + D K DV
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK--DVKSGSVCSPDVVT--------- 279
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y+S+I+GY G + A + +MLRLG ++ + ++G +K A+E
Sbjct: 280 --YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 130 MIYDQCFR---------------------------------MPSYVTYDILIEN-CSNNE 155
MI CF P+ TY ILI C+ N
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 156 FKSLVELVKDLRSR-------------------GLMNEAAKAHDTMLEGNYKPDGAVYNL 196
EL+ L S+ G +NEA + M + KPD + +
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 197 LIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
LI HC + +A ++ +M+ G +P ++ +L++ L M E
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 114/288 (39%), Gaps = 66/288 (22%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
VM+ G PD V+YNT+I GFC+ EL KA ++ + D K DV
Sbjct: 231 VMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFK--DVKSGSVCSPDVVT--------- 279
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y+S+I+GY G + A + +MLRLG ++ + ++G +K A+E
Sbjct: 280 --YTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGK 337
Query: 130 MIYDQCFR---------------------------------MPSYVTYDILIEN-CSNNE 155
MI CF P+ TY ILI C+ N
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 156 FKSLVELVKDLRSR-------------------GLMNEAAKAHDTMLEGNYKPDGAVYNL 196
EL+ L S+ G +NEA + M + KPD + +
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 197 LIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
LI HC + +A ++ +M+ G +P ++ +L++ L M E
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKE 505
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M ++GL P+ +YN++++G C+ + +A L+ E +A L+ D
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA---GLNADTVT---------- 528
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++L++ Y G A EML G ++ + MNG D ++ L +M
Sbjct: 529 -YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ P+ T++ L++ C N K+ + KD+ SRG+ P
Sbjct: 588 LAKGI--APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV----------------GP 629
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVI 249
DG Y L+ HC+ N+ +A+ +++EM GF+ + + LI + + E V
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 250 ESTLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEI 287
+ R D E+ + K + +++ + EI
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 40/249 (16%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M G +PD +SY+TV++G+CR EL K + L+ M K ++ SY+
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG------------LKPNSYI 318
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y S+I A + EM+R G D Y ++G K+ R A ++
Sbjct: 319 --YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF-- 374
Query: 130 MIYDQCFR--MPSYVTYDILIEN------------------CSNNEFKSL--VELVKDLR 167
Y+ R P +TY +I C E S+ EL+
Sbjct: 375 --YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
G M +A + H+ M++ P+ Y LI C+ ++D A ++ EM G P++F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 228 SLIALINAL 236
+ +++N L
Sbjct: 493 TYNSIVNGL 501
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 40/303 (13%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREM-DAKCNWWLDKDVHISLMEDLSYLDPYS 73
GL PD V++ +I+G+C+ ++ A+ + M A C+ + Y+
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS---------------PNVVTYT 460
Query: 74 SLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYD 133
+LI+G EG+ A EM ++G + +Y +NGL K +A + L ++
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK--LVGEFE 518
Query: 134 QCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL-------------------MN 173
VTY L++ C + E E++K++ +GL +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 174 EAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALI 233
+ K + ML P+ +N L+ ++C N+ A +YK+M G P + L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 234 NALHYVQMYNEKSWVIESTLRSCNLNDS-ELRKVLNKINVKERSIYPLLEVLAEIAMDGL 292
H +++W + ++ + S VL K +K + EV ++ +GL
Sbjct: 639 KG-HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 293 LLD 295
D
Sbjct: 698 AAD 700
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 118/278 (42%), Gaps = 33/278 (11%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M ++GL P+ +YN++++G C+ + +A L+ E +A L+ D
Sbjct: 482 MWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAA---GLNADTVT---------- 528
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++L++ Y G A EML G ++ + MNG D ++ L +M
Sbjct: 529 -YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ P+ T++ L++ C N K+ + KD+ SRG+ P
Sbjct: 588 LAKGI--APNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV----------------GP 629
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVI 249
DG Y L+ HC+ N+ +A+ +++EM GF+ + + LI + + E V
Sbjct: 630 DGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 250 ESTLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEI 287
+ R D E+ + K + +++ + EI
Sbjct: 690 DQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEI 727
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 40/249 (16%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M G +PD +SY+TV++G+CR EL K + L+ M K ++ SY+
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG------------LKPNSYI 318
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y S+I A + EM+R G D Y ++G K+ R A ++
Sbjct: 319 --YGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFF-- 374
Query: 130 MIYDQCFR--MPSYVTYDILIEN------------------CSNNEFKSL--VELVKDLR 167
Y+ R P +TY +I C E S+ EL+
Sbjct: 375 --YEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYC 432
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
G M +A + H+ M++ P+ Y LI C+ ++D A ++ EM G P++F
Sbjct: 433 KAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIF 492
Query: 228 SLIALINAL 236
+ +++N L
Sbjct: 493 TYNSIVNGL 501
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/303 (21%), Positives = 124/303 (40%), Gaps = 40/303 (13%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREM-DAKCNWWLDKDVHISLMEDLSYLDPYS 73
GL PD V++ +I+G+C+ ++ A+ + M A C+ + Y+
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS---------------PNVVTYT 460
Query: 74 SLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYD 133
+LI+G EG+ A EM ++G + +Y +NGL K +A + L ++
Sbjct: 461 TLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK--LVGEFE 518
Query: 134 QCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL-------------------MN 173
VTY L++ C + E E++K++ +GL +
Sbjct: 519 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578
Query: 174 EAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALI 233
+ K + ML P+ +N L+ ++C N+ A +YK+M G P + L+
Sbjct: 579 DGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLV 638
Query: 234 NALHYVQMYNEKSWVIESTLRSCNLNDS-ELRKVLNKINVKERSIYPLLEVLAEIAMDGL 292
H +++W + ++ + S VL K +K + EV ++ +GL
Sbjct: 639 KG-HCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGL 697
Query: 293 LLD 295
D
Sbjct: 698 AAD 700
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 114/257 (44%), Gaps = 46/257 (17%)
Query: 5 VSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK--------------- 49
VS M E+G PD V+YN +I C+ + + A+D +E++ K
Sbjct: 175 VSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNG 234
Query: 50 -CN--WWLDKDVHISLMEDL--SYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGY 100
CN W D L+ D+ + P YS+L++ ++ G A + EM+R+
Sbjct: 235 LCNSSRWSD---AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSI 291
Query: 101 SSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSL 159
D +Y +NGL R +A + M+ C + V+Y+ LI C +
Sbjct: 292 DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC--LADVVSYNTLINGFCKAKRVEDG 349
Query: 160 VELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMH 219
++L +++ RGL++ ++T+++G ++ +VDKA + + +M
Sbjct: 350 MKLFREMSQRGLVSNTV-TYNTLIQGFFQAG---------------DVDKAQEFFSQMDF 393
Query: 220 YGFAPHMFSLIALINAL 236
+G +P +++ L+ L
Sbjct: 394 FGISPDIWTYNILLGGL 410
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 100/234 (42%), Gaps = 31/234 (13%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M +G+ D ++N VI+ FC ++ A ++ +M K + D+ V I
Sbjct: 103 VVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKM-LKLGYEPDR-VTIG- 159
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
SL+NG+ A + +M+ +GY D +Y ++ L K R D
Sbjct: 160 -----------SLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVND 208
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A ++ F ++ P+ VTY L+ N+ S +AA+ M
Sbjct: 209 AFDF--FKEIERKGIRPNVVTYTALVNGLCNSSRWS---------------DAARLLSDM 251
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
++ P+ Y+ L+ + V +A ++++EM+ P + + +LIN L
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 99/227 (43%), Gaps = 33/227 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G PD V++N ++ GFC++ + +A++L+R +KD + L
Sbjct: 259 MQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLR--------LFEKDGFVL------GLR 304
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YSSLI+G + A+ Y ML+ D Y + + GLSK + DA + L
Sbjct: 305 GYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLL--- 361
Query: 131 IYDQCFRMPSY-VTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
MPS ++ D N ++K L RGL+ E M E P
Sbjct: 362 -----SSMPSKGISPDTYCYNA----------VIKALCGRGLLEEGRSLQLEMSETESFP 406
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
D + +LI CR V +A +++ E+ G +P + + ALI+ L
Sbjct: 407 DACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGL 453
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 42/287 (14%)
Query: 15 GLSPDGVSYNTVISGFCRI---EELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDP 71
G+S D + +IS + ++ E+ +++ M+E D + + + + +M +
Sbjct: 122 GVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMRE------ 175
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
E F +A+ Y EML+ S + ++ + M+GL KK RT DA++ M
Sbjct: 176 ----------EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK----MF 221
Query: 132 YDQCFR--MPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKA-HDTMLEGNYK 188
D R P+ VTY ILI L RG ++A K ++ GNY
Sbjct: 222 DDMTGRGISPNRVTYTILISG---------------LCQRGSADDARKLFYEMQTSGNY- 265
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWV 248
PD +N L+ C+ + +A+++ + GF + +LI+ L + Y + +
Sbjct: 266 PDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFEL 325
Query: 249 IESTLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEIAMDGLLLD 295
+ L+ D L +L + K I L++L+ + G+ D
Sbjct: 326 YANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 27/234 (11%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G+SPD YN VI C L + L EM ++ + D H L+
Sbjct: 364 MPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEM-SETESFPDACTHTILI------- 415
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
S NG + E A + E+ + G S ++ ++GL K ++A+ +
Sbjct: 416 -CSMCRNGLVRE-----AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEAR----LL 465
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
++ P+ + + + + N F ++VE L++ + A DT PD
Sbjct: 466 LHKMEVGRPASLF--LRLSHSGNRSFDTMVESGSILKA---YRDLAHFADT----GSSPD 516
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
YN+LI CR ++D A + + G +P + LIN LH V E
Sbjct: 517 IVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 109/249 (43%), Gaps = 42/249 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK----------------CNW-- 52
M + + D V Y T+I C + + A +L EMD K CN+
Sbjct: 246 MEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 305
Query: 53 WLDKDVHISLMEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
W D +S M + ++P +S+LI+ ++ EG A Y EM++ D +Y
Sbjct: 306 WSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 364
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+NG R +AK MI CF P+ VTY+ LI+ C + +EL +++
Sbjct: 365 SLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYNTLIKGFCKAKRVEEGMELFREMS 422
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
RGL+ ++T+++G +F+ C D A ++K+M+ G P +
Sbjct: 423 QRGLVGNTV-TYNTLIQG------------LFQAGDC---DMAQKIFKKMVSDGVPPDII 466
Query: 228 SLIALINAL 236
+ L++ L
Sbjct: 467 TYSILLDGL 475
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 40/252 (15%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
P+ V+YNT+I GFC+ + + + +L REM + + V Y++LI
Sbjct: 393 PNVVTYNTLIKGFCKAKRVEEGMELFREMSQR--GLVGNTV------------TYNTLIQ 438
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G G+ +A + +M+ G D +Y + ++GL K + A L+ Y Q +
Sbjct: 439 GLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA---LVVFEYLQKSK 495
Query: 138 M-PSYVTYDILIEN-CSNNE-------FKSL------------VELVKDLRSRGLMNEAA 176
M P TY+I+IE C + F SL ++ +GL EA
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 177 KAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
M E P+ YN LI R + + ++ KEM GF ++ +IN L
Sbjct: 556 ALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Query: 237 HYVQMYNEKSWV 248
H ++ EKS++
Sbjct: 616 HDGRL--EKSYL 625
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 95/234 (40%), Gaps = 31/234 (13%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M + +S D SYN +I+ FCR +L A ++ +M + +
Sbjct: 98 LVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKM-----------MKLGY 146
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
D+ L SSL+NGY A +M + Y + ++ ++GL + +
Sbjct: 147 EPDIVTL---SSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASE 203
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A + M+ C P TY +V L RG ++ A M
Sbjct: 204 AVALIDRMVARGC--QPDLFTYGT---------------VVNGLCKRGDIDLALSLLKKM 246
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+G + D +Y +I C NV+ A +++ EM + G P++ + +LI L
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 110/249 (44%), Gaps = 42/249 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK----------------CNW-- 52
M + D V +NT+I C+ + A +L +EM+ K C++
Sbjct: 251 MEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGR 310
Query: 53 WLDKDVHISLMEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
W D +S M + ++P +++LI+ ++ EG F A Y +M++ D +Y
Sbjct: 311 WSDASQLLSDMIE-KKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYN 369
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+NG R AK+ FM+ CF P VTY+ LI+ C + + EL +++
Sbjct: 370 SLVNGFCMHDRLDKAKQMFEFMVSKDCF--PDVVTYNTLIKGFCKSKRVEDGTELFREMS 427
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
RGL+ + + T+++G +F C D A ++K+M+ G P +
Sbjct: 428 HRGLVGDTV-TYTTLIQG------------LFHDGDC---DNAQKVFKQMVSDGVPPDIM 471
Query: 228 SLIALINAL 236
+ L++ L
Sbjct: 472 TYSILLDGL 480
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 99/240 (41%), Gaps = 36/240 (15%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
PD V+YNT+I GFC+ + + +L REM H L+ D Y++LI
Sbjct: 398 PDVVTYNTLIKGFCKSKRVEDGTELFREMS-----------HRGLVGDTV---TYTTLIQ 443
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G +G+ A + +M+ G D +Y + ++GL + A E +M + +
Sbjct: 444 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IK 502
Query: 138 MPSYVTYDILIEN-CSNNE-------FKSLV------------ELVKDLRSRGLMNEAAK 177
+ Y+ Y +IE C + F SL ++ L S+ L+ EA
Sbjct: 503 LDIYI-YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 178 AHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALH 237
M E P+ YN LI H R + + ++ +EM F ++ + N LH
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 621
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 99/234 (42%), Gaps = 31/234 (13%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M + + +YN +I+ FCR ++ A L+ +M + L
Sbjct: 103 VVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKM-------------MKL 149
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
+ S + SSL+NGY A +M+ +GY D ++ ++GL + +
Sbjct: 150 GYEPSIV-TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A + M+ C P+ VTY +++ L RG + A + M
Sbjct: 209 AVALVDRMVQRGC--QPNLVTYGVVVNG---------------LCKRGDTDLALNLLNKM 251
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ D ++N +I C+ +VD A +++KEM G P++ + +LI+ L
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 103/248 (41%), Gaps = 36/248 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G P+ V+Y V++G C+ + A +L+ +M+A ++ DV I
Sbjct: 216 MVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAA---KIEADVVI---------- 262
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
++++I+ + A + EM G + +Y ++ L R DA + L M
Sbjct: 263 -FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL------------------ 171
I + P+ VT++ LI+ +F +L D+ R +
Sbjct: 322 IEKKI--NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHD 379
Query: 172 -MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
+++A + + M+ + PD YN LI C+ V+ ++++EM H G +
Sbjct: 380 RLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYT 439
Query: 231 ALINALHY 238
LI L +
Sbjct: 440 TLIQGLFH 447
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 106/249 (42%), Gaps = 42/249 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK----------------CNW-- 52
M + + P V YNT+I C + + A +L EMD K CN+
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 53 WLDKDVHISLMEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
W D +S M + ++P +S+LI+ ++ EG A Y EM++ D +Y
Sbjct: 307 WSDASRLLSDMIE-RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+NG R +AK MI CF P+ VTY+ LI+ C +EL +++
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCF--PNVVTYNTLIKGFCKAKRVDEGMELFREMS 423
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
RGL+ + T++ G F+ C D A ++K+M+ G P +
Sbjct: 424 QRGLVGNTV-TYTTLIHG------------FFQAREC---DNAQIVFKQMVSDGVLPDIM 467
Query: 228 SLIALINAL 236
+ L++ L
Sbjct: 468 TYSILLDGL 476
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 31/234 (13%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M +G+S + +Y+ +I+ FCR +L A ++ +M + +
Sbjct: 99 LVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKM-----------MKLGY 147
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
D+ L+ SL+NG+ A + +M+ +GY D ++ ++GL + R +
Sbjct: 148 EPDIVTLN---SLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASE 204
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A + M+ C P VTY I+ V L RG ++ A M
Sbjct: 205 AVALVDRMVVKGC--QPDLVTYGIV---------------VNGLCKRGDIDLALSLLKKM 247
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+G +P +YN +I C NV+ A +++ EM + G P++ + +LI L
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 38/241 (15%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
P+ V+YNT+I GFC+ + + + +L REM + L+ + Y++LI+
Sbjct: 394 PNVVTYNTLIKGFCKAKRVDEGMELFREMSQR-----------GLVGNTV---TYTTLIH 439
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G+ A + +M+ G D +Y + ++GL + A L+ Y Q +
Sbjct: 440 GFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA---LVVFEYLQRSK 496
Query: 138 M-PSYVTYDILIEN-CSNNEFKSLVELVKDLR-------------------SRGLMNEAA 176
M P TY+I+IE C + + +L L +GL EA
Sbjct: 497 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 556
Query: 177 KAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
M E PD YN LI H R + + ++ +EM F ++ + N L
Sbjct: 557 ALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNML 616
Query: 237 H 237
H
Sbjct: 617 H 617
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 106/245 (43%), Gaps = 36/245 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G P+ V+Y V++ C+ + A +L+R+M+ + N LD
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDA-------------V 264
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YS +I+G +G+ A+ + EM G+ +D +Y + G R D + L M
Sbjct: 265 KYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL------------------ 171
I + P+ VT+ +LI++ + + +L+K++ RG+
Sbjct: 325 IKRKI--SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKEN 382
Query: 172 -MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
+ EA + D M+ PD +N+LI +C+ +D ++++EM G + +
Sbjct: 383 RLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYN 442
Query: 231 ALINA 235
L+
Sbjct: 443 TLVQG 447
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 46/251 (18%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK----------------CNW-- 52
M E + D V Y+ +I G C+ L A++L EM+ K CN
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 53 WLDKDVHISLMEDL--SYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDS 106
W D L+ D+ + P +S LI+ ++ EG + A EM++ G + + +
Sbjct: 314 W---DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTIT 370
Query: 107 YCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKD 165
Y ++G K+ R +A + + MI C P +T++ILI C N +EL ++
Sbjct: 371 YNSLIDGFCKENRLEEAIQMVDLMISKGCD--PDIMTFNILINGYCKANRIDDGLELFRE 428
Query: 166 LRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPH 225
+ RG++ + YN L+ C+ ++ A +++EM+ P
Sbjct: 429 MSLRGVI----------------ANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPD 472
Query: 226 MFSLIALINAL 236
+ S L++ L
Sbjct: 473 IVSYKILLDGL 483
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 38/246 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G++P+ ++YN++I GFC+ L +A ++ M +K D D+
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK---GCDPDIM----------- 404
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
++ LINGY + EM G ++ +Y + G + + AK+ M
Sbjct: 405 TFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEM 464
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL-------------MNEAA 176
+ + P V+Y IL++ C N E + +E+ + + M A+
Sbjct: 465 VSRRV--RPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 177 KAHDTM-------LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
K D L+G K D YN++I E CR ++ KA ++++M G AP +
Sbjct: 523 KVDDAWDLFCSLPLKG-VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 230 IALINA 235
LI A
Sbjct: 582 NILIRA 587
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 101/246 (41%), Gaps = 42/246 (17%)
Query: 13 EMGLSPDGVSYNTVISGF---CRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
++G PD V +NT+++G CR+ E + D M EM K L
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHK-----------------PTL 193
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
++L+NG G A M+ G+ + +Y +N + K +T A E LL
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME-LLR 252
Query: 130 MIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLM---------------- 172
+ ++ ++ + V Y I+I+ C + + L ++ +G
Sbjct: 253 KMEERNIKLDA-VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311
Query: 173 ---NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
++ AK M++ P+ +++LI + + +A + KEMM G AP+ +
Sbjct: 312 GRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITY 371
Query: 230 IALINA 235
+LI+
Sbjct: 372 NSLIDG 377
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 117/268 (43%), Gaps = 45/268 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK----------------CNWWL 54
M GL P +Y ++I G+CR + +R+ Y+L+ EM + C+
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSG- 431
Query: 55 DKDVHISLMEDL--SYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
D D ++++++ S P Y++LI +L F A EM G + D Y
Sbjct: 432 DLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYN 491
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+ GLSK R +A+ +L+ M+ + P+ TY I +EF S + VK++R
Sbjct: 492 SLIIGLSKAKRMDEARSFLVEMVENGL--KPNAFTYGAFISGYIEASEFASADKYVKEMR 549
Query: 168 S----------RGLMN---------EAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVD 208
GL+N EA A+ +M++ D Y +L+ + VD
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609
Query: 209 KAYDMYKEMMHYGFAPHMFSLIALINAL 236
A ++++EM G AP +FS LIN
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGF 637
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 96/230 (41%), Gaps = 31/230 (13%)
Query: 6 SYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMED 65
S+ M E GL P+ +Y ISG+ E A ++EM +C +K +
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM-RECGVLPNKVL------- 559
Query: 66 LSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKE 125
+ LIN Y +G A + Y M+ G D +Y + MNGL K + DA+E
Sbjct: 560 ------CTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 126 YLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEG 185
M P +Y +LI N F L G M +A+ D M+E
Sbjct: 614 IFREMRGKGI--APDVFSYGVLI-----NGFSKL----------GNMQKASSIFDEMVEE 656
Query: 186 NYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
P+ +YN+L+ CR ++KA ++ EM G P+ + +I+
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 103/230 (44%), Gaps = 38/230 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E GL+P+ + YN ++ GFCR E+ KA +L+ EM K +H + +
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV-------KGLHPNAV------- 698
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y ++I+GY G+ A+ + EM G D Y ++G R D + +
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC---CRLNDVERAITIF 755
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFK-SLVELVKDLRSRGLMNEAAKAHDTMLEGNY-- 187
++ S ++ LI N FK EL ++ +R +++G++
Sbjct: 756 GTNKKGCASSTAPFNALI----NWVFKFGKTELKTEVLNR------------LMDGSFDR 799
Query: 188 --KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
KP+ YN++I C+ N++ A +++ +M + P + + +L+N
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 100/257 (38%), Gaps = 37/257 (14%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
GL P +Y+ +I G C+I+ L A L+ EMD+ + D H YS
Sbjct: 272 GLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDS---LGVSLDNH-----------TYSL 317
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
LI+G L N A EM+ G + Y + +SK+ AK MI
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 135 CFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSR-------------------GLMNE 174
+P Y LIE C + EL+ +++ R G ++
Sbjct: 378 L--IPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDG 435
Query: 175 AAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
A M+ +P+ +Y LI + A + KEM G AP +F +LI
Sbjct: 436 AYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII 495
Query: 235 ALHYVQMYNE-KSWVIE 250
L + +E +S+++E
Sbjct: 496 GLSKAKRMDEARSFLVE 512
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 106/259 (40%), Gaps = 32/259 (12%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDK--DVHISLMED--- 65
M E G D V+ N ++ G C EL KA ++++ M + L + +I L++D
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLI 516
Query: 66 ----LSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTR 121
L L YS+L+NG G F A + EM+ D +Y +F++ K+ +
Sbjct: 517 ENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKIS 576
Query: 122 DAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAH-- 179
A L M C + S TY+ LI G+ N+ + H
Sbjct: 577 SAFRVLKDMEKKGCHK--SLETYNSLI------------------LGLGIKNQIFEIHGL 616
Query: 180 -DTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHY 238
D M E P+ YN I C V+ A ++ EMM AP++FS LI A
Sbjct: 617 MDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCK 676
Query: 239 VQMYNEKSWVIESTLRSCN 257
V ++ V E+ + C
Sbjct: 677 VPDFDMAQEVFETAVSICG 695
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 117/286 (40%), Gaps = 48/286 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E GL PD V++N+ IS C+ ++ A + +M+ L + I+
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT--------- 293
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ ++ G+ G + A T + + + SY +++ GL + + +A E +L
Sbjct: 294 -YNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA-ETVLKQ 351
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ D+ PS +Y+IL++ L G++++A M PD
Sbjct: 352 MTDKGIG-PSIYSYNILMDG---------------LCKLGMLSDAKTIVGLMKRNGVCPD 395
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
Y L+ +C VD A + +EMM P+ ++ L+++L W +
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSL----------WKMG 445
Query: 251 STLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEIAMDGLLLDG 296
SE ++L K+N K Y L V I +DGL G
Sbjct: 446 RI--------SEAEELLRKMNEKG---YGLDTVTCNIIVDGLCGSG 480
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 33/241 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E + P+ +YN +++G+C++ + +A N ++ K V L D
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEA-----------NQYVSKIVEAGLDPDFF--- 254
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+SLI GY + A+ + EM G + +Y ++GL R +A + + M
Sbjct: 255 TYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKM 314
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKS-LVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
D+CF P+ TY +LI++ +E KS + LVK++ G+ KP
Sbjct: 315 KDDECF--PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGI----------------KP 356
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVI 249
+ Y +LI C +KA ++ +M+ G P++ + ALIN M + V+
Sbjct: 357 NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 250 E 250
E
Sbjct: 417 E 417
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 127/303 (41%), Gaps = 52/303 (17%)
Query: 6 SYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK-CNW------------ 52
Y + + E GL PD +Y ++I G+C+ ++L A+ + EM K C
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGL 298
Query: 53 ----WLDK--DVHISLMEDLSY--LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDF 104
+D+ D+ + + +D + + Y+ LI A EM G +
Sbjct: 299 CVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 105 DSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELV 163
+Y + ++ L + + A+E L M+ MP+ +TY+ LI C + V++V
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGL--MPNVITYNALINGYCKRGMIEDAVDVV 416
Query: 164 KDLRSRGLM------NEAAKAH------------DTMLEGNYKPDGAVYNLLIFEHCRCL 205
+ + SR L NE K + + MLE PD YN LI CR
Sbjct: 417 ELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSG 476
Query: 206 NVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIESTLRSCNLNDSELRK 265
N D AY + M G P ++ ++I++L KS +E +C+L DS +K
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLC-------KSKRVE---EACDLFDSLEQK 526
Query: 266 VLN 268
+N
Sbjct: 527 GVN 529
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 117/300 (39%), Gaps = 77/300 (25%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK------------CNWWLDKDV 58
M E GL P+ ++YN +I+G+C+ + A D++ M+++ + +V
Sbjct: 384 MLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNV 443
Query: 59 HISL--------MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLG-------YSSD 103
H ++ + L + Y+SLI+G GNF AY M G Y+S
Sbjct: 444 HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM 503
Query: 104 FDSYC----------LF------------------MNGLSKKARTRDAKEYLLFMIYDQC 135
DS C LF ++G K + +A L M+ C
Sbjct: 504 IDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNC 563
Query: 136 FRMPSYVTYDILIEN-CSNNEFK--SLVE-----------------LVKDLRSRGLMNEA 175
+P+ +T++ LI C++ + K +L+E L+ L G + A
Sbjct: 564 --LPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 176 AKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
ML KPD Y I +CR + A DM +M G +P +F+ +LI
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 104/246 (42%), Gaps = 37/246 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G+ P+ +Y +I C + KA +L+ +M L+K + +++
Sbjct: 349 MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM-------LEKGLMPNVIT------ 395
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LINGY G + A M S + +Y + G K + A L M
Sbjct: 396 -YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKM 453
Query: 131 IYDQCFRMPSYVTYDILIE-NCSNNEFKSLVELVKDLRSRGLM----------------- 172
+ + +P VTY+ LI+ C + F S L+ + RGL+
Sbjct: 454 LERKV--LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSK 511
Query: 173 --NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
EA D++ + P+ +Y LI +C+ VD+A+ M ++M+ P+ +
Sbjct: 512 RVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFN 571
Query: 231 ALINAL 236
ALI+ L
Sbjct: 572 ALIHGL 577
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY 68
T M + G+ PD ++Y+ +I FCR A L+R+M +++ ++ ++
Sbjct: 100 TEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM-------IERQINPDVV----- 147
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
+S+LIN + EG A Y +MLR G +Y ++G K+ R DAK L
Sbjct: 148 --TFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLD 205
Query: 129 FMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
M C P VT+ LI C + +E+ ++ RG++
Sbjct: 206 SMASKSC--SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV--------------- 248
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ Y LI C+ ++D A D+ M+ G AP+ + +++ +L
Sbjct: 249 -ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASL 296
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 41/267 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFC---RIEELRKAYDLMRE---------MDAKCNWWLDKDV 58
M E G PD V++ T+++G C R+ + D M E ++ C D +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMG-DTES 59
Query: 59 HISLMEDL------SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMN 112
++L+ + +++ Y+++I+ +G+ A + EM G D +Y ++
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 113 GLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL 171
+ R DA++ L MI Q P VT+ LI + E+ D+ RG+
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQI--NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 172 -------------------MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYD 212
+N+A + D+M + PD ++ LI +C+ VD +
Sbjct: 178 FPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGME 237
Query: 213 MYKEMMHYGFAPHMFSLIALINALHYV 239
++ EM G + + LI+ V
Sbjct: 238 IFCEMHRRGIVANTVTYTTLIHGFCQV 264
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 94/226 (41%), Gaps = 34/226 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M GL PD ++Y T+I GFCR ++ A ++ +EMD LD+
Sbjct: 406 MIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQN-GIELDR-------------V 451
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+S+L+ G EG A EMLR G D +Y + M+ KK + + L M
Sbjct: 452 GFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEM 511
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
D +PS VTY++L+ L +L G M A D ML PD
Sbjct: 512 QSDG--HVPSVVTYNVLLN--------GLCKL-------GQMKNADMLLDAMLNIGVVPD 554
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
YN L+ H R N K Y E+ G + S +++N L
Sbjct: 555 DITYNTLLEGHHRHANSSKRYIQKPEI---GIVADLASYKSIVNEL 597
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 111/268 (41%), Gaps = 45/268 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDL---- 66
+T+ L P VS+NT+I+G+C++ L + + L +M+ K D + +L+ L
Sbjct: 266 ITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME-KSRTRPDVFTYSALINALCKEN 324
Query: 67 --------------SYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
L P +++LI+G+ G + Y +ML G D Y
Sbjct: 325 KMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYN 384
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+NG K A+ + MI + R P +TY LI+ C + ++ +E+ K++
Sbjct: 385 TLVNGFCKNGDLVAARNIVDGMIR-RGLR-PDKITYTTLIDGFCRGGDVETALEIRKEMD 442
Query: 168 SRGL-------------------MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVD 208
G+ + +A +A ML KPD Y +++ C+ +
Sbjct: 443 QNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQ 502
Query: 209 KAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ + KEM G P + + L+N L
Sbjct: 503 TGFKLLKEMQSDGHVPSVVTYNVLLNGL 530
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 37/239 (15%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G D + N ++ G C +L +A+ + +E+ + +M+ +SY ++
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG----------CVMDRVSY----NT 545
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
LI+G + A+ F EM++ G D +Y + + GL + +A ++ +D
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF-----WDD 600
Query: 135 CFR---MPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
C R +P TY ++I+ C E E + D M+ N +P+
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNT 645
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
VYN LI +CR + A ++ ++M H G +P+ + +LI + + E + E
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G D VSYNT+ISG C ++L +A+ +LD+ V L D +Y YS
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAF-----------MFLDEMVKRGLKPD-NY--TYSI 580
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
LI G + A F+ + R G D +Y + ++G K RT + +E+ M+
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 135 CFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAV 193
P+ V Y+ LI C + +EL +D++ +G+ P+ A
Sbjct: 641 V--QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI----------------SPNSAT 682
Query: 194 YNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
Y LI V++A +++EM G P++F ALI+
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 37/222 (16%)
Query: 15 GLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDP 71
G+SPD + T I+ FC+ +EE K + M E N +
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPN-----------------VVT 297
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
++++I+G G + A+ F +M+ G +Y + + GL++ R DA ++L +
Sbjct: 298 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY-FVLKEM 356
Query: 132 YDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
+ F P+ + Y+ LI+ S +E G +N+A + D M+
Sbjct: 357 TKKGFP-PNVIVYNNLID--------SFIEA-------GSLNKAIEIKDLMVSKGLSLTS 400
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALI 233
+ YN LI +C+ D A + KEM+ GF + S ++I
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 103/239 (43%), Gaps = 37/239 (15%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G D + N ++ G C +L +A+ + +E+ + +M+ +SY ++
Sbjct: 500 GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG----------CVMDRVSY----NT 545
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
LI+G + A+ F EM++ G D +Y + + GL + +A ++ +D
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF-----WDD 600
Query: 135 CFR---MPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
C R +P TY ++I+ C E E + D M+ N +P+
Sbjct: 601 CKRNGMLPDVYTYSVMIDGCCKAE---------------RTEEGQEFFDEMMSKNVQPNT 645
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
VYN LI +CR + A ++ ++M H G +P+ + +LI + + E + E
Sbjct: 646 VVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 98/222 (44%), Gaps = 33/222 (14%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G D VSYNT+ISG C ++L +A+ +LD+ V L D +Y YS
Sbjct: 535 GCVMDRVSYNTLISGCCGKKKLDEAF-----------MFLDEMVKRGLKPD-NY--TYSI 580
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
LI G + A F+ + R G D +Y + ++G K RT + +E+ M+
Sbjct: 581 LICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 135 CFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAV 193
P+ V Y+ LI C + +EL +D++ +G+ P+ A
Sbjct: 641 V--QPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI----------------SPNSAT 682
Query: 194 YNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
Y LI V++A +++EM G P++F ALI+
Sbjct: 683 YTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 724
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 96/222 (43%), Gaps = 37/222 (16%)
Query: 15 GLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDP 71
G+SPD + T I+ FC+ +EE K + M E N +
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPN-----------------VVT 297
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
++++I+G G + A+ F +M+ G +Y + + GL++ R DA ++L +
Sbjct: 298 FNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAY-FVLKEM 356
Query: 132 YDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
+ F P+ + Y+ LI+ S +E G +N+A + D M+
Sbjct: 357 TKKGFP-PNVIVYNNLID--------SFIEA-------GSLNKAIEIKDLMVSKGLSLTS 400
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALI 233
+ YN LI +C+ D A + KEM+ GF + S ++I
Sbjct: 401 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI 442
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G P+ V+Y V++ C+ + A +L+R+M+ + N LD
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEER-NIKLDAV------------- 264
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YS +I+G G+ A+ + EM G +++ +Y + + G R D + L M
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
I + P+ VT+ +LI++ VK+ G + EA + H M+ PD
Sbjct: 325 IKRKI--NPNVVTFSVLIDS-----------FVKE----GKLREAEELHKEMIHRGIAPD 367
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
Y LI C+ ++DKA M M+ G P++ + LIN
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 98/226 (43%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M+ G+ D V+YNT+I GFC + +L A +L +EM + + V +++
Sbjct: 429 MSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM-------VSRKVPPNIV------- 474
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y L++G G + A + ++ + D Y + ++G+ ++ DA + LF
Sbjct: 475 TYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA--WDLFC 532
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
P TY+I+I L +G ++EA M E + PD
Sbjct: 533 SLPLKGVKPGVKTYNIMIGG---------------LCKKGPLSEAELLFRKMEEDGHAPD 577
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
G YN+LI H + K+ + +E+ GF+ ++ +I+ L
Sbjct: 578 GWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 103/246 (41%), Gaps = 36/246 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + ++P+ V+++ +I F + +LR+A +L +EM +H + D
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-----------IHRGIAPDTI--- 369
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+SLI+G+ E + A M+ G + ++ + +NG K R D E LF
Sbjct: 370 TYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLE--LFR 427
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSR-------------------G 170
+ VTY+ LI+ C + EL +++ SR G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
+A + + + + + D +YN++I C VD A+D++ + G P + +
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 231 ALINAL 236
+I L
Sbjct: 548 IMIGGL 553
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 19/184 (10%)
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
+S+LING EG A M+ +G+ D + +NGL + +A + M+
Sbjct: 161 FSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV 220
Query: 132 YDQCFRMPSYVTYD-ILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
C P+ VTY +L C + + +EL++ + R N K D
Sbjct: 221 EYGC--QPNAVTYGPVLNVMCKSGQTALAMELLRKMEER----------------NIKLD 262
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
Y+++I C+ ++D A++++ EM G ++ + LI +++ + ++
Sbjct: 263 AVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLR 322
Query: 251 STLR 254
++
Sbjct: 323 DMIK 326
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 117/270 (43%), Gaps = 41/270 (15%)
Query: 8 NTVMTEM---GLSPDGVSYNTVISGFCRIEELRKAYDLMREM-DAKCNWWLDKDVHISLM 63
N ++ EM G P+ V+YN +I + R L++A ++ +M +A C D+
Sbjct: 379 NKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCE--PDRVT----- 431
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
Y +LI+ + G +A Y M G S D +Y + +N L K A
Sbjct: 432 --------YCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIE-NCSNNEFKSLVELVKDLRSRGL----------- 171
M+ C P+ VT++I+I + +++ ++L +D+++ G
Sbjct: 484 HRLFCEMVGQGC--TPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVM 541
Query: 172 --------MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFA 223
+ EA M N+ PD VY LL+ + NVDKA+ Y+ M+ G
Sbjct: 542 EVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLR 601
Query: 224 PHMFSLIALINALHYVQMYNEKSWVIESTL 253
P++ + +L++ V +E +++S L
Sbjct: 602 PNVPTCNSLLSTFLRVHRMSEAYNLLQSML 631
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 23/162 (14%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G+ PD V NT++ G C I + +A+ L++EMD ++ D D++ Y+
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM---MSINPD-------DVT----YNC 507
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
L+ G EG F+ A EM R G D SY ++G SKK T+ A FM+ D+
Sbjct: 508 LMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHA-----FMVRDE 562
Query: 135 CFRM---PSYVTYDILIENCSNNEFKSLV-ELVKDLRSRGLM 172
+ P+ +TY+ L++ S N+ L EL+++++S G++
Sbjct: 563 MLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIV 604
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%), Gaps = 40/253 (15%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK------------CNWWLDKD 57
+M G+ P V+YNT++ GF + A ++ EM +K +W ++
Sbjct: 250 IMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG 309
Query: 58 VHISLMEDLSYLD------PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFM 111
++ ++ + Y+ LI G G+ ++A+ + EM++ G F +Y +
Sbjct: 310 RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLI 369
Query: 112 NGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRG 170
+GL + + +A E L+ I ++ + S VTY+ILI C + + K L ++ + G
Sbjct: 370 HGLFMENKI-EAAEILIREIREKGIVLDS-VTYNILINGYCQHGDAKKAFALHDEMMTDG 427
Query: 171 LM-------------------NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAY 211
+ EA + + ++ KPD + N L+ HC N+D+A+
Sbjct: 428 IQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAF 487
Query: 212 DMYKEMMHYGFAP 224
+ KEM P
Sbjct: 488 SLLKEMDMMSINP 500
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 113/283 (39%), Gaps = 68/283 (24%)
Query: 6 SYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMED 65
+Y M + G+ P +YNT+I G ++ A L+RE+ K LD
Sbjct: 348 AYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK-GIVLDSVT------- 399
Query: 66 LSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKE 125
Y+ LINGY G+ + A+ + EM+ G +Y + L +K +TR+A E
Sbjct: 400 ------YNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADE 453
Query: 126 YL-----------LFMI------------YDQCFRM----------PSYVTYDILIEN-C 151
L M+ D+ F + P VTY+ L+ C
Sbjct: 454 LFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLC 513
Query: 152 SNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAY 211
+F+ EL+ +++ RG+ KPD YN LI + + + A+
Sbjct: 514 GEGKFEEARELMGEMKRRGI----------------KPDHISYNTLISGYSKKGDTKHAF 557
Query: 212 DMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIESTLR 254
+ EM+ GF P + + AL+ L N++ + E LR
Sbjct: 558 MVRDEMLSLGFNPTLLTYNALLKGLS----KNQEGELAEELLR 596
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 73/147 (49%), Gaps = 16/147 (10%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M M ++PD V+YN ++ G C + +A +LM EM + K HIS
Sbjct: 493 MDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG----IKPDHIS--------- 539
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LI+GY +G+ + A+ EML LG++ +Y + GLSK A+E L M
Sbjct: 540 -YNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREM 598
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFK 157
+ +P+ ++ +IE SN + K
Sbjct: 599 KSEGI--VPNDSSFCSVIEAMSNLDAK 623
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 47/251 (18%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
VM + PD V+YNT+I G+C+ + +KA + +R+M+ + + DK ++++++ Y
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGH-EADKITYMTMIQ-ACYA 304
Query: 70 D-----------------------PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDS 106
D +S +I G EG YT + M+R G +
Sbjct: 305 DSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAI 364
Query: 107 YCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVE---- 161
Y + ++G +K DA L MI D+ F+ P VTY +++ C N + ++
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMI-DEGFK-PDVVTYSVVVNGLCKNGRVEEALDYFHT 422
Query: 162 ---------------LVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLN 206
L+ L G ++EA + + M E D YN LI +
Sbjct: 423 CRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRK 482
Query: 207 VDKAYDMYKEM 217
VD+A ++K M
Sbjct: 483 VDEAIALFKRM 493
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 101/249 (40%), Gaps = 36/249 (14%)
Query: 7 YNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDL 66
++ + E+ +P+ VSY+ +I G C + L +A+ L +M K +
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTR---------- 302
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
Y+ LI G A+ + EM+ G + +Y + ++GL + + +A
Sbjct: 303 ----TYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGV 358
Query: 127 LLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRG----------LMN-- 173
M+ D+ F PS +TY+ LI C + EL+ + R LM
Sbjct: 359 CRKMVKDRIF--PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGL 416
Query: 174 -------EAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHM 226
+A ML+ PD YN+LI CR +++ AY + M + P
Sbjct: 417 CRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDC 476
Query: 227 FSLIALINA 235
+ A+INA
Sbjct: 477 LTFTAIINA 485
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 101/243 (41%), Gaps = 32/243 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + GLSPD VSYN +I G CR + AY L+ M+ + ++ D
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNC---FDIEPDCL----------- 477
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
++++IN + +G VA F MLR G S D + ++G+ K +TRDA L +
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETL 537
Query: 131 IYDQCFRMPSY--VTYDILIENCSNNEFKSLV----------------ELVKDLRSRGLM 172
+ + P V D+L + C E +++ LV L G +
Sbjct: 538 VKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597
Query: 173 NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIAL 232
+ + + M P+ Y ++I C+ V++A + M G +P+ + +
Sbjct: 598 TGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVM 657
Query: 233 INA 235
+
Sbjct: 658 VKG 660
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 16/165 (9%)
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
Y +++N G + A F ++L++G+ D + G + RDA + M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVM- 256
Query: 132 YDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
+ P+ V+Y ILI L E+ G + EA D M E +P
Sbjct: 257 SKEVTCAPNSVSYSILIHG--------LCEV-------GRLEEAFGLKDQMGEKGCQPST 301
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
Y +LI C +DKA++++ EM+ G P++ + LI+ L
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGL 346
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 111/255 (43%), Gaps = 35/255 (13%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
+V M +MG+SP +++N+++S + A+DL EM + + + D
Sbjct: 157 SVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEM--RRTYGVTPD------ 208
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
SY +++LING+ A+ + +M + D +Y ++GL + + + A
Sbjct: 209 ---SY--TFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIA 263
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEA------- 175
L M+ P+ V+Y L+ C E V + D+ SRGL A
Sbjct: 264 HNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI 323
Query: 176 ---AKAH------DTMLEGN-----YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYG 221
++AH D ++ GN + PD +N+LI HC ++D A +++EM++
Sbjct: 324 KGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 383
Query: 222 FAPHMFSLIALINAL 236
P S LI L
Sbjct: 384 LHPDSASYSVLIRTL 398
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 92/207 (44%), Gaps = 39/207 (18%)
Query: 17 SPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLI 76
+PD V+YNT+I G CR +++ A++++ M K DVH +++ Y++L+
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT-----DVHPNVVS-------YTTLV 288
Query: 77 NGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL-----FMI 131
GY + A + +ML G + +Y + GLS+ R + K+ L+ F
Sbjct: 289 RGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTT 348
Query: 132 YDQCFRMPSYVTYDILIE-NCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ P T++ILI+ +C G ++ A K ML PD
Sbjct: 349 F-----APDACTFNILIKAHCDA----------------GHLDAAMKVFQEMLNMKLHPD 387
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEM 217
A Y++LI C D+A ++ E+
Sbjct: 388 SASYSVLIRTLCMRNEFDRAETLFNEL 414
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 41/272 (15%)
Query: 6 SYNTVMTEM---GLSPDGVSYNTVISGFCRIEELRKAYDLMREM-DAKCNWWLDKDVHIS 61
+ N ++ EM G P+ V+YN +I + R L +A ++ +M +A C K ++
Sbjct: 382 AINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC-----KPDRVT 436
Query: 62 LMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTR 121
Y +LI+ + G +A Y M G S D +Y + +N L K
Sbjct: 437 ----------YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLP 486
Query: 122 DAKEYLLFMIYDQCFRMPSYVTYDILIE-NCSNNEFKSLVELVKDLRSRGL--------- 171
A + M+ C P+ VTY+I+++ + +++ ++L +D+++ G
Sbjct: 487 AAHKLFCEMVDQGC--TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 172 ----------MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYG 221
+ EA M + N+ PD VY LL+ + NV+KA+ Y+ M+H G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 222 FAPHMFSLIALINALHYVQMYNEKSWVIESTL 253
P++ + +L++ V E ++++ L
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 17/146 (11%)
Query: 91 FYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN 150
FY + G+ D +Y + L + + + L M+ D C P+ VTY+ LI +
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--QPNTVTYNRLIHS 408
Query: 151 CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKA 210
+ +NEA + M E KPD Y LI H + +D A
Sbjct: 409 YGRANY---------------LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 211 YDMYKEMMHYGFAPHMFSLIALINAL 236
DMY+ M G +P F+ +IN L
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCL 479
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 105/243 (43%), Gaps = 36/243 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G PD V+Y V++ C+ A DL R+M+ ++++ S+++
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKME-------ERNIKASVVQ------ 247
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YS +I+ +G+F A + + EM G +D +Y + GL + D + L M
Sbjct: 248 -YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL------------------ 171
I +P VT+ LI+ + EL ++ +RG+
Sbjct: 307 IGRNI--IPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 172 -MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
++EA + D M+ +PD Y++LI +C+ VD +++E+ G P+ +
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 231 ALI 233
L+
Sbjct: 425 TLV 427
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 38/233 (16%)
Query: 7 YNTVMTEMGLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
YN ++T G++PD ++YN++I GFC+ + E + +DLM + C + D+
Sbjct: 338 YNEMITR-GIAPDTITYNSLIDGFCKENCLHEANQMFDLM--VSKGC----EPDIV---- 386
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
YS LIN Y + E+ G + +Y + G + + A
Sbjct: 387 -------TYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTML 183
KE M+ PS VTY IL++ +N G +N+A + + M
Sbjct: 440 KELFQEMVSRGV--PPSVVTYGILLDGLCDN---------------GELNKALEIFEKMQ 482
Query: 184 EGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ +YN++I C VD A+ ++ + G P + + +I L
Sbjct: 483 KSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 49/261 (18%)
Query: 13 EMGLSPDGVSYNTVISGFC---RIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
++G PD ++++T+++GFC R+ E D M EM + + L
Sbjct: 133 KLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPD-----------------L 175
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
S+LING +G A M+ G+ D +Y +N L K + A + LF
Sbjct: 176 VTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALD--LF 233
Query: 130 MIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLM---------------- 172
++ S V Y I+I++ C + F + L ++ +G+
Sbjct: 234 RKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCND 293
Query: 173 ---NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
++ AK M+ N PD ++ LI + + +A ++Y EM+ G AP +
Sbjct: 294 GKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITY 353
Query: 230 IALI------NALHYV-QMYN 243
+LI N LH QM++
Sbjct: 354 NSLIDGFCKENCLHEANQMFD 374
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
++ GL P+ ++YNT++ GFC+ +L A +L +EM + + V S++
Sbjct: 411 ISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEM-------VSRGVPPSVV------- 456
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y L++G G A + +M + + Y + ++G+ ++ DA + LF
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDA--WSLFC 514
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
P VTY+++I L +G ++EA M E PD
Sbjct: 515 SLSDKGVKPDVVTYNVMIGG---------------LCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
YN+LI H + + ++ +EM GF+ ++ +I+ L
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 94/228 (41%), Gaps = 35/228 (15%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M G PD V+Y+ +I+ +C+ + + L RE+ +K L+ +
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSK-----------GLIPNTI-- 421
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y++L+ G+ G A + EM+ G +Y + ++GL A E
Sbjct: 422 -TYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK 480
Query: 130 MIYDQCFRMPSYV-TYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
M Q RM + Y+I+I C+ ++ L L +G+
Sbjct: 481 M---QKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV---------------- 521
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
KPD YN++I C+ ++ +A ++++M G P F+ LI A
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 118/276 (42%), Gaps = 46/276 (16%)
Query: 11 MTEMGLSPDGV-----SYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMED 65
+ +MG+ DG+ SYN VI C+ + A + EM D+ + +L+
Sbjct: 413 LKQMGV--DGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQ-------DRGISPNLVT- 462
Query: 66 LSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA-- 123
+++ ++GY G+ + + ++L G+ D ++ L +N L + +DA
Sbjct: 463 ------FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFD 516
Query: 124 --KEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDT 181
KE L + I P+ +TY+ILI +C S G + + K
Sbjct: 517 CFKEMLEWGIE------PNEITYNILIRSCC---------------STGDTDRSVKLFAK 555
Query: 182 MLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQM 241
M E PD YN I C+ V KA ++ K M+ G P F+ LI AL
Sbjct: 556 MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 615
Query: 242 YNEKSWVIESTLRSCNLNDSELRKVLNKINVKERSI 277
+E + S R + DS ++++ ++++++ +
Sbjct: 616 ESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGL 651
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 41/270 (15%)
Query: 8 NTVMTEM---GLSPDGVSYNTVISGFCRIEELRKAYDLMREM-DAKCNWWLDKDVHISLM 63
N ++ EM G P+ V+YN +I + R L +A ++ +M +A C K ++
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC-----KPDRVT-- 436
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
Y +LI+ + G +A Y M G S D +Y + +N L K A
Sbjct: 437 --------YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIE-NCSNNEFKSLVELVKDLRSRGL----------- 171
+ M+ C P+ VTY+I+++ + +++ ++L +D+++ G
Sbjct: 489 HKLFCEMVDQGC--TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 172 --------MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFA 223
+ EA M + N+ PD VY LL+ + NV+KA+ Y+ M+H G
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 224 PHMFSLIALINALHYVQMYNEKSWVIESTL 253
P++ + +L++ V E ++++ L
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 17/146 (11%)
Query: 91 FYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN 150
FY + G+ D +Y + L + + + L M+ D C P+ VTY+ LI +
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--QPNTVTYNRLIHS 408
Query: 151 CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKA 210
+ +NEA + M E KPD Y LI H + +D A
Sbjct: 409 YGRANY---------------LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 211 YDMYKEMMHYGFAPHMFSLIALINAL 236
DMY+ M G +P F+ +IN L
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCL 479
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 41/270 (15%)
Query: 8 NTVMTEM---GLSPDGVSYNTVISGFCRIEELRKAYDLMREM-DAKCNWWLDKDVHISLM 63
N ++ EM G P+ V+YN +I + R L +A ++ +M +A C K ++
Sbjct: 384 NKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGC-----KPDRVT-- 436
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
Y +LI+ + G +A Y M G S D +Y + +N L K A
Sbjct: 437 --------YCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIE-NCSNNEFKSLVELVKDLRSRGL----------- 171
+ M+ C P+ VTY+I+++ + +++ ++L +D+++ G
Sbjct: 489 HKLFCEMVDQGC--TPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 546
Query: 172 --------MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFA 223
+ EA M + N+ PD VY LL+ + NV+KA+ Y+ M+H G
Sbjct: 547 EVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLR 606
Query: 224 PHMFSLIALINALHYVQMYNEKSWVIESTL 253
P++ + +L++ V E ++++ L
Sbjct: 607 PNVPTCNSLLSTFLRVNKIAEAYELLQNML 636
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 60/146 (41%), Gaps = 17/146 (11%)
Query: 91 FYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN 150
FY + G+ D +Y + L + + + L M+ D C P+ VTY+ LI +
Sbjct: 351 FYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC--QPNTVTYNRLIHS 408
Query: 151 CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKA 210
+ +NEA + M E KPD Y LI H + +D A
Sbjct: 409 YGRANY---------------LNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIA 453
Query: 211 YDMYKEMMHYGFAPHMFSLIALINAL 236
DMY+ M G +P F+ +IN L
Sbjct: 454 MDMYQRMQAGGLSPDTFTYSVIINCL 479
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 116/277 (41%), Gaps = 56/277 (20%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMD----------------AKCN--W 52
M EMG+ PD V Y T+I C+ + A L +M+ CN
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227
Query: 53 WLDKDVHISLMEDLSY--LDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDS 106
W D D SL+ ++ + P +++LI+ ++ EG F A Y EM+R+ + + +
Sbjct: 228 WRDAD---SLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 107 YCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKD 165
Y +NG + +A++ M CF P V Y LI C + +++ +
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCF--PDVVAYTSLINGFCKCKKVDDAMKIFYE 342
Query: 166 LRSRGLM-------------------NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLN 206
+ +GL N A + M+ P+ YN+L+ HC C N
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLL--HCLCYN 400
Query: 207 --VDKAYDMYKEMMHY---GFAPHMFSLIALINALHY 238
V KA ++++M G AP++++ L++ L Y
Sbjct: 401 GKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 44/266 (16%)
Query: 2 YITVSYNTVMTEMGLSPDGVSYNTVISGFC---RIEELRKAYDLMREMDAKCNWWLDKDV 58
Y+ S+ M ++G PD V++ ++I+GFC R+EE + M EM K DV
Sbjct: 124 YLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK------PDV 177
Query: 59 HISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKA 118
+ Y+++I+ G+ A + + +M G D Y +NGL
Sbjct: 178 VM-----------YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSG 226
Query: 119 RTRDAKEYLLFMIYDQCFRMPSYVTYDILIE---------------------NCSNNEFK 157
R RDA L M + P +T++ LI+ + + N F
Sbjct: 227 RWRDADSLLRGMTKRKI--KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIF- 283
Query: 158 SLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEM 217
+ L+ G ++EA + M PD Y LI C+C VD A ++ EM
Sbjct: 284 TYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEM 343
Query: 218 MHYGFAPHMFSLIALINALHYVQMYN 243
G + + LI V N
Sbjct: 344 SQKGLTGNTITYTTLIQGFGQVGKPN 369
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY 68
T M G+ P+ ++Y+++IS C E A L+ +M +++ ++ +++
Sbjct: 284 TEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM-------IERKINPNVVT---- 332
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
+++LI+ ++ EG A Y EM++ D +Y +NG R +AK
Sbjct: 333 ---FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 389
Query: 129 FMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
MI CF P+ VTY+ LI C VEL +++ RGL+
Sbjct: 390 LMISKDCF--PNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT------------ 435
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
Y LI + + D A ++K+M+ G P++ + L++ L
Sbjct: 436 ----VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 480
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 95/209 (45%), Gaps = 35/209 (16%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
P+ V+YNT+I+GFC+ + + + +L REM + L+ + Y++LI+
Sbjct: 398 PNVVTYNTLINGFCKAKRIDEGVELFREMSQR-----------GLVGNTV---TYTTLIH 443
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G+ + A + +M+ G + +Y ++GL K + A ++ Y Q +
Sbjct: 444 GFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA---MVVFEYLQRSK 500
Query: 138 M-PSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYN 195
M P+ TY+I+IE C + + +L L +G+ KPD +YN
Sbjct: 501 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV----------------KPDVIIYN 544
Query: 196 LLIFEHCRCLNVDKAYDMYKEMMHYGFAP 224
+I CR ++A ++++M G P
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLP 573
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 115/259 (44%), Gaps = 34/259 (13%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M +G+S + +YN +I+ FCR ++ A L+ +M + L
Sbjct: 103 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM-------------MKL 149
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
+ S + SSL+NGY A +M+ +GY D ++ ++GL + +
Sbjct: 150 GYEPSIV-TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDT 181
A + M+ C P+ VTY +++ C + L+ + EAAK
Sbjct: 209 AVALVDRMVQRGC--QPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-------EAAK---- 255
Query: 182 MLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQM 241
+E N +Y+ +I C+ + D A +++ EM + G P++ + +LI+ L +
Sbjct: 256 -IEANV----VIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYER 310
Query: 242 YNEKSWVIESTL-RSCNLN 259
+++ S ++ + R N N
Sbjct: 311 WSDASRLLSDMIERKINPN 329
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
++ G SP ++YNTVI G + + KA L+ EM AK D+ +
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAK-------DLKPDTIT------ 486
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YSSL+ G EG A F+ E R+G + ++ M GL K +T A ++L+FM
Sbjct: 487 -YSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFM 545
Query: 131 IYDQCFRMPSYVTYDILIENCS-NNEFKSLVELVKDLRSRGLMNEAA 176
I C P+ +Y ILIE + K +EL+ +L ++GLM +++
Sbjct: 546 INRGC--KPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSS 590
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 103/229 (44%), Gaps = 33/229 (14%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY 68
+V+ M +SPD V+YNT++ C +L++A +++ M L +D + ++
Sbjct: 193 SVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM-------LQRDCYPDVIT---- 241
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
Y+ LI + A EM G + D +Y + +NG+ K+ R +A ++L
Sbjct: 242 ---YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLN 298
Query: 129 FMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
M C P+ +T++I++ + CS + +L+ D ML +
Sbjct: 299 DMPSSGC--QPNVITHNIILRSMCSTGRWMDAEKLLAD----------------MLRKGF 340
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
P +N+LI CR + +A D+ ++M +G P+ S L++
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGF 389
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 102/242 (42%), Gaps = 39/242 (16%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G PD + T+I GFCR+ + RKA ++ ++ + D+ Y+
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGS-----------GAVPDVIT---YNV 177
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
+I+GY G A + + R+ S D +Y + L + + A E L M+
Sbjct: 178 MISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 135 CFRMPSYVTYDILIE-NCSNNEFKSLVELVKDLRSRGL-------------------MNE 174
C+ P +TY ILIE C ++ ++L+ ++R RG ++E
Sbjct: 235 CY--PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDE 292
Query: 175 AAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
A K + M +P+ +N+++ C A + +M+ GF+P + + LIN
Sbjct: 293 AIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILIN 352
Query: 235 AL 236
L
Sbjct: 353 FL 354
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 131/325 (40%), Gaps = 45/325 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK------------------CNW 52
M + G +PD V+YN +++G C+ L +A + +M +
Sbjct: 265 MRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGR 324
Query: 53 WLDKDVHISLMEDLSY---LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
W+D + ++ M + + ++ LIN +G A +M + G + SY
Sbjct: 325 WMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRS 168
++G K+ + A EYL M+ C+ P VTY+ ++ C + + + VE++ L S
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCY--PDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 169 RGL-------------------MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDK 209
+G +A K D M + KPD Y+ L+ R VD+
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 210 AYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEK-SWVIESTLRSCNLNDSELRKVLN 268
A + E G P+ + +++ L + + +++ R C N++ ++
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 269 KINVKERSIYPLLEVLAEIAMDGLL 293
+ E LE+L E+ GL+
Sbjct: 563 GL-AYEGMAKEALELLNELCNKGLM 586
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKC--------NWWLDKDVHISLMEDL 66
G+SP+ ++Y ++++G C+ + +A ++ EM K +D S ME
Sbjct: 614 GISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESA 673
Query: 67 SYL---------DP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNG 113
S L +P Y+SLI+G+ GN A Y +ML+ G D +Y ++G
Sbjct: 674 SALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDG 733
Query: 114 LSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMN 173
L K A E L+ +P + Y ++ V L +G
Sbjct: 734 LLKDGNLILASE--LYTEMQAVGLVPDEIIYTVI---------------VNGLSKKGQFV 776
Query: 174 EAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAP 224
+ K + M + N P+ +YN +I H R N+D+A+ ++ EM+ G P
Sbjct: 777 KVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 41/193 (21%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREM---DAKCNWWLDKDVHISLMEDLS 67
+ E GL+P YN++ISGF + + A DL ++M +C+
Sbjct: 680 LLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCD---------------- 723
Query: 68 YLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL 127
L Y++LI+G L +GN +A Y EM +G D Y + +NGLSKK +
Sbjct: 724 -LGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQ-------- 774
Query: 128 LFMIYDQCFR--MPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEG 185
F+ + F + VT ++LI N ++ G ++EA + HD ML+
Sbjct: 775 -FVKVVKMFEEMKKNNVTPNVLIYNA----------VIAGHYREGNLDEAFRLHDEMLDK 823
Query: 186 NYKPDGAVYNLLI 198
PDGA +++L+
Sbjct: 824 GILPDGATFDILV 836
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 92/226 (40%), Gaps = 30/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
MT + +GV Y T+I+G C++ + KA +L+ N +K + +S M
Sbjct: 539 MTSSNIEVNGVVYQTIINGLCKVGQTSKARELL------ANMIEEKRLCVSCMS------ 586
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+S+I+G+ EG A Y EM G S + +Y MNGL K R
Sbjct: 587 -YNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR----------- 634
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
DQ M D + + + L+ R M A+ +LE P
Sbjct: 635 -MDQALEM-----RDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+YN LI N+ A D+YK+M+ G + + LI+ L
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGL 734
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 102/246 (41%), Gaps = 45/246 (18%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREM-DAKC-----------------NWWLDK 56
G P+ V+YNT+I G C +L KA L+ M +KC D
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 57 DVHISLMEDLSY---LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNG 113
+S ME+ Y YS LI+G EG + A + + +M G + Y + ++G
Sbjct: 347 VRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDG 406
Query: 114 LSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIE---------------------NCS 152
L ++ + +AKE L MI C +P+ TY L++ CS
Sbjct: 407 LCREGKPNEAKEILNRMIASGC--LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCS 464
Query: 153 NNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYD 212
N+F V L+ L G + EA ML KPD Y+ +I C ++D A
Sbjct: 465 RNKFCYSV-LIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALK 523
Query: 213 MYKEMM 218
+Y EM+
Sbjct: 524 LYHEML 529
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 110/265 (41%), Gaps = 42/265 (15%)
Query: 14 MGLSPDGVSYNTVISGFCRIEELRKAYDLMREM-DAKCNWWLDKDVHISLMEDLS----- 67
M +SP+G+S+N VI C++ + +A ++ R M + KC D + +LM+ L
Sbjct: 181 MNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKC--LPDGYTYCTLMDGLCKEERI 238
Query: 68 -----YLDP------------YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLF 110
LD Y+ LI+G +G+ M G + +Y
Sbjct: 239 DEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTL 298
Query: 111 MNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRG 170
++GL K + A L M+ +C +P+ VTY LI LVK R+
Sbjct: 299 IHGLCLKGKLDKAVSLLERMVSSKC--IPNDVTYGTLING-----------LVKQRRA-- 343
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
+A + +M E Y + +Y++LI + ++A ++++M G P++
Sbjct: 344 --TDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYS 401
Query: 231 ALINALHYVQMYNEKSWVIESTLRS 255
L++ L NE ++ + S
Sbjct: 402 VLVDGLCREGKPNEAKEILNRMIAS 426
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 117/278 (42%), Gaps = 49/278 (17%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK-CNWWL-------- 54
VS M L PD SYNTVI GFC +EL KA +L EM C+W L
Sbjct: 161 AVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILID 220
Query: 55 ------DKDVHISLMEDLSYLD------PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSS 102
D + ++++ ++ Y+SLI G+ G + E+L G S
Sbjct: 221 AFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSP 280
Query: 103 DFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVE 161
+Y + G K + ++A E FMI ++ R P+ TY LI+ C + K ++
Sbjct: 281 CAITYNTLIRGFCKLGQLKEASEIFEFMI-ERGVR-PNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 162 L-------------------VKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHC 202
L + L GL+ +A + + M + +PD YN+L+ C
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 203 RCLNVDKA----YDMYKEMMHYGFAPHMFSLIALINAL 236
++D+A Y M K+ + P + S ALI+ L
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTD--PDVISYNALIHGL 434
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 86/219 (39%), Gaps = 35/219 (15%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS--L 75
PD +SYN +I G C+ L +A D ++ L+E L D ++ L
Sbjct: 422 PDVISYNALIHGLCKENRLHQALD----------------IYDLLVEKLGAGDRVTTNIL 465
Query: 76 INGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQC 135
+N L G+ A + ++ + D+Y ++G K AK L M +
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 136 FRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYN 195
PS Y NC L+ L G +++A + + M N PD +N
Sbjct: 526 --QPSVFDY-----NC----------LLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFN 568
Query: 196 LLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
++I + ++ A + M G +P +F+ LIN
Sbjct: 569 IMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLIN 607
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 98/236 (41%), Gaps = 31/236 (13%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY 68
+M + G + + ++N ++ G CR E KA L+REM SLM D+
Sbjct: 131 ALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN-----------SLMPDVF- 178
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
Y+++I G+ + A EM G S ++ + ++ K + +A +L
Sbjct: 179 --SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLK 236
Query: 129 FMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
M + + D+++ + SL+ D G ++ D +LE
Sbjct: 237 EMKF-------MGLEADLVV-------YTSLIRGFCDC---GELDRGKALFDEVLERGDS 279
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
P YN LI C+ + +A ++++ M+ G P++++ LI+ L V E
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKE 335
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 95/229 (41%), Gaps = 33/229 (14%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY 68
T M E G+ P+ ++YN +I FC A L+R M ++K ++ ++
Sbjct: 34 TEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHM-------IEKQINPDIV----- 81
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
+S+LIN ++ E A Y EMLR +Y ++G K+ R DAK L
Sbjct: 82 --TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLD 139
Query: 129 FMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
M C P VT+ LI C + +E+ ++ RG++
Sbjct: 140 SMASKGC--SPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV--------------- 182
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ Y LI C+ ++D A D+ EM+ G AP + ++ L
Sbjct: 183 -ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGL 230
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 128/295 (43%), Gaps = 40/295 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G PD V+YN++++G CR + A DL+R+M+ + + DV
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER---NVKADVF----------- 229
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YS++I+ +G A + + EM G S +Y + GL K + D L M
Sbjct: 230 TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM 289
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ + +P+ +T+++L++ VK+ G + EA + + M+ P+
Sbjct: 290 VSREI--VPNVITFNVLLD-----------VFVKE----GKLQEANELYKEMITRGISPN 332
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
YN L+ +C + +A +M M+ +P + + +LI V+ ++ V
Sbjct: 333 IITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFR 392
Query: 251 STLRSCNLNDSELRKVL-------NKINVKERSIYPLLE--VLAEIAMDGLLLDG 296
+ + + ++ +L KI + E ++ VL ++ G+LLDG
Sbjct: 393 NISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDG 447
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 47/269 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFC---RIEELRKAYDLMREMDAKCN------------WWLD 55
M G+SP+ ++YNT++ G+C R+ E DLM + KC+ + +
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM--VRNKCSPDIVTFTSLIKGYCMV 381
Query: 56 KDV--------HISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSY 107
K V +IS ++ YS L+ G+ G ++A + EM+ G D +Y
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 108 CLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSN-------NEFKSL 159
+ ++GL + A E +F + V Y +IE C N F SL
Sbjct: 442 GILLDGLCDNGKLEKALE--IFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 160 ------------VELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNV 207
++ L +G ++EA M E P+ YN LI H R ++
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 208 DKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ + +EM GF+ S+ +I+ L
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDML 588
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 31/223 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G + D V+YNT++ G C+ + L +A L EM + +L D SY
Sbjct: 436 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER-----------ALFPD-SY-- 481
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+ LI+G+ GN Q A + +M D +Y ++G K AKE M
Sbjct: 482 TLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADM 541
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ + +P+ ++Y IL V L S+G + EA + D M+ N KP
Sbjct: 542 VSKEI--LPTPISYSIL---------------VNALCSKGHLAEAFRVWDEMISKNIKPT 584
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALI 233
+ N +I +CR N ++M+ GF P S LI
Sbjct: 585 VMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 83/193 (43%), Gaps = 22/193 (11%)
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
Y++LI+ Y ++G + A+ M G+S +Y +NGL K + AKE M+
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332
Query: 132 YDQCFRMPSYVTY-DILIENCSNNEFKSLVELVKDLRSR-------------------GL 171
P TY +L+E C + ++ D+RSR G
Sbjct: 333 RSGL--SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 172 MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIA 231
+++A +++ E PD +Y +LI +CR + A ++ EM+ G A + +
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 232 LINALHYVQMYNE 244
+++ L +M E
Sbjct: 451 ILHGLCKRKMLGE 463
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 86/208 (41%), Gaps = 31/208 (14%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
P +SY+ +++ C L +A+ + EM + K++ ++M +S+I
Sbjct: 548 PTPISYSILVNALCSKGHLAEAFRVWDEM-------ISKNIKPTVM-------ICNSMIK 593
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
GY GN +F +M+ G+ D SY + G ++ A + M +Q
Sbjct: 594 GYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGL 653
Query: 138 MPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNL 196
+P TY+ ++ C N+ M EA M+E PD + Y
Sbjct: 654 VPDVFTYNSILHGFCRQNQ----------------MKEAEVVLRKMIERGVNPDRSTYTC 697
Query: 197 LIFEHCRCLNVDKAYDMYKEMMHYGFAP 224
+I N+ +A+ ++ EM+ GF+P
Sbjct: 698 MINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 23/116 (19%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK------------------CNW 52
M G PD +SYNT+I GF R E + KA+ L+++M+ + C
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 53 WLDKDVHISLMEDLSY-LDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSD 103
K+ + L + + ++P Y+ +ING++++ N A+ + EML+ G+S D
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 99/248 (39%), Gaps = 40/248 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWW-------------- 53
M GLSPD +Y +++ C+ + E K + MR D +
Sbjct: 331 MLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN 390
Query: 54 LDKDVHISLMEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
LDK + + L P Y+ LI GY +G VA EML+ G + D +Y
Sbjct: 391 LDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNT 450
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIE-NCSNNEFKSLVELVKDLRS 168
++GL K+ +A + M F P T ILI+ +C ++ +EL + ++
Sbjct: 451 ILHGLCKRKMLGEADKLFNEMTERALF--PDSYTLTILIDGHCKLGNLQNAMELFQKMK- 507
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
E + D YN L+ + ++D A +++ +M+ P S
Sbjct: 508 ---------------EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPIS 552
Query: 229 LIALINAL 236
L+NAL
Sbjct: 553 YSILVNAL 560
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 31/188 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
+ E+GL P+ YN++ISGF + ++ A DL ++M N + D+
Sbjct: 686 LPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM---VNDGISCDLFT---------- 732
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+++I+G L +GN +A Y E+L LG D + + +NGLSKK + A + L M
Sbjct: 733 -YTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
P+ + Y +I G +NEA + HD MLE D
Sbjct: 792 KKKDV--TPNVLLYSTVIAGH---------------HREGNLNEAFRLHDEMLEKGIVHD 834
Query: 191 GAVYNLLI 198
V+NLL+
Sbjct: 835 DTVFNLLV 842
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 120/299 (40%), Gaps = 47/299 (15%)
Query: 7 YNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM--- 63
+ VM+ G PDG+ ++ + C+ +L A DL+REM K ++ + S++
Sbjct: 262 FRRVMSR-GAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAF 320
Query: 64 -------EDLSYLD-------PYS-----SLINGYLAEGNFQVAYTFYCEMLRLGYSSDF 104
E + +D P S SL+NGY A + M G + D
Sbjct: 321 VKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDK 380
Query: 105 DSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRM-PSYVTYDILIENCSNNEF-KSLVEL 162
+ + + K A E+ + M + R+ PS V +I+ C E ++ +E+
Sbjct: 381 VMFSVMVEWFCKNMEMEKAIEFYMRM---KSVRIAPSSVLVHTMIQGCLKAESPEAALEI 437
Query: 163 VKD------------------LRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRC 204
D +G ++ A M + +P+ YN ++ HCR
Sbjct: 438 FNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM 497
Query: 205 LNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIESTLRSCNLNDSEL 263
N+D A ++ EM+ G P+ F+ LI+ + + +W + + + + N +E+
Sbjct: 498 KNMDLARSIFSEMLEKGLEPNNFTYSILIDGF-FKNKDEQNAWDVINQMNASNFEANEV 555
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 112/251 (44%), Gaps = 45/251 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E GL P+ +Y+ +I GF + ++ + A+D++ +M+A N+ ++ ++ +++ L +
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNA-SNFEANEVIYNTIINGLCKVG 568
Query: 71 P-----------------------YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSY 107
Y+S+I+G++ G+ A Y EM G S + ++
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 108 CLFMNGLSKKARTRDAKEYLLFMIYDQC-FRMPSYVTYDILIEN-CSNNEFKSLVELVKD 165
+NG K R A E M + +P+ Y LI+ C N+ K+ L +
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEMKSMELKLDLPA---YGALIDGFCKKNDMKTAYTLFSE 685
Query: 166 LRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPH 225
L GLM P+ +VYN LI +D A D+YK+M++ G +
Sbjct: 686 LPELGLM----------------PNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCD 729
Query: 226 MFSLIALINAL 236
+F+ +I+ L
Sbjct: 730 LFTYTTMIDGL 740
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 100/252 (39%), Gaps = 39/252 (15%)
Query: 21 VSYNTVISGFCRIEELRKAYDLMREMDAKCNWWL----------------DKDVHISLME 64
V YNT+I+G C++ + KA ++++ + + + + D D +
Sbjct: 555 VIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR 614
Query: 65 DLSY------LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKA 118
++S + ++SLING+ +A EM + D +Y ++G KK
Sbjct: 615 EMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKN 674
Query: 119 RTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKA 178
+ A Y LF + MP+ Y+ LI R+ G M+ A
Sbjct: 675 DMKTA--YTLFSELPELGLMPNVSVYNSLISG---------------FRNLGKMDAAIDL 717
Query: 179 HDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHY 238
+ M+ D Y +I + N++ A D+Y E++ G P + L+N L
Sbjct: 718 YKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSK 777
Query: 239 VQMYNEKSWVIE 250
+ + S ++E
Sbjct: 778 KGQFLKASKMLE 789
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY- 68
+M + G P+ V YNT+I G C+ EL A +L+ EM+ K D + +L+ L Y
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK-GLGADVVTYNTLLTGLCYS 224
Query: 69 -----------------LDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSY 107
++P +++LI+ ++ +GN A Y EM++ + +Y
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTY 284
Query: 108 CLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLR 167
+NGL R DAK+ M CF P+ VTY+ LI +F+
Sbjct: 285 NSIINGLCMHGRLYDAKKTFDLMASKGCF--PNVVTYNTLISGFC--KFR---------- 330
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
+++E K M + D YN LI +C+ + A D++ M+ P +
Sbjct: 331 ---MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDII 387
Query: 228 SLIALINAL 236
+ L++ L
Sbjct: 388 THCILLHGL 396
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 33/246 (13%)
Query: 2 YITVSYNTVMTEM-GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHI 60
Y TV Y + E+ G+S D S+ +I FCR L A ++ +M +
Sbjct: 87 YETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKM-------------M 133
Query: 61 SLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKART 120
L + S + + SL++G+ A++ M++ GY + Y ++GL K
Sbjct: 134 KLGYEPSIV-TFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGEL 192
Query: 121 RDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHD 180
A E L M ++ VTY+ L+ L G ++AA+
Sbjct: 193 NIALELLNEM--EKKGLGADVVTYNTLLTG---------------LCYSGRWSDAARMLR 235
Query: 181 TMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL-HYV 239
M++ + PD + LI + N+D+A ++YKEM+ P+ + ++IN L +
Sbjct: 236 DMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHG 295
Query: 240 QMYNEK 245
++Y+ K
Sbjct: 296 RLYDAK 301
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 55/274 (20%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK------------------- 49
+++ + G +P+ V++ T+I+GFC+ E+ +A+DL + M+ +
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 50 -----CNWWLDKDVHISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDF 104
+ + +H + D+ +SS I+ Y+ G+ A Y ML G S +
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVV---FSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 105 DSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRM---PSYVTYDILIEN-CSNNEFKSLV 160
+Y + + GL + R +A F +Y Q + PS VTY LI+ C +S
Sbjct: 392 VTYTILIKGLCQDGRIYEA-----FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 161 ELVKD-------------------LRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEH 201
L +D L +GLM A + ML + + + V+N LI
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 202 CRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
CR D+A +++ M YG P + + ++
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 34/234 (14%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
+V Y ++ + G+SP+ V+Y +I G C+ + +A+ + ++ L + + S++
Sbjct: 376 SVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQI-------LKRGMEPSIV 427
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
YSSLI+G+ GN + + Y +M+++GY D Y + ++GLSK+ A
Sbjct: 428 T-------YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
+ + M+ Q R+ + V ++ LI+ C N F +EA K M
Sbjct: 481 MRFSVKML-GQSIRL-NVVVFNSLIDGWCRLNRF----------------DEALKVFRLM 522
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
KPD A + ++ +++A ++ M G P + LI+A
Sbjct: 523 GIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAF 576
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/216 (20%), Positives = 94/216 (43%), Gaps = 31/216 (14%)
Query: 21 VSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLINGYL 80
V +N++I G+CR+ +A + R M + + DV +++++ +
Sbjct: 497 VVFNSLIDGWCRLNRFDEALKVFRLMGI---YGIKPDVA-----------TFTTVMRVSI 542
Query: 81 AEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPS 140
EG + A + M ++G D +YC ++ K K + ++D R +
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHM-----KPTIGLQLFDLMQR--N 595
Query: 141 YVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFE 200
++ DI + N ++ L + +A+K + ++EG +PD YN +I
Sbjct: 596 KISADIAVCNV----------VIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645
Query: 201 HCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+C +D+A +++ + F P+ +L LI+ L
Sbjct: 646 YCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 95/235 (40%), Gaps = 49/235 (20%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELR---KAYDLMREMD-----AKCNWWLDKDVHISL 62
M +MGL PD ++Y T+I FC+ + + +DLM+ A CN V I L
Sbjct: 557 MFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCN------VVIHL 610
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
+ ++ S N L EG + Y M+ GY S R D
Sbjct: 611 LFKCHRIEDASKFFNN-LIEGKMEPDIVTYNTMI-CGYCS---------------LRRLD 653
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDT 181
E + ++ F P+ VT ILI C NN+ M+ A +
Sbjct: 654 EAERIFELLKVTPFG-PNTVTLTILIHVLCKNND----------------MDGAIRMFSI 696
Query: 182 MLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
M E KP+ Y L+ + ++++ ++ +++EM G +P + S +I+ L
Sbjct: 697 MAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 31/225 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G P+ V+Y V+ C+ + A +L+R+M+ ++ + + ++
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME-------ERKIKLDAVK------ 249
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YS +I+G +G+ A+ + EM G+ +D Y + G R D + L M
Sbjct: 250 -YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
I + P V + LI +C E G + EA + H M++ PD
Sbjct: 309 IKRKI--TPDVVAFSALI-DCFVKE--------------GKLREAEELHKEMIQRGISPD 351
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
Y LI C+ +DKA M M+ G P++ + LIN
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 35/228 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK-CNWWLDKDVHISLMEDLSYL 69
M + G+SPD V+Y ++I GFC+ +L KA ++ M +K C +
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCG---------------PNI 387
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
++ LINGY + +M G +D +Y + G + + AKE
Sbjct: 388 RTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQE 447
Query: 130 MIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
M+ + P V+Y IL++ C N E + +E+ + + + +
Sbjct: 448 MVSRRV--RPDIVSYKILLDGLCDNGEPEKALEIFEKIE----------------KSKME 489
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
D +YN++I C VD A+D++ + G P + + +I L
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGL 537
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M+ G+ D V+YNT+I GFC + +L A +L +EM + + V ++
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM-------VSRRVRPDIVS------ 459
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y L++G G + A + ++ + D Y + ++G+ ++ DA + LF
Sbjct: 460 -YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDA--WDLFC 516
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
P TY+I+I L +G ++EA M E + P+
Sbjct: 517 SLPLKGVKPDVKTYNIMIGG---------------LCKKGSLSEADLLFRKMEEDGHSPN 561
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
G YN+LI H + K+ + +E+ GF+ ++ +++ L
Sbjct: 562 GCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 102/248 (41%), Gaps = 42/248 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFC---RIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLS 67
+ ++G PD V+++T+I+G C R+ E + D M EM K
Sbjct: 133 IIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK-----------------P 175
Query: 68 YLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL 127
L ++L+NG G A M+ G+ + +Y + + K +T A E L
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME-L 234
Query: 128 LFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLM-------------- 172
L + ++ ++ + V Y I+I+ C + + L ++ +G
Sbjct: 235 LRKMEERKIKLDA-VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 173 -----NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
++ AK M++ PD ++ LI + + +A +++KEM+ G +P
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 228 SLIALINA 235
+ +LI+
Sbjct: 354 TYTSLIDG 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 19/184 (10%)
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
+S+LING EG A M+ +G+ + +NGL + DA L+ +
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDA-VLLIDRM 203
Query: 132 YDQCFRMPSYVTYD-ILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ F+ P+ VTY +L C + + +EL++ + R + K D
Sbjct: 204 VETGFQ-PNEVTYGPVLKVMCKSGQTALAMELLRKMEERKI----------------KLD 246
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
Y+++I C+ ++D A++++ EM GF + LI Y +++ + ++
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 251 STLR 254
++
Sbjct: 307 DMIK 310
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 115/274 (41%), Gaps = 55/274 (20%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK------------------- 49
+++ + G +P+ V++ T+I+GFC+ E+ +A+DL + M+ +
Sbjct: 275 SLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKA 334
Query: 50 -----CNWWLDKDVHISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDF 104
+ + +H + D+ +SS I+ Y+ G+ A Y ML G S +
Sbjct: 335 GMLGMGHKLFSQALHKGVKLDVVV---FSSTIDVYVKSGDLATASVVYKRMLCQGISPNV 391
Query: 105 DSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRM---PSYVTYDILIEN-CSNNEFKSLV 160
+Y + + GL + R +A F +Y Q + PS VTY LI+ C +S
Sbjct: 392 VTYTILIKGLCQDGRIYEA-----FGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 161 ELVKD-------------------LRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEH 201
L +D L +GLM A + ML + + + V+N LI
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGW 506
Query: 202 CRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
CR D+A +++ M YG P + + ++
Sbjct: 507 CRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 118/273 (43%), Gaps = 43/273 (15%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
+V Y ++ + G+SP+ V+Y +I G C+ + +A+ + ++ L + + S++
Sbjct: 376 SVVYKRMLCQ-GISPNVVTYTILIKGLCQDGRIYEAFGMYGQI-------LKRGMEPSIV 427
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
YSSLI+G+ GN + + Y +M+++GY D Y + ++GLSK+ A
Sbjct: 428 T-------YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHA 480
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAA------ 176
+ + M+ Q R+ + V ++ LI+ C N F +++ + + G+ + A
Sbjct: 481 MRFSVKML-GQSIRL-NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVM 538
Query: 177 -------------------KAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEM 217
+ D M D AV N++I +C ++ A + +
Sbjct: 539 RVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 598
Query: 218 MHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
+ P + + +I ++ +E + E
Sbjct: 599 IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFE 631
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G PD V+Y TV++G C+ ++ A +L+ +M+A + +V I
Sbjct: 214 MVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAA---RIKANVVI---------- 260
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
++++I+ + +VA + EM G + +Y +N L R DA L M
Sbjct: 261 -FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ + P+ VT++ LI+ FK G + EA K H+ M++ + PD
Sbjct: 320 LEKKI--NPNVVTFNALIDAF----FK-----------EGKLVEAEKLHEEMIQRSIDPD 362
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
YNLLI C +D+A M+K M+ P++ + LIN
Sbjct: 363 TITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 107/251 (42%), Gaps = 31/251 (12%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M +G+S D +Y+ I+ FCR +L A ++ +M + +
Sbjct: 101 LVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM-----------MKLGY 149
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
D+ L SSL+NGY A +M+ +GY D ++ ++GL + +
Sbjct: 150 EPDIVTL---SSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASE 206
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A + M+ C P VTY +V L RG ++ A + M
Sbjct: 207 AVALVDQMVQRGC--QPDLVTYG---------------TVVNGLCKRGDIDLALNLLNKM 249
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMY 242
K + ++N +I C+ +V+ A D++ EM G P++ + +LIN L +
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 243 NEKSWVIESTL 253
++ S ++ + L
Sbjct: 310 SDASRLLSNML 320
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 99/238 (41%), Gaps = 35/238 (14%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
P+ +YNT+I+GFC+ + + +L REM + L+ + Y+++I
Sbjct: 396 PNIQTYNTLINGFCKCKRVEDGVELFREMSQR-----------GLVGNTV---TYTTIIQ 441
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G+ G+ A + +M+ +D +Y + ++GL + A L+ Y Q
Sbjct: 442 GFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA---LVIFKYLQKSE 498
Query: 138 MP-SYVTYDILIEN--------------CSNNEFKSLVE---LVKDLRSRGLMNEAAKAH 179
M + Y+ +IE CS + +V ++ L S+ L+ EA
Sbjct: 499 MELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLF 558
Query: 180 DTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALH 237
M E P+ YN LI + R + + ++ KEM GF ++ + N LH
Sbjct: 559 RKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH 616
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 133/340 (39%), Gaps = 100/340 (29%)
Query: 4 TVSYNTV-------------------MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMR 44
TV+YNTV M +MG+ PD VSYNT+I GFC++ +A L+
Sbjct: 161 TVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVD 220
Query: 45 EMDAKCNWWLDKDVHISLMED---------------LSYLDP----YSSLIN-----GYL 80
E+ L+ H L+ +S DP +SS+IN G +
Sbjct: 221 EISE-----LNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKV 275
Query: 81 AEGNF-------------QVAYT-----------------FYCEMLRLGYSSDFDSYCLF 110
EG V YT Y +M+ G D Y +
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVL 335
Query: 111 MNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIE------NCSNNEF-------K 157
M+GL K R+A++ ++ D ++P+ VTY L++ + S+ EF K
Sbjct: 336 MDGLFKAGDLREAEKTFKMLLEDN--QVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEK 393
Query: 158 SLV-------ELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKA 210
S++ ++ +G++ EA M + N P+G Y +I + + A
Sbjct: 394 SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMA 453
Query: 211 YDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
++ KEM G + + L AL+N L + E +++
Sbjct: 454 IELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVK 493
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 95/225 (42%), Gaps = 31/225 (13%)
Query: 23 YNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLINGYLAE 82
YNT+I+ C++ +KA +M +M+A+ + D ++SL++GY
Sbjct: 681 YNTLIATLCKLGMTKKAAMVMGDMEAR-----------GFIPDTV---TFNSLMHGYFVG 726
Query: 83 GNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYV 142
+ + A + Y M+ G S + +Y + GLS ++ ++L M + R P
Sbjct: 727 SHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM-KSRGMR-PDDF 784
Query: 143 TYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHC 202
TY+ LI + G M + + M+ P + YN+LI E
Sbjct: 785 TYNALISGQAK---------------IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFA 829
Query: 203 RCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSW 247
+ +A ++ KEM G +P+ + +I+ L + + + W
Sbjct: 830 NVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEW 874
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/291 (20%), Positives = 109/291 (37%), Gaps = 68/291 (23%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMRE-------------MDAKCNWWLDKD 57
M G+SPD + N +I FC++ L A L+R + C L +
Sbjct: 120 MIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADE 179
Query: 58 VH--ISLMEDLSYLD---PYSSLINGYLAEGNFQVAYTF--------------------- 91
+ +S M + L Y++LI+G+ GNF A
Sbjct: 180 AYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYN 239
Query: 92 -------YCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTY 144
Y +M+ G+ D ++ +N L K + + LL ++ P++VTY
Sbjct: 240 LHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG--LLLREMEEMSVYPNHVTY 297
Query: 145 DILIENC-SNNEFKSLVELVKDLRSRGL-------------------MNEAAKAHDTMLE 184
L+++ N ++ + L + RG+ + EA K +LE
Sbjct: 298 TTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLE 357
Query: 185 GNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
N P+ Y L+ C+ ++ A + +M+ P++ + ++IN
Sbjct: 358 DNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMING 408
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 106/258 (41%), Gaps = 46/258 (17%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK-------------- 49
VS M G P+ V YNTVI+G C+ +L A ++ M+ K
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 50 ----CNWWLDKDVHISLMEDL--SYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLG 99
W D L+ D+ +DP +++LI+ ++ EGN A Y EM+R
Sbjct: 228 GLSNSGRWTDA---ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 100 YSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKS 158
+ +Y +NG DAK M+ CF P VTY+ LI C + +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF--PDVVTYNTLITGFCKSKRVED 342
Query: 159 LVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMM 218
++L ++ +GL+ D YN LI +C+ ++ A ++ M+
Sbjct: 343 GMKLFCEMTYQGLVG----------------DAFTYNTLIHGYCQAGKLNVAQKVFNRMV 386
Query: 219 HYGFAPHMFSLIALINAL 236
G +P + + L++ L
Sbjct: 387 DCGVSPDIVTYNILLDCL 404
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 37/218 (16%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M G PD V+YNT+I+GFC+ + + L EM + L+ D
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-----------TYQGLVGDAF-- 360
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y++LI+GY G VA + M+ G S D +Y + ++ L + A L
Sbjct: 361 -TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA----LV 415
Query: 130 MIYD-QCFRMP-SYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGN 186
M+ D Q M +TY+I+I+ C ++ K L + L +G+
Sbjct: 416 MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGV--------------- 460
Query: 187 YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAP 224
KPD Y +I CR +A + + M GF P
Sbjct: 461 -KPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 37/229 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY-- 68
M +G+S D S+ +I FCR C+ + M L +
Sbjct: 105 MENLGISHDLYSFTILIHCFCR-----------------CSRLSLALALLGKMMKLGFRP 147
Query: 69 -LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL 127
+ SL+NG+ FQ A + M G+ + Y +NGL K +A E +
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALE-V 206
Query: 128 LFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
+ + + R + VTY+ LI SN+ G +AA+ M++
Sbjct: 207 FYCMEKKGIRADA-VTYNTLISGLSNS---------------GRWTDAARLLRDMVKRKI 250
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
P+ + LI + N+ +A ++YKEM+ P++F+ +LIN
Sbjct: 251 DPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGF 299
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 95/226 (42%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G PD ++N++ISG C ++E++ A L+R+M + + V + +
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM-------ISEGVVANTVT------ 531
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LIN +L G + A EM+ G D +Y + GL + A+ M
Sbjct: 532 -YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ D PS ++ +ILI L G++ EA + M+ PD
Sbjct: 591 LRDG--HAPSNISCNILING---------------LCRSGMVEEAVEFQKEMVLRGSTPD 633
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+N LI CR ++ M++++ G P + L++ L
Sbjct: 634 IVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWL 679
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 101/238 (42%), Gaps = 39/238 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G P+ SY ++ GFC++ ++ +AY+++ EM A L
Sbjct: 415 MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSA------------------DGLK 456
Query: 71 P----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
P ++ LI+ + E A + EM R G D ++ ++GL + + A
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516
Query: 127 LLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGN 186
L MI + + + VTY+ LI N F LR RG + EA K + M+
Sbjct: 517 LRDMISEGV--VANTVTYNTLI-----NAF---------LR-RGEIKEARKLVNEMVFQG 559
Query: 187 YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
D YN LI CR VDKA ++++M+ G AP S LIN L M E
Sbjct: 560 SPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 106/238 (44%), Gaps = 37/238 (15%)
Query: 3 ITVSYNTVMTEM---GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVH 59
I +YN V+ EM GL P+ V +N +IS FC+ + +A ++ REM K DV+
Sbjct: 440 IDEAYN-VLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK---GCKPDVY 495
Query: 60 ISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKAR 119
++SLI+G + A +M+ G ++ +Y +N ++
Sbjct: 496 T-----------FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544
Query: 120 TRDAKEYLLFMIYDQCFRMP-SYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKA 178
++A++ + M++ P +TY+ L+K L G +++A
Sbjct: 545 IKEARKLVNEMVFQGS---PLDEITYN---------------SLIKGLCRAGEVDKARSL 586
Query: 179 HDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ ML + P N+LI CR V++A + KEM+ G P + + +LIN L
Sbjct: 587 FEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGL 644
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 122/300 (40%), Gaps = 35/300 (11%)
Query: 14 MGLSPDGVSYNTVISGFCRIEELRKAYDLMREM--------DAKCNWWLD---KDVHISL 62
MG PD ++N VI G C+ + + +A ++ M D + ++ K +
Sbjct: 281 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 63 MEDLSYLDP------YSSLINGYLAEGNFQVAYTFYCEML-RLGYSSDFDSYCLFMNGLS 115
+DL Y P +++LI+G++ G A +M+ G D +Y + G
Sbjct: 341 AKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYW 400
Query: 116 KKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEA 175
K+ A E L M C P+ +Y IL++ F L G ++EA
Sbjct: 401 KEGLVGLALEVLHDMRNKGC--KPNVYSYTILVDG-----FCKL----------GKIDEA 443
Query: 176 AKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
+ M KP+ +N LI C+ + +A ++++EM G P +++ +LI+
Sbjct: 444 YNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISG 503
Query: 236 LHYVQMYNEKSWVIESTLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEIAMDGLLLD 295
L V W++ + + ++ L ++ I +++ E+ G LD
Sbjct: 504 LCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLD 563
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 101/231 (43%), Gaps = 33/231 (14%)
Query: 10 VMTEM---GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDL 66
VM +M G SP+ VSYNT+I G+C++ K Y + DA ++ DV +L
Sbjct: 245 VMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY----KADAVLKEMVENDVSPNLTT-- 298
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
++ LI+G+ + N + + EML + SY +NGL + +A
Sbjct: 299 -----FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISM 353
Query: 127 LLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEG 185
M+ P+ +TY+ LI C N+ K +++ ++ +G +
Sbjct: 354 RDKMV--SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV------------- 398
Query: 186 NYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
P +YN+LI +C+ +D + + +EM G P + + LI L
Sbjct: 399 ---PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGL 446
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 38/217 (17%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
+S M G+ P+ ++YN +I+GFC+ + L++A D+ + + V + M
Sbjct: 350 AISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ------GAVPTTRM 403
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
Y+ LI+ Y G + EM R G D +Y + GL + A
Sbjct: 404 --------YNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 124 KEYLLFMIYDQCFR--MPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHD 180
K+ ++DQ +P VT+ IL+E C E + L+K++ GL
Sbjct: 456 KK-----LFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGL--------- 501
Query: 181 TMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEM 217
KP YN+++ +C+ N+ A +M +M
Sbjct: 502 -------KPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 34/228 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + P+ ++N VI+ C+ ++ KA D+M +M + +V
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKV---YGCSPNVV----------- 259
Query: 71 PYSSLINGYL---AEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL 127
Y++LI+GY G A EM+ S + ++ + ++G K + +
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVF 319
Query: 128 LFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
M+ DQ + P+ ++Y+ LI N G ++EA D M+
Sbjct: 320 KEML-DQDVK-PNVISYNSLINGLCNG---------------GKISEAISMRDKMVSAGV 362
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
+P+ YN LI C+ + +A DM+ + G P LI+A
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDA 410
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E GL PD V + ++SG+ ++ AYDLM +M + + +V+
Sbjct: 262 MKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKR---GFEPNVNC---------- 308
Query: 71 PYSSLINGYL-AEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y+ LI E A + EM R G +D +Y ++G K K Y +
Sbjct: 309 -YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMI--DKGYSVL 365
Query: 130 MIYDQCFRMPSYVTY-DILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
+ MPS VTY I++ + +F+ +EL++ ++ RG
Sbjct: 366 DDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC----------------H 409
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
PD +YN++I C+ V +A ++ EM G +P + + + +IN
Sbjct: 410 PDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 109/285 (38%), Gaps = 37/285 (12%)
Query: 11 MTEMGLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLS 67
M + GL PD + ++ C+ ++E K ++ MRE +L
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE---------------KFPPNLR 237
Query: 68 YLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL 127
Y ++SL+ G+ EG A +M G D + ++G + + DA + L
Sbjct: 238 Y---FTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD-L 293
Query: 128 LFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
+ + + F P+ Y +LI+ E + M+EA + M
Sbjct: 294 MNDMRKRGFE-PNVNCYTVLIQALCRTEKR--------------MDEAMRVFVEMERYGC 338
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSW 247
+ D Y LI C+ +DK Y + +M G P + + ++ A + + E
Sbjct: 339 EADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLE 398
Query: 248 VIESTLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEIAMDGL 292
+IE R D + V+ ++ K + + + E+ +GL
Sbjct: 399 LIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGL 443
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 37/227 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M+ G PD VSY TVIS C + +++ +L + +
Sbjct: 207 MSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEP-------------------VVS 247
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LING E +++ A+ EM+ G S + SY +N L + A +L M
Sbjct: 248 VYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQM 307
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEG-NYKP 189
+ C P+ T L++ C RG +A + M+ G +P
Sbjct: 308 LKRGCH--PNIYTLSSLVKGCF---------------LRGTTFDALDLWNQMIRGFGLQP 350
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ YN L+ C N+ KA ++ M G +P++ + +LIN
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 112/272 (41%), Gaps = 59/272 (21%)
Query: 4 TVSYNTV---MTEMGLSPDGVS-----------YNTVISGFCRIEELRKAYDLMREMDAK 49
VSY TV M E+GL +G YN +I+G C+ + + A++LMREM
Sbjct: 216 AVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREM--- 272
Query: 50 CNWWLDKDVHISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
++K + +++ YS+LIN G ++A++F +ML+ G + +
Sbjct: 273 ----VEKGISPNVIS-------YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFR----MPSYVTYDILIEN--------------- 150
+ G + T DA + +++Q R P+ V Y+ L++
Sbjct: 322 LVKGCFLRGTTFDALD-----LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFS 376
Query: 151 ------CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRC 204
CS N ++ L+ RG ++ A + ML P+ VY ++ CR
Sbjct: 377 HMEEIGCSPN-IRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRH 435
Query: 205 LNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+A + + M AP + + A I L
Sbjct: 436 SKFKEAESLIEIMSKENCAPSVPTFNAFIKGL 467
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 32/216 (14%)
Query: 7 YNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDL 66
+N ++ GL P+ V+YNT++ GFC + KA + M+ ++ S
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHME---------EIGCS----- 384
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
+ Y SLING+ G+ A + +ML G + Y + L + ++ ++A+
Sbjct: 385 PNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESL 444
Query: 127 LLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGN 186
+ M + C PS T++ I K L G ++ A K M + +
Sbjct: 445 IEIMSKENC--APSVPTFNAFI---------------KGLCDAGRLDWAEKVFRQMEQQH 487
Query: 187 YKPDGAV-YNLLIFEHCRCLNVDKAYDMYKEMMHYG 221
P V YN L+ + +++AY + +E+ G
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRG 523
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 115/277 (41%), Gaps = 31/277 (11%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + + PD +YN++I+GFC + L KA + M +K + + D LD
Sbjct: 281 MIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK-DCFPD-------------LD 326
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LI G+ + + EM G D +Y + GL +A++ M
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ D P +TY IL++ NN G + +A + D M + K D
Sbjct: 387 VSDGV--PPDIMTYSILLDGLCNN---------------GKLEKALEVFDYMQKSEIKLD 429
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
+Y +I C+ VD +D++ + G P++ + +I+ L ++ E +++
Sbjct: 430 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 489
Query: 251 STLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEI 287
L DS L + ++++ E++ E+
Sbjct: 490 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 526
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 103/234 (44%), Gaps = 31/234 (13%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M +G+S + +YN +I+ FCR ++ A L+ +M + L
Sbjct: 28 LVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM-------------MKL 74
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
+ S + SSL+NGY A +M+ +GY D ++ ++GL + +
Sbjct: 75 GYEPSIV-TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 133
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A + M+ C P+ VTY +++ L RG ++ A + M
Sbjct: 134 AVALVDRMVQRGC--QPNLVTYGVVVNG---------------LCKRGDIDLAFNLLNKM 176
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ D ++N +I C+ +VD A +++KEM G P++ + +LI+ L
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 230
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 36/240 (15%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
PD +YNT+I GFC+ + + +L REM H L+ D Y++LI
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMS-----------HRGLVGDTV---TYTTLIQ 368
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G +G+ A + +M+ G D +Y + ++GL + A E +M + +
Sbjct: 369 GLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE-IK 427
Query: 138 MPSYVTYDILIEN-CSNNE-------FKSLV------------ELVKDLRSRGLMNEAAK 177
+ Y+ Y +IE C + F SL ++ L S+ L+ EA
Sbjct: 428 LDIYI-YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 178 AHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALH 237
M E PD YN LI H R + + ++ +EM F ++ + N LH
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH 546
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G P+ V+Y V++G C+ ++ A++L+ +M+A ++ DV I
Sbjct: 141 MVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA---KIEADVVI---------- 187
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
++++I+ + A + EM G + +Y ++ L R DA + L M
Sbjct: 188 -FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
I + P+ VT++ LI+ VK+ G EA K HD M++ + PD
Sbjct: 247 IEKKI--NPNLVTFNALID-----------AFVKE----GKFVEAEKLHDDMIKRSIDPD 289
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
YN LI C +DKA M++ M+ P + + LI
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 118/299 (39%), Gaps = 58/299 (19%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G+ P+ SYN ++ FC ++L AY L +M L++DV + +D Y
Sbjct: 185 GVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM-------LERDV-------VPDVDSYKI 230
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
LI G+ +G A +ML G+ D SY +N L +K + R+A + L M
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 135 CFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVY 194
C P V Y+ +I + ++ R+ +A K D ML P+ Y
Sbjct: 291 C--NPDLVHYNTMI-----------LGFCREDRAM----DARKVLDDMLSNGCSPNSVSY 333
Query: 195 NLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIESTLR 254
LI C D+ +EM+ GF+PH L+ E V+E ++
Sbjct: 334 RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMK 393
Query: 255 S----------------CNLNDSELRKVLNKINVKERSIYPLLEVLAEIAMDGLLLDGG 297
+ CN ++SE K+ + VKE EI D ++D G
Sbjct: 394 NGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKE-----------EITGDTRIVDVG 441
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 112/263 (42%), Gaps = 42/263 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWL-DKDVHISLMEDLSY- 68
M GL PD +YNT+I+G+C+ ++ A ++ DA N ++ D+ + SL++ L +
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG--DAVFNGFVPDQFTYRSLIDGLCHE 369
Query: 69 -----------------LDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSY 107
+ P Y++LI G +G A EM G + ++
Sbjct: 370 GETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTF 429
Query: 108 CLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLR 167
+ +NGL K DA + MI F P T++ILI S
Sbjct: 430 NILVNGLCKMGCVSDADGLVKVMISKGYF--PDIFTFNILIHGYS--------------- 472
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
++ M A + D ML+ PD YN L+ C+ + + YK M+ G AP++F
Sbjct: 473 TQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLF 532
Query: 228 SLIALINALHYVQMYNEKSWVIE 250
+ L+ +L + +E ++E
Sbjct: 533 TFNILLESLCRYRKLDEALGLLE 555
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/301 (21%), Positives = 120/301 (39%), Gaps = 72/301 (23%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M+E GL P+ ++N +++G C++ + A L++ M +K ++ D +
Sbjct: 417 MSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPD-------------IF 462
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
++ LI+GY + + A ML G D +Y +NGL K ++ D E M
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL------------------ 171
+ C P+ T++IL+E+ C + + L+++++++ +
Sbjct: 523 VEKGC--APNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNG 580
Query: 172 -----------MNEAAKAHD------------------TMLEGNYK--------PDGAVY 194
M EA K TM E ++ PDG Y
Sbjct: 581 DLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTY 640
Query: 195 NLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIESTLR 254
L++ C+ NV+ Y EMM GF P + +L +IN L E + +I ++
Sbjct: 641 RLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQ 700
Query: 255 S 255
Sbjct: 701 K 701
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 97/248 (39%), Gaps = 40/248 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK-CNWWLDKDVHISLMEDLSYL 69
M + G++PD S+ + FC+ A L+ M ++ C +
Sbjct: 137 MRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV-------------- 182
Query: 70 DPYSSLINGYLAEGNFQV-AYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
Y +++ G+ E NF+ Y + +ML G S ++ + L KK ++ ++ L
Sbjct: 183 -AYCTVVGGFYEE-NFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 129 FMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRG----------------- 170
+I +P+ TY++ I+ C E V +V L +G
Sbjct: 241 KVIKRGV--LPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCK 298
Query: 171 --LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
EA M+ +PD YN LI +C+ V A + + + GF P F+
Sbjct: 299 NSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFT 358
Query: 229 LIALINAL 236
+LI+ L
Sbjct: 359 YRSLIDGL 366
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 109/257 (42%), Gaps = 29/257 (11%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDL---MREMDAKCNW-----WLDKDVHIS 61
++ + PD +Y +I+ +CR+ E ++AY L M+ D K + L+ D +
Sbjct: 625 ILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELD 684
Query: 62 LMEDLSYLDP------YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNG-- 113
+ ++ D Y+ +IN Y + + Y + +M R D +Y + +
Sbjct: 685 MKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKP 744
Query: 114 ---LSKKARTRDAKE---YLLFMIYDQCF---RMPSYVTYDILIENCSNNEFKSLVELVK 164
LS++ + D K Y +I QC + +D +IE+ + + L+
Sbjct: 745 ERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIA 804
Query: 165 DLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAP 224
G + EA D M+E KPD Y LI CR V KA + KEM+ G P
Sbjct: 805 CCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKP 864
Query: 225 HMFSLIALINALHYVQM 241
SL +A+HY ++
Sbjct: 865 TKASL----SAVHYAKL 877
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 99/237 (41%), Gaps = 38/237 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M ++G+ P+ Y +I +CR+ +RKA + + K ++ DL
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTK-----------KIVPDLF--- 636
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ +IN Y + AY + +M R D +Y + +N + R+ + + +
Sbjct: 637 TYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDV-- 694
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEG---- 185
+P V Y I+I C N+ K + L KD++ R ++ + + +L+
Sbjct: 695 -------IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVV-TYTVLLKNKPER 746
Query: 186 ---------NYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALI 233
+ KPD Y +LI C+ ++ +A ++ +M+ G P ALI
Sbjct: 747 NLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALI 803
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 95/252 (37%), Gaps = 56/252 (22%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
MT G++PD ++Y T+I G C + A+DLM EMD D+ I
Sbjct: 422 MTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGK---TPDIVI---------- 468
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNG----------------L 114
Y+ L G G Q A+ M G + ++ + + G L
Sbjct: 469 -YNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESL 527
Query: 115 SKKARTRDA---KEYLLFMIYDQCFR--------MPSYVTYDILIENCSNNEFKSLVELV 163
K+R DA K + D F +P V + + C+ ++
Sbjct: 528 EHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDY------- 580
Query: 164 KDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFA 223
+++A D M + +P+ ++Y LI CR NV KA + ++ ++
Sbjct: 581 --------ISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIV 632
Query: 224 PHMFSLIALINA 235
P +F+ +IN
Sbjct: 633 PDLFTYTIMINT 644
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 103/246 (41%), Gaps = 37/246 (15%)
Query: 13 EMGLSPDGVSYNTVISGF---CRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M L P+ VS+N +I GF C E K +D M EM+ V S++
Sbjct: 179 DMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME----------VQPSVVT----- 223
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y+SLI + A + +M++ + ++ L M GL K +AK+ +
Sbjct: 224 --YNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFD 281
Query: 130 MIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
M Y C P V Y IL+ DL RG ++EA M + KP
Sbjct: 282 MEYRGC--KPGLVNYGILMS---------------DLGKRGRIDEAKLLLGEMKKRRIKP 324
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVI 249
D +YN+L+ C V +AY + EM G P+ + +I+ ++ ++ V+
Sbjct: 325 DVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVL 384
Query: 250 ESTLRS 255
+ L S
Sbjct: 385 NAMLAS 390
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/279 (20%), Positives = 116/279 (41%), Gaps = 36/279 (12%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M EM + P V+YN++I CR +++ KA L+ +M + K + + +
Sbjct: 212 MLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDM-------IKKRIRPNAVT------ 258
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+ L+ G +G + A +M G +Y + M+ L K+ R +AK LL
Sbjct: 259 -FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAK--LLLG 315
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ P V Y+IL+ + C+ ++ +++ +G KP
Sbjct: 316 EMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGC----------------KP 359
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVI 249
+ A Y ++I CR + D ++ M+ P + + ++ L + +V+
Sbjct: 360 NAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVL 419
Query: 250 ES-TLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEI 287
E ++ + + +L+ + +K+ +Y E L+E+
Sbjct: 420 EVMGKKNLSFGSGAWQNLLSDLCIKDGGVY--CEALSEV 456
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 33/221 (14%)
Query: 16 LSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSL 75
L P+ V + T++ GFC+ EL A L M + +D ++++ Y+ L
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHM---VKFGVDPNLYV-----------YNCL 345
Query: 76 INGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQC 135
I+G+ GN A EM L S D +Y + +NGL + + +A M ++
Sbjct: 346 IHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERI 405
Query: 136 FRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVY 194
F PS TY+ LI C + ++L ++ + G+ +P+ +
Sbjct: 406 F--PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGV----------------EPNIITF 447
Query: 195 NLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
+ LI +C ++ A +Y EM G P + + ALI+A
Sbjct: 448 STLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDA 488
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 100/249 (40%), Gaps = 44/249 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLS 67
MT +G+ P+ Y I CR +EE K ++LM++ N +
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLY-------------- 270
Query: 68 YLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL 127
YS++I+GY GN + AY Y E+L + + ++G K A+
Sbjct: 271 ---TYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLF 327
Query: 128 LFMIYDQCFRM-PSYVTYDILIE-NCSNNEFKSLVELVKDLRSRGL-------------- 171
+ M+ F + P+ Y+ LI +C + V L+ ++ S L
Sbjct: 328 VHMVK---FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGL 384
Query: 172 -----MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHM 226
+ EA + M P A YN LI +C+ N+++A D+ EM G P++
Sbjct: 385 CIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNI 444
Query: 227 FSLIALINA 235
+ LI+
Sbjct: 445 ITFSTLIDG 453
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 18/179 (10%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
MT G+ P+ ++++T+I G+C + +++ A L EM K ++ D+
Sbjct: 435 MTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIK-----------GIVPDVV--- 480
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LI+ + E N + A Y +ML G + ++ ++G K+ R A ++ +
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF--YQ 538
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
+Q ++V + LIE C N D+RS G+ + ++ +ML+G+ +
Sbjct: 539 ENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDIC-SYVSMLKGHLQ 596
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 32/228 (14%)
Query: 16 LSPDGVSYNTVISGFCRIEELRKAYDLMREMD-AKCNWWLDKDVHISLMEDLSYLDPYSS 74
+ P Y T++ + ++ ++ KA DL EM A C+ + Y+
Sbjct: 264 MQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS---------------PTVYTYTE 308
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
LI G G AY FY +MLR G + D MN L K R + M +
Sbjct: 309 LIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWR 368
Query: 135 CFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVY 194
C P+ V+Y+ +I K+L E S+ ++E + D M + P Y
Sbjct: 369 C--TPTVVSYNTVI--------KALFE------SKAHVSEVSSWFDKMKADSVSPSEFTY 412
Query: 195 NLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMY 242
++LI +C+ V+KA + +EM GF P + +LINAL + Y
Sbjct: 413 SILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 38/260 (14%)
Query: 10 VMTEMGL---SPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDL 66
V +EMG+ +P VSYNTVI KA + ++ + W DK S+
Sbjct: 360 VFSEMGMWRCTPTVVSYNTVI----------KALFESKAHVSEVSSWFDKMKADSVSPSE 409
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
YS LI+GY + A EM G+ +YC +N L K R A E
Sbjct: 410 F---TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE- 465
Query: 127 LLFMIYDQCFRMPSYVTYDILIENCSN-NEFKSLVELVKDLRSR---------------- 169
LF + F S Y ++I++ + V+L +++++
Sbjct: 466 -LFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGM 524
Query: 170 ---GLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHM 226
G++NEA M E + D +N+++ R +A +M++ + H G P
Sbjct: 525 VKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDG 584
Query: 227 FSLIALINALHYVQMYNEKS 246
+ L+ + M+ E +
Sbjct: 585 VTYNTLLGCFAHAGMFEEAA 604
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 122/285 (42%), Gaps = 47/285 (16%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
M G +PD + +I GF + + KA +M ++ + DV
Sbjct: 114 TMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK----FGQPDVF---------- 159
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y++LING+ A M +S D +Y + + L + + A + L
Sbjct: 160 -AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 130 MIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
++ D C P+ +TY ILIE +++E G ++EA K D ML KP
Sbjct: 219 LLSDNC--QPTVITYTILIE-------ATMLE--------GGVDEALKLMDEMLSRGLKP 261
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS----LIALINALHY------- 238
D YN +I C+ VD+A++M + + G P + S L AL+N +
Sbjct: 262 DMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM 321
Query: 239 VQMYNEK---SWVIESTLRSCNLNDSELRKVLNKINV-KERSIYP 279
+M++EK + V S L + D ++ + +N + + KE+ + P
Sbjct: 322 TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTP 366
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 96/238 (40%), Gaps = 40/238 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREM-DAKCNWWL--------------D 55
M SPD V+YN +I C +L A ++ ++ C +
Sbjct: 184 MRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGG 243
Query: 56 KDVHISLMEDL--SYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
D + LM+++ L P Y+++I G EG A+ + G D SY +
Sbjct: 244 VDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNI 303
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRS 168
+ L + + + ++ + M ++C P+ VTY ILI C + + + + L+K ++
Sbjct: 304 LLRALLNQGKWEEGEKLMTKMFSEKCD--PNVVTYSILITTLCRDGKIEEAMNLLKLMKE 361
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHM 226
+GL PD Y+ LI CR +D A + + M+ G P +
Sbjct: 362 KGL----------------TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDI 403
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 106/276 (38%), Gaps = 41/276 (14%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M E GL+PD SY+ +I+ FCR L A + + M + + D+
Sbjct: 358 LMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM-----------ISDGCLPDIVN- 405
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y++++ G A + ++ +G S + SY + L A +L
Sbjct: 406 --YNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 130 MIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
M+ + P +TY+ +I C EL+ D+RS +
Sbjct: 464 MMSNGID--PDEITYNSMISCLCREGMVDEAFELLVDMRS----------------CEFH 505
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWV 248
P YN+++ C+ ++ A ++ + M+ G P+ + LI + + E +
Sbjct: 506 PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMEL 565
Query: 249 IESTLRSCNLNDSELRKVLNKINVKERSIYPLLEVL 284
+R +++ +++ +PLL VL
Sbjct: 566 ANDLVRIDAISEYSFKRL--------HRTFPLLNVL 593
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%), Gaps = 47/234 (20%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G PD V Y ++SG+ ++ AYDL+R+M + +
Sbjct: 278 MNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG------------------FE 319
Query: 71 P----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
P Y+ LI + A + EM R +D +Y ++G K +
Sbjct: 320 PNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKC--- 376
Query: 127 LLFMIYDQCFR---MPSYVTY-DILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
+++ D + MPS +TY I++ + F+ +EL++ +R
Sbjct: 377 --YIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMR--------------- 419
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ Y PD +YN++I C+ V +A ++ EM G +P + + + +IN L
Sbjct: 420 -QIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGL 472
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 36/246 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
+TE GLSP +Y +I G C++ E+ A LM EM + K V+I+ +
Sbjct: 355 LTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQS-------KGVNITQV------- 400
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+++LI+GY +G A Y M + G+ +D + + ++ R +AK++ LF
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQW-LFR 459
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL------------------ 171
+ + ++ S V+Y LI+ C + L ++ S+G+
Sbjct: 460 MMEGGVKL-STVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 172 -MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
+ EA K M PD Y LI C NVD+A ++ EM G + +
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 231 ALINAL 236
+I+ L
Sbjct: 579 VMISGL 584
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 101/236 (42%), Gaps = 34/236 (14%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G+ P+ +YNT+I+ + + + +++ M K +K + LME S
Sbjct: 254 GIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM-KKDGVVYNKVTYTLLME--------LS 304
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
+ NG +++ A + EM G SD Y ++ +K + A +LLF +
Sbjct: 305 VKNGKMSD-----AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRA--FLLFDELTE 357
Query: 135 CFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAV 193
PS TY LI+ C E + L+ +++S+G+ V
Sbjct: 358 KGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGV----------------NITQVV 401
Query: 194 YNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE-KSWV 248
+N LI +CR VD+A +Y M GF +F+ + + + ++ Y+E K W+
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWL 457
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 19/127 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M+ G+ P+ ++YN +I +C+ ++++A L M+A +D D +
Sbjct: 495 MSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN---GMDPDSY----------- 540
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+SLI+G N A + EM G + +Y + ++GLSK ++ +A F
Sbjct: 541 TYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA-----FG 595
Query: 131 IYDQCFR 137
+YD+ R
Sbjct: 596 LYDEMKR 602
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 36/246 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M++ G+ PD V+Y+ +I+GFC++ + A +++ C + + L +
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIV------CRIY-----RVGLSPNGII-- 515
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YS+LI G + A Y M+ G++ D ++ + + L K + +A+E++ M
Sbjct: 516 -YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574
Query: 131 IYDQCFRMPSYVTYDILIENCSNN--------------------EFKSLVELVKDLRSRG 170
D +P+ V++D LI N+ F + L+K L G
Sbjct: 575 TSDGI--LPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGG 632
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
+ EA K ++ D +YN L+ C+ N+ KA ++ EM+ P ++
Sbjct: 633 HLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYT 692
Query: 231 ALINAL 236
+LI+ L
Sbjct: 693 SLISGL 698
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 35/228 (15%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMRE--MDAKCNWWLDKDVHISLMEDLS 67
+M GL+P VSY ++ G C+ E +DL R M K N +
Sbjct: 398 MMEAKGLTPSEVSYGVLLDGLCKNAE----FDLARGFYMRMKRNGVCVGRI--------- 444
Query: 68 YLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL 127
Y+ +I+G G A EM + G D +Y +NG K R + AKE +
Sbjct: 445 ---TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE-I 500
Query: 128 LFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
+ IY P+ + Y LI NC G + EA + ++ M+ +
Sbjct: 501 VCRIYRVGLS-PNGIIYSTLIYNCCR---------------MGCLKEAIRIYEAMILEGH 544
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
D +N+L+ C+ V +A + + M G P+ S LIN
Sbjct: 545 TRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLING 592
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 49/259 (18%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDV--HISLMEDL-- 66
M + G +P V+YNTV+ +C+ + A +L+ M +K +D DV + L+ DL
Sbjct: 259 MEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSK---GVDADVCTYNMLIHDLCR 315
Query: 67 ----------------SYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDS 106
+ P Y++LING+ EG +A EML G S + +
Sbjct: 316 SNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVT 375
Query: 107 YCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFK-------- 157
+ ++G + ++A + +F + + PS V+Y +L++ C N EF
Sbjct: 376 FNALIDGHISEGNFKEALK--MFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMR 433
Query: 158 -----------SLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLN 206
+ ++ L G ++EA + M + PD Y+ LI C+
Sbjct: 434 MKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR 493
Query: 207 VDKAYDMYKEMMHYGFAPH 225
A ++ + G +P+
Sbjct: 494 FKTAKEIVCRIYRVGLSPN 512
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 115/267 (43%), Gaps = 43/267 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKC-------------NWWLDKD 57
M G+ D +YN +I CR + K Y L+R+M + + +
Sbjct: 294 MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGK 353
Query: 58 VHIS---LMEDLSY-LDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
V I+ L E LS+ L P +++LI+G+++EGNF+ A + M G + SY +
Sbjct: 354 VLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGV 413
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRS 168
++GL K A A+ + + M + +TY +I+ C N V L+ ++
Sbjct: 414 LLDGLCKNAEFDLARGFYMRMKRNGV--CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSK 471
Query: 169 RG----LMNEAAKAHDTMLEGNYK---------------PDGAVYNLLIFEHCRCLNVDK 209
G ++ +A + G +K P+G +Y+ LI+ CR + +
Sbjct: 472 DGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKE 531
Query: 210 AYDMYKEMMHYGFAPHMFSLIALINAL 236
A +Y+ M+ G F+ L+ +L
Sbjct: 532 AIRIYEAMILEGHTRDHFTFNVLVTSL 558
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/286 (21%), Positives = 111/286 (38%), Gaps = 54/286 (18%)
Query: 4 TVSYNTVMTEMGLS-------------------PDGVSYNTVISGFCRIEELRKAYDLMR 44
TV YNT++T M S PD +Y ++ISG CR + A +
Sbjct: 653 TVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAK 712
Query: 45 EMDAKCNWWLDKDVHISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDF 104
E +A+ N +K + Y+ ++G G ++ F +M LG++ D
Sbjct: 713 EAEARGNVLPNKVM-------------YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 105 DSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELV- 163
+ ++G S+ + + L M P+ TY+IL+ S + S L+
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQN--GGPNLTTYNILLHGYSKRKDVSTSFLLY 817
Query: 164 KDLRSRGLMNEAAKAH--------DTMLEGNYK-----------PDGAVYNLLIFEHCRC 204
+ + G++ + H MLE K D +N+LI + C
Sbjct: 818 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877
Query: 205 LNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
++ A+D+ K M G + + A+++ L+ + E V+
Sbjct: 878 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLH 923
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 39/211 (18%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G++P+ +YNT++ GF R ++R A++ EM +D I ++
Sbjct: 221 MVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMK-------KRDCEIDVVT------ 267
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+++++G+ G + A + EM+R G +Y + L KK +A +
Sbjct: 268 -YTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENA-----VV 321
Query: 131 IYDQCFRM---PSYVTYDILIENCSN-NEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGN 186
++++ R P+ TY++LI + EF EL++ + + G
Sbjct: 322 MFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGC--------------- 366
Query: 187 YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEM 217
+P+ YN++I + C V+KA ++++M
Sbjct: 367 -EPNFQTYNMMIRYYSECSEVEKALGLFEKM 396
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 95/234 (40%), Gaps = 32/234 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G D S+NT++ C+ + + KAY+L R + + + ++ ++Y
Sbjct: 152 MHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFS-----------VDTVTY-- 198
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+ ++NG+ A EM+ G + + +Y + G + + R A E+ L M
Sbjct: 199 --NVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEM 256
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
C VTY +V G + A D M+ P
Sbjct: 257 KKRDC--EIDVVTY---------------TTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
A YN +I C+ NV+ A M++EM+ G+ P++ + LI L + ++
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSR 353
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G++P+ +YN +I GFC A L+R+M ++++++ ++
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM-------IEREINPDVL------- 367
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+++LI+ + EG A EML D +Y + G K R DAK M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
P VT++ +I+ C ++L++++ RGL+
Sbjct: 428 AS------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV----------------A 465
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEK 245
+ YN LI C N++ A D+++EM+ +G P + N L Y NEK
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC----NILLYGFCENEK 517
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 24/229 (10%)
Query: 11 MTEMGLSPDGVSYNTVISGFC---RIEELRKAYDLMREMD-AKCNWWLDKDVHISLMEDL 66
+T++G PD V++NT++ G C RI E + M E + D+ V I L
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT--- 223
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
+ +++LING EG A +M+ G D +Y +NG+ K T+ A
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 127 LLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGN 186
L M ++ P V Y +I+ L KD G ++A MLE
Sbjct: 284 LSKM--EETHIKPDVVIYSAIID-----------RLCKD----GHHSDAQYLFSEMLEKG 326
Query: 187 YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
P+ YN +I C A + ++M+ P + + ALI+A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDA--------KCNWW--------- 53
++ GL + +YNT+I GFC ++ L A DL +EM + CN
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 54 LDKDVHISLMEDLSYLD----PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
L++ + + + +S +D Y+ +I+G A+ +C + G D +Y +
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENC-SNNEFKSLVELVKDLRS 168
++G K+ DA +LF P TY+ LI C E +EL+ ++RS
Sbjct: 578 MISGFCGKSAISDAN--VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 169 RGLMNEA 175
G +A
Sbjct: 636 NGFSGDA 642
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 36/227 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E+GL+P +++NT+I+G C + +A L+ +M + K +HI ++
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-------VGKGLHIDVV------- 262
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y +++NG G+ + A +M D Y ++ L K DA +YL
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA-QYLFSE 321
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSR-------------------G 170
+ ++ P+ TY+ +I+ CS + L++D+ R G
Sbjct: 322 MLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEM 217
+ EA K D ML PD YN +I+ C+ D A M+ M
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M ++ SPD V++NT+I +CR + + + L+RE IS ++
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE--------------ISRRGLVANTT 468
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LI+G+ N A + EM+ G D + + + G + + +A E LF
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE--LFE 526
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL------------------ 171
+ V Y+I+I C ++ +L L G+
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 172 -MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
+++A M + ++PD + YN LI + +DK+ ++ EM GF+ F++
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 39/265 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G P V+Y +VI G +I+ L +AY L E +K ++ +V I
Sbjct: 613 MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK---RIELNVVI---------- 659
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YSSLI+G+ G AY E+++ G + + ++ ++ L K +A M
Sbjct: 660 -YSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSM 718
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK- 188
+C P+ VTY ILI C +F ++++ +G M + ++ TM+ G K
Sbjct: 719 KELKC--TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG-MKPSTISYTTMISGLAKA 775
Query: 189 -------------------PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
PD A YN +I A+ +++E G H +
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTC 835
Query: 230 IALINALHYVQMYNEKSWVIESTLR 254
+ L++ LH E++ ++ + LR
Sbjct: 836 VVLLDTLHKNDCL-EQAAIVGAVLR 859
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 91/226 (40%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G D +YN VI GFC+ ++ KAY L+ EM K + V
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTK---GFEPTVVT---------- 624
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y S+I+G AY + E + Y ++G K R +A YL+
Sbjct: 625 -YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEA--YLILE 681
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
Q P+ T++ L++ +LV+ + +NEA +M E P+
Sbjct: 682 ELMQKGLTPNLYTWNSLLD--------ALVKAEE-------INEALVCFQSMKELKCTPN 726
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
Y +LI C+ +KA+ ++EM G P S +I+ L
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGL 772
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 100/239 (41%), Gaps = 41/239 (17%)
Query: 17 SPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLI 76
+PD +++ ++I G ++ + AY + +M LD D + + Y+SLI
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKM-------LDSDCRTNSI-------VYTSLI 489
Query: 77 NGYLAEGNFQVAYTFYCEMLRLGYSSDF---DSY--CLFMNGLSKKARTRDAKEYLLFMI 131
+ G + + Y +M+ S D ++Y C+F G +K R + I
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA------MFEEI 543
Query: 132 YDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
+ F +P +Y ILI L G NE + +M E D
Sbjct: 544 KARRF-VPDARSYSILIHG---------------LIKAGFANETYELFYSMKEQGCVLDT 587
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
YN++I C+C V+KAY + +EM GF P + + ++I+ L + +E + E
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFE 646
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 112/260 (43%), Gaps = 37/260 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E+G P + T+I GF + + A L+ EM + LD D+ +
Sbjct: 194 MQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS---LDADIVL---------- 240
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ I+ + G +A+ F+ E+ G D +Y + L K R +A E +F
Sbjct: 241 -YNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE--MFE 297
Query: 131 IYDQCFRMPSYVTYDILIENCSN----NEFKSLVE----------------LVKDLRSRG 170
++ R+P Y+ +I + +E SL+E ++ LR G
Sbjct: 298 HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMG 357
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
++EA K + M + + P+ + YN+LI CR +D A+++ M G P++ ++
Sbjct: 358 KVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVN 416
Query: 231 ALINALHYVQMYNEKSWVIE 250
+++ L Q +E + E
Sbjct: 417 IMVDRLCKSQKLDEACAMFE 436
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 35/247 (14%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
GL PD V+Y ++I C+ L +A ++ L+K+ + +Y Y++
Sbjct: 268 GLKPDEVTYTSMIGVLCKANRLDEAVEMFEH--------LEKNRRVPC----TY--AYNT 313
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
+I GY + G F AY+ G +Y + L K + +A + M D
Sbjct: 314 MIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 135 CFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSR-GLMNEAAKAHDTMLEGNYKPDGAV 193
P+ TY+ILI D+ R G ++ A + D+M + P+
Sbjct: 374 A---PNLSTYNILI----------------DMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 194 YNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIESTL 253
N+++ C+ +D+A M++EM + P + +LI+ L V ++ V E L
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Query: 254 RS-CNLN 259
S C N
Sbjct: 475 DSDCRTN 481
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 96/228 (42%), Gaps = 31/228 (13%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY 68
T M E +SPD ++NT+++G+C++ + +A + WL I D Y
Sbjct: 144 TEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVT--------WL-----IQAGCDPDY 190
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
Y+S I G+ A+ + EM + G + SY + GL + + +A L+
Sbjct: 191 FT-YTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLV 249
Query: 129 FMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
M D C P+ TY +LI+ L G +EA M E K
Sbjct: 250 KMKDDNC--CPNVRTYTVLIDA---------------LCGSGQKSEAMNLFKQMSESGIK 292
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
PD +Y +LI C +D+A + + M+ G P++ + ALI
Sbjct: 293 PDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGF 340
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 95/243 (39%), Gaps = 45/243 (18%)
Query: 7 YNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM--- 63
Y T + + G PD +Y + I+G CR +E+ A+ + +EM N +V + +
Sbjct: 177 YVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQ--NGCHRNEVSYTQLIYG 234
Query: 64 --------EDLSYL------------DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSD 103
E LS L Y+ LI+ G A + +M G D
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPD 294
Query: 104 FDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVEL 162
Y + + +A L M+ + MP+ +TY+ LI+ C N K++
Sbjct: 295 DCMYTVLIQSFCSGDTLDEASGLLEHMLENG--LMPNVITYNALIKGFCKKNVHKAM--- 349
Query: 163 VKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGF 222
GL+++ MLE N PD YN LI C N+D AY + M G
Sbjct: 350 -------GLLSK-------MLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGL 395
Query: 223 APH 225
P+
Sbjct: 396 VPN 398
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G++P+ +YN +I GFC A L+R+M ++++++ ++
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDM-------IEREINPDVL------- 367
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+++LI+ + EG A EML D +Y + G K R DAK M
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
P VT++ +I+ C ++L++++ RGL+
Sbjct: 428 AS------PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV----------------A 465
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEK 245
+ YN LI C N++ A D+++EM+ +G P + N L Y NEK
Sbjct: 466 NTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC----NILLYGFCENEK 517
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 95/229 (41%), Gaps = 24/229 (10%)
Query: 11 MTEMGLSPDGVSYNTVISGFC---RIEELRKAYDLMREMD-AKCNWWLDKDVHISLMEDL 66
+T++G PD V++NT++ G C RI E + M E + D+ V I L
Sbjct: 167 LTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLT--- 223
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
+ +++LING EG A +M+ G D +Y +NG+ K T+ A
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 127 LLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGN 186
L M ++ P V Y +I+ L KD G ++A MLE
Sbjct: 284 LSKM--EETHIKPDVVIYSAIID-----------RLCKD----GHHSDAQYLFSEMLEKG 326
Query: 187 YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
P+ YN +I C A + ++M+ P + + ALI+A
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 81/187 (43%), Gaps = 24/187 (12%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDA--------KCNWW--------- 53
++ GL + +YNT+I GFC ++ L A DL +EM + CN
Sbjct: 458 ISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEK 517
Query: 54 LDKDVHISLMEDLSYLD----PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
L++ + + + +S +D Y+ +I+G A+ +C + G D +Y +
Sbjct: 518 LEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNV 577
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENC-SNNEFKSLVELVKDLRS 168
++G K+ DA +LF P TY+ LI C E +EL+ ++RS
Sbjct: 578 MISGFCGKSAISDAN--VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Query: 169 RGLMNEA 175
G +A
Sbjct: 636 NGFSGDA 642
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 36/227 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E+GL+P +++NT+I+G C + +A L+ +M + K +HI ++
Sbjct: 217 MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKM-------VGKGLHIDVV------- 262
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y +++NG G+ + A +M D Y ++ L K DA +YL
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA-QYLFSE 321
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSR-------------------G 170
+ ++ P+ TY+ +I+ CS + L++D+ R G
Sbjct: 322 MLEKGI-APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG 380
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEM 217
+ EA K D ML PD YN +I+ C+ D A M+ M
Sbjct: 381 KLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 36/239 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M ++ SPD V++NT+I +CR + + + L+RE IS ++
Sbjct: 423 MFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLRE--------------ISRRGLVANTT 468
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LI+G+ N A + EM+ G D + + + G + + +A E LF
Sbjct: 469 TYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE--LFE 526
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL------------------ 171
+ V Y+I+I C ++ +L L G+
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 172 -MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
+++A M + ++PD + YN LI + +DK+ ++ EM GF+ F++
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 89/221 (40%), Gaps = 37/221 (16%)
Query: 7 YNTVMTEMGLSPDG----VSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
YN ++ EM P G VSY+T+I FCR RKAY L EM K +
Sbjct: 310 YNFMVKEM--EPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKG----------MV 357
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
M ++ Y+SLI +L EGN VA +M LG S D Y ++ L K
Sbjct: 358 MNVVT----YTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A Y ++ +IE+ + S L+ L G + EA K + M
Sbjct: 414 A-----------------YGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDM 456
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFA 223
PD + +I R + AY ++ +MM GF
Sbjct: 457 KGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFT 497
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 93/237 (39%), Gaps = 38/237 (16%)
Query: 21 VSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLINGYL 80
V YN +ISGFC+ + KA L M I DL Y+ L+N Y
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMS-----------KIGCEPDLV---TYNVLLNYYY 266
Query: 81 AEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR-MP 139
+ A EM+R G D SY L + R + FM+ + R
Sbjct: 267 DNNMLKRAEGVMAEMVRSGIQLDAYSYNQL---LKRHCRVSHPDKCYNFMVKEMEPRGFC 323
Query: 140 SYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLM-------------------NEAAKAH 179
V+Y LIE C + + L +++R +G++ + A K
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 180 DTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
D M E PD Y ++ C+ NVDKAY ++ +M+ + P S +LI+ L
Sbjct: 384 DQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGL 440
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 96/227 (42%), Gaps = 36/227 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G+ PDG +Y T G R+ + KA+ L EM A D H DL+
Sbjct: 470 MLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVA-------TDHHAP---DLTI-- 517
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ I+G GN A F ++ R+G D +Y + G + + + A+
Sbjct: 518 -YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN----- 571
Query: 131 IYDQCFRM---PSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
+YD+ R PS +TY +LI + G + +A + M +
Sbjct: 572 LYDEMLRKRLYPSVITYFVLIYGHAKA---------------GRLEQAFQYSTEMKKRGV 616
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
+P+ +N L++ C+ N+D+AY +M G P+ +S LI+
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 90/220 (40%), Gaps = 31/220 (14%)
Query: 17 SPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLI 76
+PD YN I G C++ L KA + R++ + L+ D Y+++I
Sbjct: 512 APDLTIYNVRIDGLCKVGNLVKAIEFQRKI-----------FRVGLVPDHV---TYTTVI 557
Query: 77 NGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCF 136
GYL G F++A Y EMLR +Y + + G +K R A +Y M
Sbjct: 558 RGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV- 616
Query: 137 RMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNL 196
P+ +T++ L+ G ++EA + M E P+ Y +
Sbjct: 617 -RPNVMTHNALLYGMCKA---------------GNIDEAYRYLCKMEEEGIPPNKYSYTM 660
Query: 197 LIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
LI ++C ++ +YKEM+ P ++ AL L
Sbjct: 661 LISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHL 700
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 88/199 (44%), Gaps = 34/199 (17%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
+ + + +GL PD V+Y TVI G+ + + A +L EM L K ++ S++
Sbjct: 534 AIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM-------LRKRLYPSVI 586
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
Y LI G+ G + A+ + EM + G + ++ + G+ K +A
Sbjct: 587 -------TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEA 639
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILI-ENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
YL M + P+ +Y +LI +NC +++ +V+L K+ M
Sbjct: 640 YRYLCKMEEEGI--PPNKYSYTMLISKNCDFEKWEEVVKLYKE----------------M 681
Query: 183 LEGNYKPDGAVYNLLIFEH 201
L+ +PDG + L F+H
Sbjct: 682 LDKEIEPDGYTHRAL-FKH 699
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 92/252 (36%), Gaps = 73/252 (28%)
Query: 21 VSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYS--SL 75
V+YN +I+GF + +EE R+ + MR PYS L
Sbjct: 274 VTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT-------------------PYSFNPL 314
Query: 76 INGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM----- 130
I GY +G F A+ EML G +Y +++ L R DA+E L M
Sbjct: 315 IEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAPDV 374
Query: 131 ---------------------IYDQCFR---MPSYVTYDILIEN-CSNNEFK-------- 157
++D PS VTY+ LI+ C + +
Sbjct: 375 VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEE 434
Query: 158 -----------SLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLN 206
+ LVK G ++ A + +D ML KPDG Y R +
Sbjct: 435 MTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGD 494
Query: 207 VDKAYDMYKEMM 218
DKA+ +++EM+
Sbjct: 495 SDKAFRLHEEMV 506
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 16 LSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSL 75
L P+ V+Y T++S C++ ++ + DL+R ++ + + D + YS+
Sbjct: 203 LVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEF-----------DCVF---YSNW 248
Query: 76 INGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQC 135
I+GY G A EM+ G + D SY + ++GLSK+ +A L MI +
Sbjct: 249 IHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGV 308
Query: 136 FRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYN 195
P+ +TY +++ L G + EA + +L + D +Y
Sbjct: 309 --EPNLITY---------------TAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYV 351
Query: 196 LLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
LI CR N+++A+ M +M G P + + +IN L
Sbjct: 352 TLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGL 392
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 96/227 (42%), Gaps = 41/227 (18%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G+ P+ ++Y +I G C++ +L +A+ L + + V I + E L
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILS---------VGIEVDEFL---- 349
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y +LI+G +GN A++ +M + G +Y +NGL R +A E +
Sbjct: 350 -YVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGV 408
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVE-------------------LVKDLRSRG 170
+ D +TY L+++ +++E L+K G
Sbjct: 409 VGD-------VITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMG 461
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEM 217
EA + M E + PD A Y +I +C+ +++A +M+ E+
Sbjct: 462 AYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL 508
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 54/124 (43%), Gaps = 14/124 (11%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M GL P+ + YN+++ G+C+ L + D MR + K + D
Sbjct: 751 MVSKGLVPNIIIYNSIVDGYCK---LGQTEDAMRVVSRKMMGRVTPDAF----------- 796
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
SS+I GY +G+ + A + + E S+DF + + G K R +A+ L M
Sbjct: 797 TVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Query: 131 IYDQ 134
+ +
Sbjct: 857 LVSE 860
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDA-KCNWWLDKDVHISLMEDLSYL 69
M E L PD +Y+T+I G+ + +++ A + R M+ KC +
Sbjct: 546 MNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCK---------------PNV 590
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKART-RDAKEYLL 128
Y+SLING+ +G+F++A + EM + +Y + L+K++ T A Y
Sbjct: 591 VTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWE 650
Query: 129 FMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
M+ ++C +P+ VT++ L++ K L E D + G + ++ M +
Sbjct: 651 LMMTNKC--VPNEVTFNCLLQGFVKKTSGKVLAE--PDGSNHGQSSLFSEFFHRMKSDGW 706
Query: 188 KPDGAVYNLLIFEHCRCLN--VDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEK 245
A YN + C C++ V A +M+ GF+P S A+++ V N K
Sbjct: 707 SDHAAAYNSALV--CLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG--NSK 762
Query: 246 SWVIESTLRSCNLNDSELRKVLNKINVKERSI 277
W + CNL + L + V E+ +
Sbjct: 763 QW---RNMDFCNLGEKGLEVAVRYSQVLEQHL 791
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 42/233 (18%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G P+ V YNT+I G+C++ ++ AY + +E+ L + L+ + +
Sbjct: 235 GCIPNIVFYNTIIGGYCKLGDIENAYLVFKEL--------------KLKGFMPTLETFGT 280
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKAR---TRDAKEYLLFMI 131
+ING+ EG+F + E+ G S N + K R D E + ++I
Sbjct: 281 MINGFCKEGDFVASDRLLSEVKERGLRV---SVWFLNNIIDAKYRHGYKVDPAESIGWII 337
Query: 132 YDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLM------------------ 172
+ C P TY+ILI C + + V + + +GL+
Sbjct: 338 ANDC--KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 173 -NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAP 224
+ A+K M E KPD Y +LI ++D A +M +++ G +P
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 31/233 (13%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ V + ++ GL P+ +SY +I +C+ +E A L+ +M +
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER-----------GC 411
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
D+ Y LI+G + G+ A +++ G S D Y + M+GL K R
Sbjct: 412 KPDIV---TYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLP 468
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
AK LLF +P Y LI+ +RS G +EA K
Sbjct: 469 AK--LLFSEMLDRNILPDAYVYATLIDGF--------------IRS-GDFDEARKVFSLS 511
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
+E K D +N +I CR +D+A M P F+ +I+
Sbjct: 512 VEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDG 564
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 31/233 (13%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
V+ + + G+SPD YN ++SG C+ A L EM LD+++ +
Sbjct: 434 AVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEM-------LDRNI----L 482
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
D +Y+ Y++LI+G++ G+F A + + G D + + G + +A
Sbjct: 483 PD-AYV--YATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEA 539
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTML 183
+ M ++ +P TY +I+ + M A K M
Sbjct: 540 LACMNRM--NEEHLVPDKFTYSTIIDGYVKQQD---------------MATAIKIFRYME 582
Query: 184 EGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ KP+ Y LI C + A + +KEM P++ + LI +L
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSL 635
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 48/268 (17%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
TV + M +M PD ++YN +I+ FC+ +L + REM
Sbjct: 316 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKG--------------- 360
Query: 64 EDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKAR 119
+ L P YS+L++ + EG Q A FY +M R+G + +Y ++ K
Sbjct: 361 ---NGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGN 417
Query: 120 TRDAKEYLLFMIYDQCFRMP---SYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEA 175
DA F + ++ ++ + VTY LI+ C K EL + + G++
Sbjct: 418 LSDA-----FRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVI--- 469
Query: 176 AKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
P+ A YN LI + N+D+A ++ E+ G P + I
Sbjct: 470 -------------PNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWG 516
Query: 236 LHYVQMYNEKSWVIESTLRSCNLNDSEL 263
L ++ E + V+ + ++ C + + L
Sbjct: 517 LCSLEKI-EAAKVVMNEMKECGIKANSL 543
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 98/237 (41%), Gaps = 39/237 (16%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVH 59
I + + M GL P+ VSY+T++ FC+ +++ K Y MR + N +
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEY------ 403
Query: 60 ISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKAR 119
Y+SLI+ GN A+ EML++G + +Y ++GL R
Sbjct: 404 -----------TYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 120 TRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKA 178
++A+E LF D +P+ +Y+ LI +EL+ +L+ RG+
Sbjct: 453 MKEAEE--LFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI------- 503
Query: 179 HDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
KPD +Y I+ C ++ A + EM G + L++A
Sbjct: 504 ---------KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 99/244 (40%), Gaps = 36/244 (14%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G+ PD + Y T I G C +E++ A +M EM K+ I + Y++
Sbjct: 502 GIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM---------KECGIKANSLI-----YTT 547
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
L++ Y GN EM L ++C+ ++GL K A +Y + D
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 135 CFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP----- 189
+ + + ++ C +N+ ++ L + + +GL+ + A+ ++++GN+K
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRT-AYTSLMDGNFKQGNVLE 666
Query: 190 ---------------DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
D Y L++ C + KA +EM+ G P I+++
Sbjct: 667 ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLK 726
Query: 235 ALHY 238
HY
Sbjct: 727 K-HY 729
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 31/222 (13%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G++P+ + N ++ C+ ++ AY ++ E I M + L Y++
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDE--------------IPSMGLVPNLVTYTT 231
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
++ GY+A G+ + A EML G+ D +Y + M+G K R +A + M ++
Sbjct: 232 ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNE 291
Query: 135 CFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVY 194
P+ VTY ++I L K+ +S EA D MLE ++ PD ++
Sbjct: 292 I--EPNEVTYGVMIR-----------ALCKEKKS----GEARNMFDEMLERSFMPDSSLC 334
Query: 195 NLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+I C VD+A ++++M+ P L LI+ L
Sbjct: 335 CKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 376
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 123/321 (38%), Gaps = 45/321 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLME------ 64
+ MGL P+ V+Y T++ G+ ++ A ++ EM + W+ D + LM+
Sbjct: 217 IPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDR-GWYPDATTYTVLMDGYCKLG 275
Query: 65 ------------DLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
+ + ++P Y +I E A + EML + D C
Sbjct: 276 RFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCC 335
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILI-------------------E 149
++ L + + +A M+ + C MP LI E
Sbjct: 336 KVIDALCEDHKVDEACGLWRKMLKNNC--MPDNALLSTLIHWLCKEGRVTEARKLFDEFE 393
Query: 150 NCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDK 209
S + L+ + +G + EA + D M E KP+ YN+LI + NV +
Sbjct: 394 KGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKE 453
Query: 210 AYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIESTLRSCNLNDSELRKVLNK 269
+ +EM+ G P+ + + L L + + ++ + + ++ L K
Sbjct: 454 GVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWELFLKK 513
Query: 270 INVK-ERSIYPLLEVLAEIAM 289
+ ++ + PL E+L EI++
Sbjct: 514 FAGELDKGVLPLKELLHEISV 534
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 38/239 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREM----------------DAKC---- 50
M ++G P V++ ++++GFC + +A L+ ++ D+ C
Sbjct: 140 MMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQ 199
Query: 51 -NWWLDKDVHISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
N LD H+ M + Y+SLI G + V+ +M+R+G S D ++
Sbjct: 200 VNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSA 259
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSR 169
++ K+ + +AK+ MI Q P+ VTY+ L+ L
Sbjct: 260 LIDVYGKEGQLLEAKKQYNEMI--QRSVNPNIVTYN---------------SLINGLCIH 302
Query: 170 GLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
GL++EA K + ++ + P+ YN LI +C+ VD + M G F+
Sbjct: 303 GLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFT 361
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 98/236 (41%), Gaps = 35/236 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + ++P+ V+YN++I+G C + L+ E N + K + +
Sbjct: 280 MIQRSVNPNIVTYNSLINGLC-------IHGLLDEAKKVLNVLVSKGFFPNAVT------ 326
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LINGY C M R G D +Y G + + A++ L M
Sbjct: 327 -YNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEF-KSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
+ C P T++IL++ C + + K+LV L +S+ ++
Sbjct: 386 V--SCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIIT------------ 431
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
YN++I C+ V+ A+ ++ + G +P + + I ++ L +++ E
Sbjct: 432 -----YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWRE 482
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 98/242 (40%), Gaps = 36/242 (14%)
Query: 14 MGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYS 73
+G+S D S+ T+I FCR L A + +M + L + S + +
Sbjct: 108 LGISHDLYSFTTLIDCFCRCARLSLALSCLGKM-------------MKLGFEPSIV-TFG 153
Query: 74 SLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYD 133
SL+NG+ F A + +++ LGY + Y ++ L +K + A + L M
Sbjct: 154 SLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM--K 211
Query: 134 QCFRMPSYVTYDILIENCSNN--------------------EFKSLVELVKDLRSRGLMN 173
+ P VTY+ LI ++ + + L+ G +
Sbjct: 212 KMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLL 271
Query: 174 EAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALI 233
EA K ++ M++ + P+ YN LI C +D+A + ++ GF P+ + LI
Sbjct: 272 EAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 234 NA 235
N
Sbjct: 332 NG 333
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 98/229 (42%), Gaps = 32/229 (13%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY 68
T M + G PD + +++ C + +A W+ K + + +L
Sbjct: 241 TGMIQRGFIPDNATCTLILTALCENGLVNRAI-----------WYFRKMIDLGFKPNLI- 288
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
++SLI+G +G+ + A+ EM+R G+ + ++ ++GL K+ T A L
Sbjct: 289 --NFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFL 346
Query: 129 FMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
++ ++ P+ TY +I C ++ L ++ +GL
Sbjct: 347 KLVRSDTYK-PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF--------------- 390
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
P+ Y LI HC+ + +AY++ M GF P++++ A I++L
Sbjct: 391 -PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 438
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 103/256 (40%), Gaps = 36/256 (14%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
P+ +Y ++I G+C+ ++L +A L M + L ++ + Y++LIN
Sbjct: 356 PNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ-----------GLFPNV---NTYTTLIN 401
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G+ G+F AY M G+ + +Y ++ L KK+R +A Y L C
Sbjct: 402 GHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA--YELLNKAFSCGL 459
Query: 138 MPSYVTYDILI-ENCSNNEFKSLVELVKDLRSRGL-------------------MNEAAK 177
VTY ILI E C N+ + + G M E+ +
Sbjct: 460 EADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESER 519
Query: 178 AHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALH 237
++ P Y +I +C+ ++D A + M +G P F+ +LI+ L
Sbjct: 520 LFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Query: 238 YVQMYNEKSWVIESTL 253
M +E + E+ +
Sbjct: 580 KKSMVDEACKLYEAMI 595
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 54/272 (19%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREM----------------DAKCNW-- 52
M E GL P+ +Y T+I+G C+ +AY+LM M D+ C
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 53 ------WLDKDVHISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDS 106
L+K L D Y+ LI + + A F+C M + G+ +D
Sbjct: 444 APEAYELLNKAFSCGLEADGV---TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRL 500
Query: 107 YCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDL 166
+ + ++ + ++++ LF + +P+ TY +I +C E
Sbjct: 501 NNILIAAFCRQKKMKESER--LFQLVVSLGLIPTKETYTSMI-SCYCKE----------- 546
Query: 167 RSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHM 226
G ++ A K M PD Y LI C+ VD+A +Y+ M+ G +P
Sbjct: 547 ---GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603
Query: 227 FSLIAL----------INALHYVQMYNEKSWV 248
+ + L NA+ ++ ++K W+
Sbjct: 604 VTRVTLAYEYCKRNDSANAMILLEPLDKKLWI 635
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 41/258 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + GLSPD ++Y ++ G C++ + L+++M +S +L+ +
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM-------------LSRGFELNSII 364
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
P S +++G G A + + +M G S D +Y + ++GL K + A L++
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA----LWL 420
Query: 131 IYDQCFR--MPSYVTYD-ILIENCSNN---EFKSLVE----------------LVKDLRS 168
+ C + +P+ T+ +L+ C E +SL++ ++
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
G + EA + ++E P A +N LI+ +C+ N+ +A + + YG AP + S
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 229 LIALINALHYVQMYNEKS 246
L++A Y N KS
Sbjct: 541 YTTLMDA--YANCGNTKS 556
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 22 SYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLINGYLA 81
+Y+TV+ G CR ++L A +R + W KD+ S++ ++S+++GY
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSE-----W--KDIGPSVVS-------FNSIMSGYCK 234
Query: 82 EGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSY 141
G +A +F+C +L+ G S+ + +NGL +A E M ++ P
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM--NKHGVEPDS 292
Query: 142 VTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEH 201
VTY+IL K G+++ A + ML+ PD Y +L+
Sbjct: 293 VTYNIL---------------AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 202 CRCLNVDKAYDMYKEMMHYGF 222
C+ N+D + K+M+ GF
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGF 358
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 114/258 (44%), Gaps = 41/258 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + GLSPD ++Y ++ G C++ + L+++M +S +L+ +
Sbjct: 318 MLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDM-------------LSRGFELNSII 364
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
P S +++G G A + + +M G S D +Y + ++GL K + A L++
Sbjct: 365 PCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA----LWL 420
Query: 131 IYDQCFR--MPSYVTYD-ILIENCSNN---EFKSLVE----------------LVKDLRS 168
+ C + +P+ T+ +L+ C E +SL++ ++
Sbjct: 421 YDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAK 480
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
G + EA + ++E P A +N LI+ +C+ N+ +A + + YG AP + S
Sbjct: 481 SGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVS 540
Query: 229 LIALINALHYVQMYNEKS 246
L++A Y N KS
Sbjct: 541 YTTLMDA--YANCGNTKS 556
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 31/201 (15%)
Query: 22 SYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLINGYLA 81
+Y+TV+ G CR ++L A +R + W KD+ S++ ++S+++GY
Sbjct: 189 TYSTVVDGLCRQQKLEDAVLFLRTSE-----W--KDIGPSVVS-------FNSIMSGYCK 234
Query: 82 EGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSY 141
G +A +F+C +L+ G S+ + +NGL +A E M ++ P
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM--NKHGVEPDS 292
Query: 142 VTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEH 201
VTY+IL K G+++ A + ML+ PD Y +L+
Sbjct: 293 VTYNIL---------------AKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQ 337
Query: 202 CRCLNVDKAYDMYKEMMHYGF 222
C+ N+D + K+M+ GF
Sbjct: 338 CQLGNIDMGLVLLKDMLSRGF 358
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 103/230 (44%), Gaps = 31/230 (13%)
Query: 7 YNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDL 66
+N + ++ + PD VSYNT+I C + L +A L+ E++ K L D+
Sbjct: 167 FNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENK-----------GLKPDI 215
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
+ + L++ YL +G F++ + +M+ + D +Y + GL+ +A++++
Sbjct: 216 VTFN--TLLLSSYL-KGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN- 271
Query: 127 LLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGN 186
LF P +++ +I N G M+EA + +++
Sbjct: 272 -LFGELKASGLKPDVFSFNAMIRGSINE---------------GKMDEAEAWYKEIVKHG 315
Query: 187 YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
Y+PD A + LL+ C+ + + A +++KE + +L L++ L
Sbjct: 316 YRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDEL 365
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 94/222 (42%), Gaps = 33/222 (14%)
Query: 13 EMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPY 72
+G+ PD ++YNT+I G+ R + +AY + R M ++ DV Y
Sbjct: 41 RLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR---EAGIEPDV-----------TTY 86
Query: 73 SSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIY 132
+SLI+G + EML G S D SY M+ K R +A + L I+
Sbjct: 87 NSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIH 146
Query: 133 DQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
+P TY+IL++ C + + +EL K L+SR KP+
Sbjct: 147 LAGL-VPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-----------------VKPEL 188
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALI 233
YN+LI C+ V M +E+ G+ P+ + ++
Sbjct: 189 MTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML 230
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 36/205 (17%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
PD ++N +I+G+CR + A DL REM +K +++ +++LI
Sbjct: 226 PDVCTFNILINGYCRSSKFDLALDLFREMK-------EKGCEPNVVS-------FNTLIR 271
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G+L+ G + EM+ LG + + ++GL ++ R DA +L ++ +
Sbjct: 272 GFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRV-- 329
Query: 138 MPSYVTYDILIEN-CSNNE-------------------FKSLVELVKDLRSRGLMNEAAK 177
+PS Y L+E C N+ F + LV+ LR G +A+
Sbjct: 330 LPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASG 389
Query: 178 AHDTMLEGNYKPDGAVYNLLIFEHC 202
+ M+ PD +NLL+ + C
Sbjct: 390 FMEKMMNAGILPDSVTFNLLLRDLC 414
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 106/259 (40%), Gaps = 42/259 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFC---RIEE-LRKAYDLM----REMDAKCNWWLDK------ 56
M E G P+ VS+NT+I GF +IEE ++ AY+++ R +A C +D
Sbjct: 254 MKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGR 313
Query: 57 -DVHISLMEDL-------SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
D L+ DL S D Y SL+ E A E+ + G + F +
Sbjct: 314 VDDACGLVLDLLNKRVLPSEFD-YGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACT 372
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+ GL K RT A ++ M+ +P VT+++L+ + CS++ L
Sbjct: 373 TLVEGLRKSGRTEKASGFMEKMMNAGI--LPDSVTFNLLLRDLCSSDHSTDANRLRLLAS 430
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
S+G Y+PD Y++L+ + + + EM+ P +F
Sbjct: 431 SKG----------------YEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIF 474
Query: 228 SLIALINALHYVQMYNEKS 246
+ L++ L ++ K
Sbjct: 475 TYNRLMDGLSCTGKFSRKQ 493
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 110/257 (42%), Gaps = 32/257 (12%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S M +G+S + +Y+ I+ FCR +L A ++ +M + +
Sbjct: 93 LVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKM-----------MKLGY 141
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
+ L+ SL+NG+ A +M+ +GY D ++ ++GL + + +
Sbjct: 142 GPSIVTLN---SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 198
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A + M+ C P VTY +I L RG + A + M
Sbjct: 199 AVALVERMVVKGC--QPDLVTYGAVING---------------LCKRGEPDLALNLLNKM 241
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMY 242
+G + D +YN +I C+ ++D A+D++ +M G P +F+ LI+ L +
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 243 NEKSWVIESTLRSCNLN 259
++ S ++ L N+N
Sbjct: 302 SDASRLLSDMLEK-NIN 317
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 95/241 (39%), Gaps = 38/241 (15%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
PD V+YNT+I GFC+ + + + ++ REM + L+ + Y++LI+
Sbjct: 354 PDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR-----------GLVGNTV---TYTTLIH 399
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G+ + A + +M+ G D +Y + ++GL A L+ Y Q
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA---LVVFEYMQKRD 456
Query: 138 MP-SYVTYDILIEN-CSNNEFKSLVELVKDLR-------------------SRGLMNEAA 176
M VTY +IE C + + +L L +GL EA
Sbjct: 457 MKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEAD 516
Query: 177 KAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
M E P+ YN LI R + + ++ KEM GFA + + N L
Sbjct: 517 ALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Query: 237 H 237
H
Sbjct: 577 H 577
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/258 (22%), Positives = 112/258 (43%), Gaps = 32/258 (12%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S+ M +G+S + +YN +I+ CR +L A ++ +M + +
Sbjct: 83 LVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKM-----------MKLGY 131
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
+ L+ SL+NG+ A +M+ +GY D ++ ++GL + + +
Sbjct: 132 GPSIVTLN---SLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASE 188
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
A + M+ C P VTY +I L RG + A + M
Sbjct: 189 AVALVERMVVKGC--QPDLVTYGAVING---------------LCKRGEPDLALNLLNKM 231
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMY 242
+G + D +Y+ +I C+ +VD A +++ EM + G P +F+ +LI+ L +
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291
Query: 243 NEKSWVIESTL-RSCNLN 259
++ S ++ L R N N
Sbjct: 292 SDASRLLSDMLERKINPN 309
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 40/251 (15%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY 68
T+M PD V+YNT+I+GFC+ +++ +L R+M + + V
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR--GLVGNTV---------- 416
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
Y++LI+G+ + A + +M+ G + +Y ++GL K + A ++
Sbjct: 417 --TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA---MV 471
Query: 129 FMIYDQCFRM-PSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGN 186
Y Q +M P TY+I+ E C + + +L L +G+ + A++TM+ G
Sbjct: 472 VFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI-AYNTMISGF 530
Query: 187 YK--------------------PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHM 226
K PD YN LI H R + + ++ KEM FA
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDA 590
Query: 227 FSLIALINALH 237
+ + + LH
Sbjct: 591 STYGLVTDMLH 601
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G PD V+Y VI+G C+ E A +L+ +M+ ++ DV I
Sbjct: 196 MVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME---KGKIEADVVI---------- 242
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YS++I+ + A + EM G D +Y ++ L R DA L M
Sbjct: 243 -YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ + P+ VT++ LI+ G + EA K D M++ + P+
Sbjct: 302 LERKI--NPNVVTFNSLIDA---------------FAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
YN LI C +D+A ++ M+ P + + LIN
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGF 390
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 99/250 (39%), Gaps = 44/250 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E ++P+ V++N++I F + +L +A L EM + +D
Sbjct: 301 MLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRS------------------ID 342
Query: 71 P----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
P Y+SLING+ A + M+ D +Y +NG K + D E
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGME- 401
Query: 127 LLFMIYDQCFRMPSYVTYDILIE------NCSNNE--FKSLVE------------LVKDL 166
LF + + + VTY LI +C N + FK +V L+ L
Sbjct: 402 -LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGL 460
Query: 167 RSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHM 226
G + +A + + + +PD YN++ C+ V+ +D++ + G P +
Sbjct: 461 CKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDV 520
Query: 227 FSLIALINAL 236
+ +I+
Sbjct: 521 IAYNTMISGF 530
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 89/222 (40%), Gaps = 37/222 (16%)
Query: 7 YNTVMTEMGLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
+ ++++ G+SPD V++N +I+GFCR +E +K D M++ N +
Sbjct: 255 FEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVY---------- 304
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
YS+L+NG+ G Q A + E+ + G D Y MN + T +A
Sbjct: 305 -------NYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEA 357
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTML 183
+ L M +C +TY++++ + L S G EA + D
Sbjct: 358 MKLLGEMKASRC--RADTLTYNVIL---------------RGLSSEGRSEEALQMLDQWG 400
Query: 184 EGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPH 225
+ Y +++ C ++KA M G PH
Sbjct: 401 SEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPH 442
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G+S D VS ++VI GFC++ + +A L+ + N ++ YSS
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV-----------------YSS 378
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
++ + G+ A T + E+ LG D Y ++G RT A +Y ++ +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL--K 436
Query: 135 CFRMPSYVTYDILIENCSNNEFKSLVELV-KDLRSRG----------LMNEAAKAH---- 179
PS T ILI CS S E V +++++ G LM+ K H
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 180 -----DTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
D M PD A YN+LI +D+A ++ E++ GF P + +I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 235 AL 236
Sbjct: 557 GF 558
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M GL D V+YN ++ G+ + +L K ++L+ EM + + DV
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA---GISPDV-----------A 514
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ LI+ + G A E++R G+ ++ + G SK+ D +E +
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILW 571
Query: 131 IYDQCFRM-PSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
Y RM P VT L+ C M +A + +L+ K
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQR----------------MEKAIVLFNKLLDAGLK 615
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKS 246
PD +YN LI +C +++KA ++ M+ G P+ + AL+ L + N ++
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSET 673
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 39/242 (16%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G+S D VS ++VI GFC++ + +A L+ + N ++ YSS
Sbjct: 336 GISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFV-----------------YSS 378
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
++ + G+ A T + E+ LG D Y ++G RT A +Y ++ +
Sbjct: 379 FLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL--K 436
Query: 135 CFRMPSYVTYDILIENCSNNEFKSLVELV-KDLRSRG----------LMNEAAKAH---- 179
PS T ILI CS S E V +++++ G LM+ K H
Sbjct: 437 SGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNK 496
Query: 180 -----DTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
D M PD A YN+LI +D+A ++ E++ GF P + +I
Sbjct: 497 VFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIG 556
Query: 235 AL 236
Sbjct: 557 GF 558
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 98/238 (41%), Gaps = 35/238 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M GL D V+YN ++ G+ + +L K ++L+ EM + + DV
Sbjct: 469 MKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSA---GISPDV-----------A 514
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ LI+ + G A E++R G+ ++ + G SK+ D +E +
Sbjct: 515 TYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG---DFQEAFILW 571
Query: 131 IYDQCFRM-PSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
Y RM P VT L+ C M +A + +L+ K
Sbjct: 572 FYMADLRMKPDVVTCSALLHGYCKAQR----------------MEKAIVLFNKLLDAGLK 615
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKS 246
PD +YN LI +C +++KA ++ M+ G P+ + AL+ L + N ++
Sbjct: 616 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSET 673
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 88/219 (40%), Gaps = 38/219 (17%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
VM + L P+ V++N ++S C+ + +RKA ++ M D+ S
Sbjct: 193 VMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-------DRFTPDS-------- 237
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
YS L+ G+ E N A + EM+ G D +Y + ++ L K R +A +
Sbjct: 238 KTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRS 297
Query: 130 MIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLE---GN 186
M C P+ Y +L+ + G N +A DT LE
Sbjct: 298 MDPSIC--KPTTFIYSVLVH------------------TYGTENRLEEAVDTFLEMERSG 337
Query: 187 YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPH 225
K D AV+N LI C+ + Y + KEM G P+
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPN 376
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 110/263 (41%), Gaps = 46/263 (17%)
Query: 15 GLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDP 71
G PD V+YN+++ F R E++++ Y M++M KD
Sbjct: 362 GFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMG------FGKDEMT----------- 404
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRL-GYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+++I+ Y +G +A Y +M L G + D +Y + ++ L K RT +A + M
Sbjct: 405 YNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM 464
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ D + P+ TY LI C + G EA ML KPD
Sbjct: 465 L-DVGIK-PTLQTYSALI--CGYAK-------------AGKREEAEDTFSCMLRSGTKPD 507
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
Y++++ R KA+ +Y++M+ G P +I L M +S I+
Sbjct: 508 NLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGL----MKENRSDDIQ 563
Query: 251 STLRS----CNLNDSELRKVLNK 269
T+R C +N E+ VL K
Sbjct: 564 KTIRDMEELCGMNPLEISSVLVK 586
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 32/247 (12%)
Query: 7 YNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDL 66
+NT+M + G SP S N ++ C L + Y ++ E+ D IS L
Sbjct: 810 FNTMMRD-GPSPTVESINILLHALCVDGRLEELYVVVEELQ-------DMGFKISKSSIL 861
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
LD ++ GN Y M GY Y + + L K R RDA E
Sbjct: 862 LMLDAFAR-------AGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA-EI 913
Query: 127 LLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGN 186
++ + + F++ + +L + ++K V++ + ++ GL
Sbjct: 914 MVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGL--------------- 958
Query: 187 YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKS 246
+PD YN LI +CR ++ Y + ++M + G P + + +LI+A + +
Sbjct: 959 -EPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAE 1017
Query: 247 WVIESTL 253
+ E L
Sbjct: 1018 QLFEELL 1024
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 36/223 (16%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREM--DAKCNWWLDKDVHIS 61
+S M G++P+ V+YN+ I GF R +R+A L RE+ D N H++
Sbjct: 257 ALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTAN-------HVT 309
Query: 62 LMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTR 121
Y++LI+GY + A M G+S +Y + L + R R
Sbjct: 310 ----------YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIR 359
Query: 122 DAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDT 181
+A L M + P +T + LI N + + ++V A K
Sbjct: 360 EANRLLTEMSGKKI--EPDNITCNTLI-----NAYCKIEDMV----------SAVKVKKK 402
Query: 182 MLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAP 224
M+E K D Y LI C+ L ++ A + M+ GF+P
Sbjct: 403 MIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSP 445
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 89/219 (40%), Gaps = 41/219 (18%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
VM G SP V+YN+++ C +R+A L+ EM K +
Sbjct: 332 VMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGK------------------KI 373
Query: 70 DP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKE 125
+P ++LIN Y + A +M+ G D SY ++G K +AKE
Sbjct: 374 EPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKE 433
Query: 126 YLLFMIYDQCFRMPSYVTYDILIENCSN-NEFKSLVELVKDLRSRGLMNEAAKAHDTMLE 184
L MI ++ F P Y TY L++ N N+ + +L+++ RGL
Sbjct: 434 ELFSMI-EKGFS-PGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLC------------ 479
Query: 185 GNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFA 223
D A+Y LI C+ VD A +++ M G
Sbjct: 480 ----ADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLV 514
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 102/246 (41%), Gaps = 37/246 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M ++G+ + YN ++ + + KA L+ EM+ K + D+
Sbjct: 194 MVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK-----------GVFPDIF--- 239
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LI+ Y + A + M R G + + +Y F++G S++ R R+A L
Sbjct: 240 TYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATR-LFRE 298
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL------------------ 171
I D ++VTY LI+ C N+ + L + + SRG
Sbjct: 299 IKDDV--TANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDG 356
Query: 172 -MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
+ EA + M +PD N LI +C+ ++ A + K+M+ G M+S
Sbjct: 357 RIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYK 416
Query: 231 ALINAL 236
ALI+
Sbjct: 417 ALIHGF 422
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 33/189 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
+ + G +PD V Y T+I GFC L A L EM K M +
Sbjct: 309 LKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG------------MRPNEF-- 354
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ +I+G+ G + FY EMLR GY S + G ++ +A E +F
Sbjct: 355 AYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFE--IFK 412
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ P+ +TY+ LI+ C N+ + ++L K+L++ GL KP
Sbjct: 413 NMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGL----------------KP 456
Query: 190 DGAVYNLLI 198
G Y L+
Sbjct: 457 SGMAYAALV 465
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 91/244 (37%), Gaps = 36/244 (14%)
Query: 13 EMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPY 72
+ GL P Y +ISGFC I +++ M A W ++I Y
Sbjct: 241 KQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIA---WNHFPSMYI-----------Y 286
Query: 73 SSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIY 132
+I G AY + + GY+ D Y + G +K A++ L F +
Sbjct: 287 QKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARK-LWFEMI 345
Query: 133 DQCFRMPSYVTYDILIENCSNNEFKSLVE--------------------LVKDLRSRGLM 172
+ R P+ Y+++I SLVE ++K S G
Sbjct: 346 KKGMR-PNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 173 NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIAL 232
+EA + M E P+ YN LI C+ V+K +YKE+ G P + AL
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 233 INAL 236
+ L
Sbjct: 465 VRNL 468
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 120/298 (40%), Gaps = 56/298 (18%)
Query: 11 MTEMGLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLS 67
M GL D +Y ++ FC+ IE+ RK ++ MRE+ N
Sbjct: 509 MKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPN---------------- 552
Query: 68 YLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY- 126
+ Y++LI+ YL A + ML G + +Y ++G K + A +
Sbjct: 553 -VVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIF 611
Query: 127 -------------LLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLM 172
+ F YD P+ VTY L++ C ++ +
Sbjct: 612 ERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHR----------------V 655
Query: 173 NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIAL 232
EA K D M +P+ VY+ LI C+ +D+A ++ EM +GF +++ +L
Sbjct: 656 EEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSL 715
Query: 233 INALHYVQMYNEKSWVIESTLR-SCNLND---SELRKVLNKINVKERSIYPLLEVLAE 286
I+ V+ + S V+ L SC N +E+ L K+ K Y L++++ E
Sbjct: 716 IDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG-KTDEAYKLMQMMEE 772
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G SPD V+Y+T+I + ++ +L A ++MREM K K I+L ++
Sbjct: 411 GFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG----IKMNTITL----------NT 456
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
+++ E A+ + G+ D +Y + G ++ + A E ++D+
Sbjct: 457 ILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE-----MWDE 511
Query: 135 CFRM---PSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
++ P+ T++ LI C + + + +E +L GL+ PD
Sbjct: 512 MKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL----------------PD 555
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ +N +I +C+ V+KA++ Y E + + F P ++ L+N L
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGL 601
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 94/225 (41%), Gaps = 38/225 (16%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G D V+Y T+I GF R E++ KA ++ EM K V I+ + ++S
Sbjct: 481 GFIVDEVTYGTLIMGFFREEKVEKALEMWDEM---------KKVKIT-----PTVSTFNS 526
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
LI G G ++A + E+ G D ++ + G K+ R A E+ Y++
Sbjct: 527 LIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEF-----YNE 581
Query: 135 CFR---MPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
+ P T +IL+ L G+ +A +T++E + D
Sbjct: 582 SIKHSFKPDNYTCNILLNG---------------LCKEGMTEKALNFFNTLIE-EREVDT 625
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
YN +I C+ + +AYD+ EM G P F+ + I+ L
Sbjct: 626 VTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLL 670
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 55/257 (21%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+++E ++PD V+YNT++ + L +L+ +D K N + V
Sbjct: 230 MVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL--LDMKKNGLVPNRV----------- 276
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y++L+ GY G+ + A+ M + D +Y + +NGL R+ E +
Sbjct: 277 -TYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDA 335
Query: 130 MIYDQCFRM-PSYVTYDILIENCSNNEFKSLVELVKDLRSRGLM----NEAAKA----HD 180
M + ++ P VTY+ LI+ C EL L +R LM N+ KA H+
Sbjct: 336 M---KSLKLQPDVVTYNTLIDGC--------FELGLSLEARKLMEQMENDGVKANQVTHN 384
Query: 181 TMLE---------------------GNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMH 219
L+ + PD Y+ LI + + ++ A +M +EM
Sbjct: 385 ISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQ 444
Query: 220 YGFAPHMFSLIALINAL 236
G + +L +++AL
Sbjct: 445 KGIKMNTITLNTILDAL 461
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 32/244 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + + P GV++ T+I G C+ +++A + +M + + VHI
Sbjct: 178 MVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLK--VYGVRPTVHI---------- 225
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+SLI G A+ E D Y ++ L K R+ + L M
Sbjct: 226 -YASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEM 284
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
C P VTY++LI C N+ +S A + D M+E KP
Sbjct: 285 SEKGC--KPDTVTYNVLINGFCVENDSES----------------ANRVLDEMVEKGLKP 326
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVI 249
D YN+++ R ++A ++++M G +P S + + L + E + ++
Sbjct: 327 DVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVIL 386
Query: 250 ESTL 253
+ L
Sbjct: 387 DEML 390
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 93/236 (39%), Gaps = 33/236 (13%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
M + G+ PD +Y+ ++ F ++ L K DL+ EM + + L +
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGS--------------LPDI 317
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y+ L+ Y G+ + A + +M G + + ++Y + +N + R D ++ LF
Sbjct: 318 TSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ--LF 375
Query: 130 MIYDQCFRMPSYVTYDILIENCSNNE-FKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
+ P TY+ILIE FK +V L D M+E N +
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD----------------MVEENIE 419
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
PD Y +IF + + A + + M P + +I A +Y E
Sbjct: 420 PDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE 475
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 104/255 (40%), Gaps = 36/255 (14%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
VM G PD ++YN +I C+ +R A L+ +M SL +
Sbjct: 164 VMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM--------------SLSGSPPDV 209
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y+++I GN + A F+ + L+ G +Y + + + + + A E L
Sbjct: 210 ITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLED 269
Query: 130 MIYDQCFRMPSYVTYDILIE-NCSNNEFKSLVELVKDLRSRGL----------------- 171
M + C+ P VTY+ L+ NC + + +++ + S GL
Sbjct: 270 MAVEGCY--PDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSH 327
Query: 172 --MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
+E + + M + +Y P YN+LI C+ + +A D + +M+ P + +
Sbjct: 328 EYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTY 387
Query: 230 IALINALHYVQMYNE 244
++ A+ M ++
Sbjct: 388 NTVLGAMSKEGMVDD 402
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 99/232 (42%), Gaps = 38/232 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMRE----------------MDAKCN--W 52
M G PD V+YN++++ CR L + +++ + + C+ +
Sbjct: 270 MAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEY 329
Query: 53 WLDKDVHISLMEDLSY---LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
W + + +++M SY + Y+ LING A F+ +ML D +Y
Sbjct: 330 WDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNT 389
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSR 169
+ +SK+ DA E LL ++ + C P +TY+ +I+ L +
Sbjct: 390 VLGAMSKEGMVDDAIE-LLGLLKNTCCP-PGLITYNSVIDG---------------LAKK 432
Query: 170 GLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYG 221
GLM +A + + ML+ PD LI+ CR V++A + KE + G
Sbjct: 433 GLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRG 484
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 12 TEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDP 71
++ G+ D VS+N I FC + L AY MREM+ L DV
Sbjct: 169 SKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSG---LTPDVVT----------- 214
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
Y++LI+ + + M+ G + ++ + + L + R DA + LL M
Sbjct: 215 YTTLISALYKHERCVIGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMP 274
Query: 132 YDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
Q P +TY+++I+ F + E + + M YKP+
Sbjct: 275 KLQV--EPDSITYNMVIKGFFLARFPDMAE---------------RVYTAMHGKGYKPNL 317
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+Y +I C+ N D AY M K+ M + P++ ++ L+ L
Sbjct: 318 KIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGL 362
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 99/249 (39%), Gaps = 36/249 (14%)
Query: 9 TVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY 68
T+M G+ P+ + NT I F R L KA + M + ++ ++
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQV-----------VGIVPNVVT 314
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
Y+ +I GY + A +M G D SY M L K+ R + ++ +
Sbjct: 315 ---YNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMK 371
Query: 129 FMIYDQCFRMPSYVTYDILIENCSNNE--------FKSLVE------------LVKDLRS 168
M + +P VTY+ LI + ++ K E +V L
Sbjct: 372 KMAKEHGL-VPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCK 430
Query: 169 RGLMNEAAKAHDTML-EGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
G M+EA + ML +G+ PD Y ++ CR VDKA + + M +G P+
Sbjct: 431 EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTV 490
Query: 228 SLIALINAL 236
S AL+N +
Sbjct: 491 SYTALLNGM 499
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/224 (20%), Positives = 94/224 (41%), Gaps = 30/224 (13%)
Query: 13 EMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPY 72
E G D + Y+ ++ C+ + +A DL+ EM +K + D + Y
Sbjct: 411 EKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPD-------------VVTY 457
Query: 73 SSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIY 132
++++NG+ G A M G+ + SY +NG+ + ++ +A+E + +
Sbjct: 458 TAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEARE--MMNMS 515
Query: 133 DQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGA 192
++ + P+ +TY +++ LR G ++EA M+ + P
Sbjct: 516 EEHWWSPNSITYSVIMHG---------------LRREGKLSEACDVVREMVLKGFFPGPV 560
Query: 193 VYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
NLL+ CR +A +E ++ G A ++ + +I+
Sbjct: 561 EINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGF 604
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 108/273 (39%), Gaps = 38/273 (13%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
VM G P+ VSY +++G CR + +A ++M + +WW +
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEE--HWWSPNSI----------- 525
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
YS +++G EG A EM+ G+ L + L + RT +A++++
Sbjct: 526 -TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEE 584
Query: 130 MIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKD-------------------LRSR 169
+ C + V + +I C N+E + + ++ D L +
Sbjct: 585 CLNKGC--AINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKK 642
Query: 170 GLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
G + EA + ML P Y +I +C+ VD + ++M+ +++
Sbjct: 643 GRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQ 702
Query: 230 IALINALHYVQMYNEKSWVIESTLRSCNLNDSE 262
+ I L + E ++ LR+ + +D++
Sbjct: 703 V--IEKLCVLGKLEEADTLLGKVLRTASRSDAK 733
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 110/245 (44%), Gaps = 45/245 (18%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMD------------------AKCNWWLDK 56
G+SP +YN +I G+ R E K +D+++EM+ K + L+
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 57 DVHISLMEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMN 112
+ MED + P Y+ LI+G ++G + A+ F EML+ G + +Y ++
Sbjct: 514 QIVKRDMEDRG-VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 113 GLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCS-NNEFKSLVELVKDLRSRGL 171
GLS + +A E LL I + + P TY+ LI + + L ++++ G+
Sbjct: 573 GLSMTGKLSEA-EDLLLEISRKGLK-PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGI 630
Query: 172 --------------MNEAAKAHDTML-EGNYKPDGAVYNLLIFEHCRCLNVD--KAYDMY 214
E + + + E + KPD VYN ++ HC ++ D KA+++
Sbjct: 631 KPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVL--HCYAVHGDMEKAFNLQ 688
Query: 215 KEMMH 219
K+M+
Sbjct: 689 KQMIE 693
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 43/262 (16%)
Query: 16 LSPDGVSYNTVISGFCRIEELRKAYDLMREMDA------------------KCNWWLDKD 57
L P ++YNT+I G+C+ K++ + M A K D +
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304
Query: 58 VHISLMEDLSYLD---PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGL 114
+ M+DL ++ +S L +GY + + A Y + G + + + +N L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364
Query: 115 SKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL-- 171
K+ + A+E L + +P+ V Y+ +I+ C + ++ + +G+
Sbjct: 365 CKEGKIEKAEEILGREMAKGL--VPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKP 422
Query: 172 -----------------MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMY 214
M A K + M P YN+LI + R DK +D+
Sbjct: 423 DHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDIL 482
Query: 215 KEMMHYGFAPHMFSLIALINAL 236
KEM G P++ S LIN L
Sbjct: 483 KEMEDNGTMPNVVSYGTLINCL 504
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 104/246 (42%), Gaps = 38/246 (15%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLS-Y 68
M + G+ PD ++YN +I FC + E+ A +K+V+ ++ +S
Sbjct: 414 AMEKQGMKPDHLAYNCLIRRFCELGEMENA---------------EKEVNKMKLKGVSPS 458
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
++ Y+ LI GY + F + EM G + SY +N L K ++ +A+ ++
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQ--IV 516
Query: 129 FMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGL---------------- 171
+ P Y++LI+ CS + + K++ +G+
Sbjct: 517 KRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSM 576
Query: 172 MNEAAKAHDTMLE---GNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
+ ++A D +LE KPD YN LI + NV + +Y+EM G P + +
Sbjct: 577 TGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKT 636
Query: 229 LIALIN 234
LI+
Sbjct: 637 YHLLIS 642
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 39/256 (15%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCR---IEELRKAYDLMREMDAKCNWWLDKDVHISLMEDL 66
+M+E G+S + V+Y ++I G+C+ +EE ++L++E L D H+
Sbjct: 286 LMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK------LVADQHM------ 333
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
Y L++GY G + A + M+ +G ++ +NG K + +A++
Sbjct: 334 -----YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQ- 387
Query: 127 LLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEG 185
+F + P + TY+ L++ C G ++EA K D M +
Sbjct: 388 -IFSRMNDWSLKPDHHTYNTLVDGYC----------------RAGYVDEALKLCDQMCQK 430
Query: 186 NYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEK 245
P YN+L+ + R ++K M+ G S L+ AL + +NE
Sbjct: 431 EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEA 490
Query: 246 SWVIESTLRSCNLNDS 261
+ E+ L L D+
Sbjct: 491 MKLWENVLARGLLTDT 506
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 94/238 (39%), Gaps = 35/238 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M +SPD + + V++ +CR + KA +E ++ L+ +
Sbjct: 216 MISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN-------------VV 262
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+SLINGY G+ + M G S + +Y + G KK +A E++ +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA-EHVFEL 321
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVE-------------------LVKDLRSRG 170
+ ++ ++ Y +L++ C + + V L+ G
Sbjct: 322 LKEKKLVADQHM-YGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSG 380
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
+ EA + M + + KPD YN L+ +CR VD+A + +M P + +
Sbjct: 381 QLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 35/245 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
+ E S D V+YNT++ GFCR +++++ +L R M+ K V+I
Sbjct: 316 LDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHK------NSVNIV--------- 360
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+ LI G L G A + M GY++D +Y +F++GL A ++
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALG-VMQE 419
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGL------------------- 171
+ + Y I+ C + LVK++ G+
Sbjct: 420 VESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSR 479
Query: 172 MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIA 231
+ EA+ M + +P YN+LI C+ +A KEM+ G+ P + +
Sbjct: 480 LGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSI 539
Query: 232 LINAL 236
L+ L
Sbjct: 540 LLCGL 544
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G P VSYN +I G C+ + +A ++EM + W D L
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEM-LENGWKPD-------------LK 535
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YS L+ G + +A + + L+ G +D + + ++GL + DA + M
Sbjct: 536 TYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANM 595
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ C + VTY+ L+E FK G N A M + +PD
Sbjct: 596 EHRNC--TANLVTYNTLMEGF----FKV-----------GDSNRATVIWGYMYKMGLQPD 638
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
YN ++ C C V A + + + ++G P +++ L+ A+
Sbjct: 639 IISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 103/253 (40%), Gaps = 36/253 (14%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M G + D +Y I G C + KA +M+E+++ +L
Sbjct: 384 LMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG----------------GHL 427
Query: 70 D--PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL 127
D Y+S+I+ + + A EM + G + + GL + +R +A +L
Sbjct: 428 DVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFL 487
Query: 128 LFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNY 187
M + C P+ V+Y+ILI C L G EA+ MLE +
Sbjct: 488 REMGKNGC--RPTVVSYNILI--CG-------------LCKAGKFGEASAFVKEMLENGW 530
Query: 188 KPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSW 247
KPD Y++L+ CR +D A +++ + + G + LI+ L V ++
Sbjct: 531 KPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMT 590
Query: 248 VIES-TLRSCNLN 259
V+ + R+C N
Sbjct: 591 VMANMEHRNCTAN 603
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 44/250 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY-- 68
M+E G++PD YN +I GF + ++ + A +L + + + + H ++ LS
Sbjct: 210 MSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCG 269
Query: 69 --------------------LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
L YSSLI+G GN A + + E+ S D +Y
Sbjct: 270 RVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYN 329
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRS 168
+ G + + +++ E M + + V+Y+ILI K L
Sbjct: 330 TMLGGFCRCGKIKESLELWRIMEHKNSVNI---VSYNILI---------------KGLLE 371
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLN--VDKAYDMYKEMMHYGFAPHM 226
G ++EA M Y D Y IF H C+N V+KA + +E+ G +
Sbjct: 372 NGKIDEATMIWRLMPAKGYAADKTTYG--IFIHGLCVNGYVNKALGVMQEVESSGGHLDV 429
Query: 227 FSLIALINAL 236
++ ++I+ L
Sbjct: 430 YAYASIIDCL 439
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 90/210 (42%), Gaps = 32/210 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G PD SY+TVI+ + +L A +L EM + + D++
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSER-----------GVAPDVTC-- 221
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLR-LGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y+ LI+G+L E + + A + +L + ++ + ++GLSK R
Sbjct: 222 -YNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV--------- 271
Query: 130 MIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
D C ++ ++ + +N + + L+ L G +++A + + E
Sbjct: 272 ---DDCLKI-----WERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMH 219
D YN ++ CRC + ++ ++++ M H
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEH 353
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 95/218 (43%), Gaps = 31/218 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G+SP+ V+Y+++I+G C+ L A + EMD+K ++ +V
Sbjct: 74 MKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK---KINPNVI----------- 119
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+S+LI+ Y G + Y M+++ + +Y + GL R +A + L M
Sbjct: 120 TFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLM 179
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
I C P+ VTY L +N FKS SR +++ K D M + +
Sbjct: 180 ISKGC--TPNVVTYSTL----ANGFFKS---------SR--VDDGIKLLDDMPQRGVAAN 222
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
N LI + + +D A ++ M G P++ S
Sbjct: 223 TVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRS 260
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 92/226 (40%), Gaps = 31/226 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M ++G+ PD V+ +++++GFC ++ A + +M+ + +DV + +
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQME---KMGIKRDVVVDTI------- 53
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
LI+ A M G S + +Y + GL K R DA+ L M
Sbjct: 54 ----LIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM 109
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
D P+ +T+ LI+ + RG +++ + M++ + P+
Sbjct: 110 --DSKKINPNVITFSALIDAYAK---------------RGKLSKVDSVYKMMIQMSIDPN 152
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
Y+ LI+ C VD+A M M+ G P++ + L N
Sbjct: 153 VFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 96/235 (40%), Gaps = 34/235 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M +G++ D VSYNT++S + ++ +A D++REM + + KDV
Sbjct: 435 MRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREM---ASVGIKKDVVT---------- 481
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++L+ GY +G + + EM R + +Y ++G SK ++A E +F
Sbjct: 482 -YNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAME--IFR 538
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ V Y LI+ C N S V L+ ++ G+ P
Sbjct: 539 EFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI----------------SP 582
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
+ YN +I R +D++ D Y F+ S + +Q++ +
Sbjct: 583 NVVTYNSIIDAFGRSATMDRSAD-YSNGGSLPFSSSALSALTETEGNRVIQLFGQ 636
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 107/249 (42%), Gaps = 39/249 (15%)
Query: 16 LSPDGVSYNTVISGF---CRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPY 72
+PD Y T++ G+ R+ + + + MR D D++ H ++++Y
Sbjct: 410 FAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQD-------DRNSH---PDEVTYTTVV 459
Query: 73 SSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIY 132
S+ +N L + QV EM R+G ++ +Y + + G K+ + A++ L M
Sbjct: 460 SAFVNAGLMDRARQV----LAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTE 515
Query: 133 DQCFRMPSYVTYDILIENCS-NNEFKSLVELVKDLRSRGLMNE----------------- 174
D P V+Y+I+I+ C ++ + ++R+RG+
Sbjct: 516 DAGIE-PDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQP 574
Query: 175 --AAKAHDTML-EGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIA 231
A + D M+ + K D +N+L+ +CR ++ A + M GF P++ + +
Sbjct: 575 KLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGS 634
Query: 232 LINALHYVQ 240
L N + +
Sbjct: 635 LANGVSQAR 643
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 68/151 (45%), Gaps = 17/151 (11%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
P ++YN++I GFC+ + + A ++ M +K DV +S+LIN
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASK---GCSPDVV-----------TFSTLIN 53
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
GY +CEM R G ++ +Y ++G + A++ L MI C
Sbjct: 54 GYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI--SCGV 111
Query: 138 MPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
P Y+T+ ++ CS E + +++DL+
Sbjct: 112 APDYITFHCMLAGLCSKKELRKAFAILEDLQ 142
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 94/242 (38%), Gaps = 42/242 (17%)
Query: 7 YNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDL 66
+N V +G YN+++ C ++ AY L+R M K L D
Sbjct: 169 FNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK---GLKPDKRT------ 219
Query: 67 SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEY 126
Y+ L+NG+ + G + A F EM R G++ L + GL AKE
Sbjct: 220 -----YAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 274
Query: 127 LLFMIYDQCFRMPSYVTYDILIENCSN-----------------------NEFKSLVELV 163
+ M +P T++ILIE S + +K+L+ V
Sbjct: 275 VSKMTKGGF--VPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAV 332
Query: 164 KDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFA 223
+ G ++EA + + +E +KP ++Y +I CR D A+ + +M
Sbjct: 333 SKI---GKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 224 PH 225
P+
Sbjct: 390 PN 391
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/322 (21%), Positives = 129/322 (40%), Gaps = 46/322 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFC---RIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLS 67
M ++G PD V+ N++++GFC RI + D M EM K +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTV-------------- 184
Query: 68 YLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL 127
+++LI+G A M++ G D +Y +NGL K+ T A L
Sbjct: 185 ---TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLL 241
Query: 128 LFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLM-------------- 172
M + + V Y +I++ C + L ++ ++G+
Sbjct: 242 NKM--EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299
Query: 173 -----NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
++A++ M+E P+ ++ LI + + KA +Y+EM+ P++F
Sbjct: 300 NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIF 359
Query: 228 SLIALINALHYVQMYNEKSWVIESTLRS-CNLNDSELRKVLNKINVKERSIYPLLEVLAE 286
+ +LIN + E ++E +R C N ++N K + + +E+ E
Sbjct: 360 TYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF-CKAKRVDKGMELFRE 418
Query: 287 IAMDGLLLDGGKCSYASTAASF 308
++ GL+ G +Y + F
Sbjct: 419 MSQRGLV--GNTVTYTTLIHGF 438
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 18 PDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLIN 77
P+ V+YNT+I+GFC+ + + K +L REM + + V Y++LI+
Sbjct: 391 PNVVTYNTLINGFCKAKRVDKGMELFREMSQR--GLVGNTV------------TYTTLIH 436
Query: 78 GYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G+ + A + +M+ +G + +Y + ++GL K + AK ++F +
Sbjct: 437 GFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKL--AKAMVVFEYLQRSTM 494
Query: 138 MPSYVTYDILIEN-CSNNEFK 157
P TY+I+IE C ++K
Sbjct: 495 EPDIYTYNIMIEGMCKAGKWK 515
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 95/237 (40%), Gaps = 37/237 (15%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ +S+ M +G+S + +YN +I+ FCR C+ +
Sbjct: 96 LVISFGEKMEILGISHNLYTYNILINCFCR-----------------CSRLSLALALLGK 138
Query: 63 MEDLSY---LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKAR 119
M L Y + +SL+NG+ A +M+ +GY D ++ ++GL +
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198
Query: 120 TRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAH 179
+A + M+ C P VTY +V L RG + A
Sbjct: 199 ASEAVALIDRMVQRGC--QPDLVTYG---------------AVVNGLCKRGDTDLALNLL 241
Query: 180 DTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ M + + +Y+ +I C+ + D A +++ EM + G P++ + +LI+ L
Sbjct: 242 NKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 298
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 136/343 (39%), Gaps = 70/343 (20%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+ VS M + +S + V+Y +I GFC+ E+++A ++ M
Sbjct: 216 VAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM---------------- 259
Query: 63 MEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKA 118
+ED ++P Y+++I+G+ G+ A F +ML G D +Y + ++GL
Sbjct: 260 VED--RVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNG 317
Query: 119 RTRDAKEYL-----------------LFMIYDQCFRMPSYVT-YDILIENCSNNEFKSLV 160
+ ++A E + + Y + RM + V Y LIE + +L
Sbjct: 318 KLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALS 377
Query: 161 ELVKDLRSRGLMNEA------AKAHDTML---------EGNY---------------KPD 190
++ + G ++EA KA+D M EG++ PD
Sbjct: 378 TMIDGIAKNGQLHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPD 437
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIE 250
+Y I C+ N+ A+ + M+ G + + LI L + E V +
Sbjct: 438 KFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFD 497
Query: 251 STLRSCNLNDSELRKVLNKINVKERSIYPLLEVLAEIAMDGLL 293
L S DS + +L + KE ++ ++L ++ GL+
Sbjct: 498 EMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLV 540
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/304 (19%), Positives = 113/304 (37%), Gaps = 80/304 (26%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDV--HISLMEDLSY 68
M G PD +SYN++I G CR ++R A ++ + A + D+ SL S
Sbjct: 82 MPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSK 141
Query: 69 LD---------------------PYSSLINGYLAEGNFQ--------------------- 86
+ YS+ I+ + G Q
Sbjct: 142 MKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTF 201
Query: 87 --------------VAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIY 132
VA + Y EM R+ S + +Y ++G KK + A+E M+
Sbjct: 202 TCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVE 261
Query: 133 DQCFRMPSYVTYDILIENC-----SNNEFKSLVE---------------LVKDLRSRGLM 172
D+ P+ + Y +I+ S+N K L + ++ L G +
Sbjct: 262 DRV--EPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKL 319
Query: 173 NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIAL 232
EA + + M + + PD ++ ++ + + + A +MY +++ GF P + +L +
Sbjct: 320 KEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTM 379
Query: 233 INAL 236
I+ +
Sbjct: 380 IDGI 383
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 104/239 (43%), Gaps = 39/239 (16%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
+++ + + G +P S+N+V+S C++ +++ A D++ M + + DV IS
Sbjct: 39 LSLKFLAYLVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMP---RFGCEPDV-IS- 93
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYS----SDFDSYCLFMNGLSKKA 118
Y+SLI+G+ G+ + A + E LR + D S+ NG SK
Sbjct: 94 ---------YNSLIDGHCRNGDIRSA-SLVLESLRASHGFICKPDIVSFNSLFNGFSKMK 143
Query: 119 RTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAK 177
+ Y+ M+ +C P+ VTY I+ C + E + A K
Sbjct: 144 MLDEVFVYMGVML--KCCS-PNVVTYSTWIDTFCKSGELQL----------------ALK 184
Query: 178 AHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ +M P+ + LI +C+ +++ A +YKEM + ++ + ALI+
Sbjct: 185 SFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGF 243
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 99/243 (40%), Gaps = 38/243 (15%)
Query: 23 YNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLINGYLAE 82
+N +++G+ R +L++A L EM A M + Y +LI GY
Sbjct: 253 FNILLNGWFRSRKLKQAEKLWEEMKA--------------MNVKPTVVTYGTLIEGYCRM 298
Query: 83 GNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYL-LFMIYDQCFRMPSY 141
Q+A EM +F + ++GL + R +A + F + C P+
Sbjct: 299 RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFV---CESGPTI 355
Query: 142 VTYDILIEN-CSNNEFKSLVELVKDLRSRGL-------------------MNEAAKAHDT 181
VTY+ L++N C + +++K + +RG+ E +
Sbjct: 356 VTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFK 415
Query: 182 MLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQM 241
++E + PD Y+L++ C + A + KEM + G P + + LI+ L ++M
Sbjct: 416 LIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEM 475
Query: 242 YNE 244
E
Sbjct: 476 LEE 478
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 101/253 (39%), Gaps = 40/253 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREM---DAKCNWWLDKDV--------- 58
M M + P V+Y T+I G+CR+ ++ A +++ EM + + N+ + +
Sbjct: 276 MKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGR 335
Query: 59 ---HISLMEDL------SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
+ +ME + Y+SL+ + G+ A M+ G +Y
Sbjct: 336 LSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNH 395
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRS 168
F SK +T + +I + P +TY ++++ C + + +++ K++++
Sbjct: 396 FFKYFSKHNKTEEGMNLYFKLI--EAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKN 453
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
RG+ PD +LI CR +++A++ + + G P +
Sbjct: 454 RGI----------------DPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQYIT 497
Query: 229 LIALINALHYVQM 241
+ N L M
Sbjct: 498 FKMIDNGLRSKGM 510
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 102/241 (42%), Gaps = 49/241 (20%)
Query: 4 TVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
V + ++E L D V +NT++ F R ++L A ++ M L+
Sbjct: 415 AVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSM---------------LV 459
Query: 64 EDLSYLDP--YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTR 121
+ LS LD + +LI+GYL EG + A Y M+++ +S+ Y +NGLSK+
Sbjct: 460 QGLS-LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAG 518
Query: 122 DAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDT 181
A+ + + VTY+ L+ N K+ G + EA D
Sbjct: 519 AAEAVV------NAMEIKDIVTYNTLL----NESLKT-----------GNVEEA----DD 553
Query: 182 MLEGNYKPDG------AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
+L K DG +N++I C+ + +KA ++ K M+ G P + LI +
Sbjct: 554 ILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITS 613
Query: 236 L 236
Sbjct: 614 F 614
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 93/227 (40%), Gaps = 41/227 (18%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G+ PD +YN +I FC +Y ++ EM+ K + P SS
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKG------------------IKPNSS 223
Query: 75 ----LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+I+G+ AE M G + +Y + + L K+ ++++AK L M
Sbjct: 224 SFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM 283
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ P+ VTY LI C+ ++F+ +L K + +RG KP
Sbjct: 284 L--SAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGC----------------KP 325
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
D Y LI+ C+ + + A + KE M + P + +L+N L
Sbjct: 326 DSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 372
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 96/238 (40%), Gaps = 41/238 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G+SPD ++NT+I+GFCR +++ +A L EM + S++
Sbjct: 281 MKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKG-------NKIGPSVVS------ 327
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+++I GYLA + EM G + +Y + GL + +AK L M
Sbjct: 328 -YTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSR---------GLM--------- 172
+ + + +L+ + + E++K + + G++
Sbjct: 387 MAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASA 446
Query: 173 -NEAAKAHDTMLEG--------NYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYG 221
N A K DT++E + + + YN +I C KA +++++M G
Sbjct: 447 YNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRG 504
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 117/282 (41%), Gaps = 43/282 (15%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDL---MREMDAKCNWW------------L 54
VM E P+G + V+ G+CR +R M+EM + N +
Sbjct: 251 VMKEKA-KPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 55 DKD---VHISLMEDLSY---LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
D+D ++LM++ + + YS+++N + + G + A + EM++ G D +Y
Sbjct: 310 DRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+ G + + A+E L +I + P+ V + +I CSN
Sbjct: 370 ILAKGYVRAKEPKKAEELLETLIVES---RPNVVIFTTVISGWCSN-------------- 412
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
G M++A + + M + P+ + L++ + KA ++ + M G P
Sbjct: 413 --GSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENS 470
Query: 228 SLIALINALHYVQMYNEKSWVIESTLRSCNLNDSELRKVLNK 269
+ + L A + +E + I + L+ ++ ++L K+ K
Sbjct: 471 TFLLLAEAWRVAGLTDESNKAINA-LKCKDIEIAKLEKLYQK 511
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 131/340 (38%), Gaps = 49/340 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKD----VHI-----S 61
M + G+ PD + YN +IS FC + + +A ++EM + + +H
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604
Query: 62 LMEDLSYLD------------PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
+ L D ++ LING + + + A EM G S++ +Y
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664
Query: 110 FMNGLSKKARTRDAKEYLLFMIYD-----------------QCFRMPSY--VTYDILIEN 150
M G + T A EY + + + RM S VT ++ N
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 151 CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKA 210
N F + L+ RG + EAA M + KPD Y I + ++++A
Sbjct: 725 IPRNSFVYNI-LIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 211 YDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIESTLRSCNLNDSE------LR 264
+EM G P++ + LI + EK+ +++ + + L
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASL-PEKALSCYEEMKAMGIKPDKAVYHCLLT 842
Query: 265 KVLNKINVKERSIYP-LLEVLAEIAMDGLLLDGGKCSYAS 303
+L++ ++ E IY ++ + E+ GL++D G + S
Sbjct: 843 SLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWS 882
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 121/312 (38%), Gaps = 56/312 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLD--KDVHISLMEDLSY 68
M E G+ V+Y+ ++ GF + A ++W D K +H +L +
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAA-----------DYWFDEAKRIHKTLNASI-- 416
Query: 69 LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
Y +I + N + A EM G + Y M+G + A + K ++
Sbjct: 417 ---YGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVAD--EKKGLVV 471
Query: 129 FMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAH--------- 179
F +C P+ VTY LI N + + ++ K L +M E H
Sbjct: 472 FKRLKECGFTPTVVTYGCLI-----NLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 180 ----------------DTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFA 223
+ M++ KPD +YN +I C N+D+A KEM
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 224 PHMFSLIALINALHYVQMYN-EKSWVIESTLRSCNLNDS--ELRKVLNKINVKERSIYPL 280
P + + +I+ Y + + +S + +R C + ++N + V++R +
Sbjct: 587 PTTRTFMPIIHG--YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGL-VEKRQMEKA 643
Query: 281 LEVLAEIAMDGL 292
+E+L E+ + G+
Sbjct: 644 VEILDEMTLAGV 655
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 36/270 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G P +SY T+I +C+ E K Y+++ EM+A S ++Y
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG----------SPPNSITYTT 299
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
SSL A+ F+ A M R G D Y ++ L++ R +A+
Sbjct: 300 IMSSLN----AQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVE 355
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP- 189
+ + + + ++ C ++E +EL+K++ S L N + +L +K
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 190 --------------------DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
D + Y LI CR + AY +++EM+ P +
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTC 475
Query: 230 IALINALHYVQMYNEKSWVIESTLRSCNLN 259
+ L+ + M+ E + IE +++ L
Sbjct: 476 LLLLEEVKKKNMH-ESAERIEHIMKTVKLT 504
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 105/270 (38%), Gaps = 36/270 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M G P +SY T+I +C+ E K Y+++ EM+A S ++Y
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANG----------SPPNSITYTT 299
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
SSL A+ F+ A M R G D Y ++ L++ R +A+
Sbjct: 300 IMSSLN----AQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVE 355
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP- 189
+ + + + ++ C ++E +EL+K++ S L N + +L +K
Sbjct: 356 MPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRG 415
Query: 190 --------------------DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSL 229
D + Y LI CR + AY +++EM+ P +
Sbjct: 416 DVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTC 475
Query: 230 IALINALHYVQMYNEKSWVIESTLRSCNLN 259
+ L+ + M+ E + IE +++ L
Sbjct: 476 LLLLEEVKKKNMH-ESAERIEHIMKTVKLT 504
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 115/277 (41%), Gaps = 54/277 (19%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
GLSPD V++NT+++ F + + + +EM + + +++ +++
Sbjct: 449 GLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK-RAGFVPERET-------------FNT 494
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQ 134
LI+ Y G+F+ A T Y ML G + D +Y + L++ +++ L M +
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGR 554
Query: 135 CFRMPSYVTYDILIENCSNNE----FKSLVELVKD--LRSRG--------------LMNE 174
C P+ +TY L+ +N + SL E V + R L+ E
Sbjct: 555 C--KPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE 612
Query: 175 AAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
A +A + E + PD N ++ + R V KA + M GF P M A N
Sbjct: 613 AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM----ATYN 668
Query: 235 ALHYVQMYNEKSWVIESTLRSCNLNDSE--LRKVLNK 269
+L Y+ RS + SE LR++L K
Sbjct: 669 SLMYMHS------------RSADFGKSEEILREILAK 693
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 121/284 (42%), Gaps = 57/284 (20%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK-CNWWLDK-DVHISLMEDL-S 67
+ E G S D SY ++IS F R+A ++ ++M+ C L +V +++ + +
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 68 YLDPYSSLINGYLAEGNFQVAYTF-------------------YCEMLRLGYSSDFDSYC 108
+ +SL+ ++G AYT+ + EM G+S D +Y
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRS 168
++ K R ++A + L M+ + PS VTY+ LI + +
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGF--SPSIVTYNSLISAYARD-------------- 362
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
G+++EA + + M E KPD Y L+ R V+ A +++EM + G P+
Sbjct: 363 -GMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN--- 418
Query: 229 LIALINALHYVQMYNEKSWVIESTLRSCNLNDSELRKVLNKINV 272
I NA +++MY + +E+ K+ ++INV
Sbjct: 419 -ICTFNA--FIKMYGNRGKF------------TEMMKIFDEINV 447
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 68/154 (44%), Gaps = 26/154 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M GL PD ++YN++I G C+ +L +A R++ C+
Sbjct: 71 MIRRGLVPDTITYNSMIHGLCKQNKLAQA----RKVSKSCS------------------- 107
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
+++LINGY + +CEM R G ++ +Y ++G + A + M
Sbjct: 108 TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Query: 131 IYDQCFRMPSYVTY-DILIENCSNNEFKSLVELV 163
+ + + S +T+ DIL + CS E + V ++
Sbjct: 168 VSNGVY--SSSITFRDILPQLCSRKELRKAVAML 199
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 104/270 (38%), Gaps = 38/270 (14%)
Query: 16 LSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSL 75
+ PD VS+ +I C + LR+A L+ ++ N D + Y+++
Sbjct: 226 VKPDLVSFTILIDNVCNSKNLREAMYLVSKLG---NAGFKPDCFL-----------YNTI 271
Query: 76 INGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQC 135
+ G+ A Y +M G D +Y + GLSK R +A+ YL M+ D
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMV-DAG 330
Query: 136 FRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGAVY 194
+ P TY L+ C E + L++++ +RG P+ Y
Sbjct: 331 YE-PDTATYTSLMNGMCRKGESLGALSLLEEMEARGCA----------------PNDCTY 373
Query: 195 NLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVIESTLR 254
N L+ C+ +DK ++Y+ M G L+ +L E V + +
Sbjct: 374 NTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVD 433
Query: 255 SCNLNDSELRKVLNKI-----NVKERSIYP 279
S +L+D+ L KE+ + P
Sbjct: 434 SKSLSDASAYSTLETTLKWLKKAKEQGLVP 463
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 102/253 (40%), Gaps = 33/253 (13%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M GL PD V+ + + C + +A DLM+E+ K + D +
Sbjct: 149 LMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHS---PPDTYT--------- 196
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEML-RLGYSSDFDSYCLFMNGLSKKARTRDAKEYLL 128
Y+ L+ + V Y F EM D S+ + ++ + R+A YL+
Sbjct: 197 --YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAM-YLV 253
Query: 129 FMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYK 188
+ + F+ P Y+ +++ F +L S+G +EA + M E +
Sbjct: 254 SKLGNAGFK-PDCFLYNTIMKG-----FCTL--------SKG--SEAVGVYKKMKEEGVE 297
Query: 189 PDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL-HYVQMYNEKSW 247
PD YN LIF + V++A K M+ G+ P + +L+N + + S
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357
Query: 248 VIESTLRSCNLND 260
+ E R C ND
Sbjct: 358 LEEMEARGCAPND 370
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 99/232 (42%), Gaps = 30/232 (12%)
Query: 13 EMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPY 72
++G+ P +YN +I G + + A D+ ++ + + D++ Y
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS-----------TGCIPDVA---TY 823
Query: 73 SSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIY 132
+ L++ Y G + Y EM ++ ++ + ++GL K DA + ++
Sbjct: 824 NFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS 883
Query: 133 DQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDGA 192
D+ F P+ TY LI+ S + G + EA + + ML+ +P+ A
Sbjct: 884 DRDFS-PTACTYGPLIDGLSKS---------------GRLYEAKQLFEGMLDYGCRPNCA 927
Query: 193 VYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNE 244
+YN+LI + D A ++K M+ G P + + L++ L V +E
Sbjct: 928 IYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDE 979
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 30/215 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G P+ YN +I+GF + E A L + M V + DL
Sbjct: 917 MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRM-----------VKEGVRPDLK--- 962
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
YS L++ G ++ E+ G + D Y L +NGL K R +A +
Sbjct: 963 TYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA-----LV 1017
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
++++ + +T D+ N L+ +L G++ EA K ++ + +P+
Sbjct: 1018 LFNE-MKTSRGITPDLYTYN----------SLILNLGIAGMVEEAGKIYNEIQRAGLEPN 1066
Query: 191 GAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPH 225
+N LI + + AY +Y+ M+ GF+P+
Sbjct: 1067 VFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPN 1101
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 111/284 (39%), Gaps = 56/284 (19%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLM-------------------------RE 45
M + G PD V+Y +I C +L A ++ R+
Sbjct: 284 MDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRD 343
Query: 46 MDAKCNWW--LDKDVHISLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSD 103
+D+ +W ++KD H+ + ++ L++ GNF A+ M G +
Sbjct: 344 LDSVKQFWSEMEKDGHVP------DVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPN 397
Query: 104 FDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVEL 162
+Y + GL + R DA E LF + P+ TY + I+ + + S +E
Sbjct: 398 LHTYNTLICGLLRVHRLDDALE--LFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALET 455
Query: 163 VKDLRSRGLM-------------------NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCR 203
+ ++++G+ EA + + + PD YN+++ + +
Sbjct: 456 FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 515
Query: 204 CLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSW 247
+D+A + EMM G P + + +LIN L+ +E +W
Sbjct: 516 VGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDE-AW 558
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 95/227 (41%), Gaps = 31/227 (13%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
VM + G+ P+ +YNT+I G R+ L A +L M++ ++ +Y
Sbjct: 388 VMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG------------VKPTAY- 434
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y I+ Y G+ A + +M G + + + + L+K R R+AK+ +F
Sbjct: 435 -TYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQ--IF 491
Query: 130 MIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
+P VTY+++++ S G ++EA K M+E +P
Sbjct: 492 YGLKDIGLVPDSVTYNMMMKCYSK---------------VGEIDEAIKLLSEMMENGCEP 536
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
D V N LI + VD+A+ M+ M P + + L+ L
Sbjct: 537 DVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGL 583
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 24/180 (13%)
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
Y+ L+NG+ N A + +M+ G D ++ + + GL + + DA + LF +
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIK--LFHV 358
Query: 132 YDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
P+ +Y I+I +D + M A + D M++ +PD
Sbjct: 359 MKSKGPCPNVRSYTIMI---------------RDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL-------HYVQMYNE 244
AVY LI +D Y++ KEM G P + ALI + H ++YN+
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNK 463
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 98/246 (39%), Gaps = 36/246 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M++ + D V YN +I G C + AY M +M + ++ DV
Sbjct: 291 MSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKR---GVNPDVFT---------- 337
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y++LI+ EG F A + M G + D SY + + GL A E+LL M
Sbjct: 338 -YNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 131 IYDQCFRMPSYVTYDILIENCSN-NEFKSLVELVKDLRSRGL------------------ 171
+ +P + ++++I+ + S + ++ + S G+
Sbjct: 397 LKSS--LLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Query: 172 -MNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLI 230
+ +A + M PD YNLL+ C ++ A+ +Y EM+ G P + +
Sbjct: 455 RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514
Query: 231 ALINAL 236
L+ L
Sbjct: 515 ELVRGL 520
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 96/244 (39%), Gaps = 36/244 (14%)
Query: 15 GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSS 74
G+ P +++N +++G C+ + KA L+REM M Y++
Sbjct: 151 GVIPGLITHNHLLNGLCKAGYIEKADGLVREMRE--------------MGPSPNCVSYNT 196
Query: 75 LINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYD- 133
LI G + N A + M + G + + + ++ L +K + + LL I D
Sbjct: 197 LIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDS 256
Query: 134 -QCFRMPSYVTYDILIENCSNNE--------FKSLVE------------LVKDLRSRGLM 172
Q V IL+++C N +K + + +++ L S G M
Sbjct: 257 SQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNM 316
Query: 173 NEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIAL 232
A M++ PD YN LI C+ D+A D++ M + G AP S +
Sbjct: 317 VAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVI 376
Query: 233 INAL 236
I L
Sbjct: 377 IQGL 380
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 89/189 (47%), Gaps = 20/189 (10%)
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
Y+ +I G + GN AY F C+M++ G + D +Y ++ L K+ + +A + L
Sbjct: 303 YNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACD--LHGT 360
Query: 132 YDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
P ++Y ++I+ L G +N A + +ML+ + P+
Sbjct: 361 MQNGGVAPDQISYKVIIQG---------------LCIHGDVNRANEFLLSMLKSSLLPEV 405
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYN-EKSWVIE 250
++N++I + R + A + M+ YG P++++ ALI+ YV+ +W ++
Sbjct: 406 LLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHG--YVKGGRLIDAWWVK 463
Query: 251 STLRSCNLN 259
+ +RS ++
Sbjct: 464 NEMRSTKIH 472
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 99/231 (42%), Gaps = 41/231 (17%)
Query: 13 EMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPY 72
+M + D V YN ++ + +A++L++EM D+ + ++ Y
Sbjct: 381 DMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMK-------DRGIVPDVIN-------Y 426
Query: 73 SSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIY 132
++LI+GY +G A EM+ G S D +Y + ++GL+ R+ E + IY
Sbjct: 427 TTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLA-----RNGHEEEVLEIY 481
Query: 133 DQCFRM------PSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAA--------- 176
+ RM P+ VT ++IE C + K + L + N+A+
Sbjct: 482 E---RMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAG 538
Query: 177 ---KAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAP 224
KA+ + Y +VY L F C ++KA+D+ K+M Y P
Sbjct: 539 LSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEP 589
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 31/187 (16%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G SPD +YN +I+ F R+ E+ +A ++ E++ D ++
Sbjct: 468 MKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELER-------SDCKPDIIS------ 514
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+SLIN G+ A+ + EM G + D +Y M K R A M
Sbjct: 515 -YNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPD 190
+ C P+ VTY+IL++ N G EA + M + PD
Sbjct: 574 LVKGC--QPNIVTYNILLDCLEKN---------------GRTAEAVDLYSKMKQQGLTPD 616
Query: 191 GAVYNLL 197
Y +L
Sbjct: 617 SITYTVL 623
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 33/227 (14%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E D V+YN +++ + R ++A ++ M K +M +
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKK-----------GVMPNAIT-- 388
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+++I+ Y G A + M G + +Y ++ L KK+R+ + + L M
Sbjct: 389 -YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 131 IYDQCFRMPSYVTYDILIENCSNNEFKSLVELV-KDLRSRGLMNEAAKAHDTMLEGNYKP 189
+ C P+ T++ ++ C N V V ++++S G ++P
Sbjct: 448 KSNGC--SPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG----------------FEP 489
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
D +N LI + RC + A MY EM GF + + AL+NAL
Sbjct: 490 DRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNAL 536
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 24/180 (13%)
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
Y+ L+NG+ N A + +M+ G D ++ + + GL + + DA + LF +
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK--LFHV 358
Query: 132 YDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
P+ +Y I+I +D + M A + D M++ +PD
Sbjct: 359 MKSKGPCPNVRSYTIMI---------------RDFCKQSSMETAIEYFDDMVDSGLQPDA 403
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL-------HYVQMYNE 244
AVY LI +D Y++ KEM G P + ALI + H ++YN+
Sbjct: 404 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 463
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 24/180 (13%)
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
Y+ L+NG+ N A + +M+ G D ++ + + GL + + DA + LF +
Sbjct: 300 YTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIK--LFHV 357
Query: 132 YDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKPDG 191
P+ +Y I+I +D + M A + D M++ +PD
Sbjct: 358 MKSKGPCPNVRSYTIMI---------------RDFCKQSSMETAIEYFDDMVDSGLQPDA 402
Query: 192 AVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL-------HYVQMYNE 244
AVY LI +D Y++ KEM G P + ALI + H ++YN+
Sbjct: 403 AVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNK 462
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/235 (21%), Positives = 92/235 (39%), Gaps = 32/235 (13%)
Query: 3 ITVSYNTV--MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHI 60
I ++N V M G+ PD V++NT+ + RI A D++ + + +H
Sbjct: 476 IEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMI----------IPRMLHN 525
Query: 61 SLMEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKART 120
+ ++ +++NGY EG + A F+ M LG + + + G
Sbjct: 526 KVKPNVRTC---GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDM 582
Query: 121 RDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHD 180
E + M ++ P VT+ L+ S S G M + +
Sbjct: 583 DGVGEVVDLM--EEFGVKPDVVTFSTLMNAWS---------------SVGDMKRCEEIYT 625
Query: 181 TMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINA 235
MLEG PD +++L + R +KA + +M +G P++ +I+
Sbjct: 626 DMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 99/239 (41%), Gaps = 42/239 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRK------------------AYDLMREMDAKCNW 52
M E G SPD ++YN ++ R+ ++ + Y+++ + K N
Sbjct: 245 MLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNK 304
Query: 53 WLDKDVHISLMEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
L ++ M+++ +DP Y++LI+G GN + F EM++ G D Y
Sbjct: 305 PLAALTTLNHMKEVG-IDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYT 363
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+ + G AKE M ++P+ TY+ +I C EF+ L+K++
Sbjct: 364 VMITGYVVSGELDKAKEMFREMTVKG--QLPNVFTYNSMIRGLCMAGEFREACWLLKEME 421
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHM 226
SRG P+ VY+ L+ + + +A + +EM+ G H+
Sbjct: 422 SRGC----------------NPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHYVHL 464
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 72 YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMI 131
Y++++N L +++ Y +ML G+S D +Y + + R K +
Sbjct: 222 YNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILL-----WTNYRLGKMDRFDRL 276
Query: 132 YDQCFR---MPSYVTYDILIE--NCSNNEFKSLVEL-----------------VKDLRSR 169
+D+ R P TY+IL+ N +L L + D SR
Sbjct: 277 FDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR 336
Query: 170 GLMNEAAKAH-DTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
EA K D M++ +PD Y ++I + +DKA +M++EM G P++F+
Sbjct: 337 AGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFT 396
Query: 229 LIALINALHYVQMYNEKSWVI-ESTLRSCNLN 259
++I L + E W++ E R CN N
Sbjct: 397 YNSMIRGLCMAGEFREACWLLKEMESRGCNPN 428
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 40/235 (17%)
Query: 3 ITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISL 62
I YN ++ PD +SY +I +C KA ++MR+M K
Sbjct: 163 IPQRYNKII------PDKISYGILIKSYCDSGTPEKAIEIMRQMQGKG------------ 204
Query: 63 MEDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRD 122
ME + ++++++ +G +VA + EM++ G D +Y + + K++ R
Sbjct: 205 MEVTTIA--FTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRIMSAQKESPER- 261
Query: 123 AKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDT 181
KE + M P ++Y+ L+ C RG+++EA K ++
Sbjct: 262 VKELIEEM--SSMGLKPDTISYNYLMTAYCE----------------RGMLDEAKKVYEG 303
Query: 182 MLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ N P+ A + LIF C ++ Y ++K+ ++ P +L L+ L
Sbjct: 304 LEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGL 358
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 91/238 (38%), Gaps = 41/238 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E PD +YNT+I+ CR+ +KA L+ +M + D +
Sbjct: 191 MKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLP-GFRYPPDTYT---------- 239
Query: 71 PYSSLINGYLAEG-----------NFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKAR 119
Y+ LI+ Y G A + EML G+ D +Y ++G K R
Sbjct: 240 -YTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNR 298
Query: 120 TRDAKEYLLFMIYDQCFRMPSYVTYDILIENCS-NNEFKSLVELVKDLRSRGLMNEAAKA 178
A E M C +P+ VTY+ I S NE + +E+++ ++ G
Sbjct: 299 IGRALELFEDMKTKGC--VPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLG-------- 348
Query: 179 HDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
H P + Y LI +A D+ EM+ G P ++ + +AL
Sbjct: 349 HGV-------PGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 39/220 (17%)
Query: 10 VMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
+M G P+ V Y T+I GFC+ + + + EM K ++
Sbjct: 318 LMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQK--------------GVVANT 363
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y+ LI GY G VA + +M D +Y + ++GL + A
Sbjct: 364 ITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKA-----L 418
Query: 130 MIYDQCFRMP---SYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEG 185
MI++ + + VTY I+I+ C + + +L L S+G+
Sbjct: 419 MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGM-------------- 464
Query: 186 NYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPH 225
KP+ Y +I CR + +A ++K+M GF P+
Sbjct: 465 --KPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPN 502
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 26/160 (16%)
Query: 23 YNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLDPYSSLINGYLAE 82
Y +VI+ CR A+ L+ EM +C + D D H YS+LI G E
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEM-TRCGF--DPDAHT-----------YSALIRGLCLE 471
Query: 83 GNFQVAYTFYCEMLRLGYSSD-----FDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCFR 137
G F A E+L + S+ D++ + GL K RT A E M+ + R
Sbjct: 472 GMFTGAM----EVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKK--R 525
Query: 138 MPSYVTYDILIENCSN-NEFKSLVELVKDLRSRGLMNEAA 176
MP+ TY IL+E ++ +E + E++ +LR R ++ + A
Sbjct: 526 MPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNA 565
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 105/264 (39%), Gaps = 40/264 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKC--------NWWLD------- 55
M + G + V+YN ++ G C + L ++ + + K ++ L+
Sbjct: 167 MEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERG 226
Query: 56 KDVHISLMEDL------SYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCL 109
D + L++++ L Y+ L+ G+ EG A + E+ G+ ++ SY +
Sbjct: 227 TDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNI 286
Query: 110 FMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSR 169
+ L R +A L M D R PS VTY+ILI + L
Sbjct: 287 LLRCLCCDGRWEEANSLLAEM--DGGDRAPSVVTYNILINS---------------LAFH 329
Query: 170 GLMNEAAKAHDTMLEGN--YKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
G +A + M +GN ++ YN +I C+ VD EM++ P+
Sbjct: 330 GRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEG 389
Query: 228 SLIALINALHYVQMYNEKSWVIES 251
+ A+ + + E ++I+S
Sbjct: 390 TYNAIGSLCEHNSKVQEAFYIIQS 413
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 40/261 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCR---IEELRKAYDLMREMD--AKCNWWL----------D 55
M +G +P SYN+VI + IE+L ++++E+D + +L D
Sbjct: 503 MVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKND 562
Query: 56 KDVHISL---MEDLSYLDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
+D ++ ME+L L P YSS+I +G A + +ML G D +Y
Sbjct: 563 RDAAFAIIDAMEELG-LRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYM 621
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRS 168
+ +N ++ R +A E + ++ + F PS TY +LI VK
Sbjct: 622 IMINTYARNGRIDEANELVEEVV--KHFLRPSSFTYTVLISG-----------FVK---- 664
Query: 169 RGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFS 228
G+M + + D MLE P+ +Y LI + + ++ ++ M +
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIA 724
Query: 229 LIALINALHYVQMYNEKSWVI 249
I L++ L +K VI
Sbjct: 725 YITLLSGLWRAMARKKKRQVI 745
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 42/241 (17%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSY-- 68
M E G +PD ++YN V+ R+ + + Y L+ EM K + D + L+ L+
Sbjct: 248 MLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM-VKDGFSPDLYTYNILLHHLATGN 306
Query: 69 ----------------LDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYC 108
++P +++LI+G G + F E +++G + D Y
Sbjct: 307 KPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYT 366
Query: 109 LFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+ + G A+E +F + ++P+ TY+ +I C +FK L+K++
Sbjct: 367 VMITGYISGGELEKAEE--MFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 168 SRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMF 227
SRG P+ VY+ L+ V +A+++ K+M+ G H+
Sbjct: 425 SRGC----------------NPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHLI 468
Query: 228 S 228
S
Sbjct: 469 S 469
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/245 (20%), Positives = 99/245 (40%), Gaps = 45/245 (18%)
Query: 8 NTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAK---------CNWWLDKDV 58
N M + G PD V+Y +I+ C+ ++ +A EM+ + C+
Sbjct: 255 NREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGS 314
Query: 59 HISLMEDLSYLD------------PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDS 106
L + L + + Y++L+ Y + AY EM G + +
Sbjct: 315 EKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNART 374
Query: 107 YCLFMNGLSKKARTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKD 165
Y + ++ L + R+++A E +Y P+ TY+I++ C+ +++ +
Sbjct: 375 YDIILHHLIRMQRSKEAYE-----VYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDE 429
Query: 166 LRSRGLMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAP- 224
++ +G++ P +++ LI C +D+A + + EM+ G P
Sbjct: 430 MKGKGVL----------------PGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPP 473
Query: 225 -HMFS 228
HMFS
Sbjct: 474 GHMFS 478
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 118/272 (43%), Gaps = 34/272 (12%)
Query: 11 MTEMGLSPDGVSYNTVISGFCR------IEELRKAYDLM---REMDAKCNWWLDKDVHIS 61
M EM + + V +N++I+GF I+E+ LM E++ N + V ++
Sbjct: 286 MKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQV-LT 344
Query: 62 LMEDLSY---LDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKA 118
LM++ + + YS+++N + + G + A + EM++ G D +Y + G +
Sbjct: 345 LMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAK 404
Query: 119 RTRDAKEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAK 177
+ A+E L +I + P+ V + +I CSN G M++A +
Sbjct: 405 EPKKAEELLETLIVES---RPNVVIFTTVISGWCSN----------------GSMDDAMR 445
Query: 178 AHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALH 237
+ M + P+ + L++ + KA ++ + M G P + + L A
Sbjct: 446 VFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWR 505
Query: 238 YVQMYNEKSWVIESTLRSCNLNDSELRKVLNK 269
+ +E + I + L+ ++ ++L K+ K
Sbjct: 506 VAGLTDESNKAINA-LKCKDIEIAKLEKLYQK 536
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 89/234 (38%), Gaps = 37/234 (15%)
Query: 8 NTVMTEM----GLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLM 63
N V EM G+ PD +YN +I C +Y ++ EM+ K W LM
Sbjct: 166 NRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERK--WIKPTAASFGLM 223
Query: 64 EDLSYLDPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDA 123
I+G+ E F M G +Y + + L K+ ++ +A
Sbjct: 224 ------------IDGFYKEEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEA 271
Query: 124 KEYLLFMIYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLRSRGLMNEAAKAHDTM 182
K + ++ C P+ VTY +LI CS ++EA + M
Sbjct: 272 KALIDGVM--SCRMRPNSVTYSLLIHGFCSEEN----------------LDEAMNLFEVM 313
Query: 183 LEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+ YKPD Y LI C+ + + A + +E M + P + L+N L
Sbjct: 314 VCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGL 367
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 90/227 (39%), Gaps = 31/227 (13%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G P+ V+Y I GFC+ +A L +MD LD D+ + ++
Sbjct: 236 MVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDR-----LDFDITVQIL------- 283
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
++LI+G N A + E+ + G + D +Y M+ L K A + + M
Sbjct: 284 --TTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEM 341
Query: 131 IYDQCFRMPSYVTY-DILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
++ P VT+ + I + EF N + + M E + P
Sbjct: 342 --EEKGIEPDSVTFHSMFIGMMKSKEFG--------------FNGVCEYYQKMKERSLVP 385
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINAL 236
+L+ C V+ D++K M+ G+ PH +L L AL
Sbjct: 386 KTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTAL 432
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 95/241 (39%), Gaps = 37/241 (15%)
Query: 13 EMGLSPDGVSYNTVISGFC---RIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYL 69
E GL + ++ ++ G C RIEE+ + MRE K + +
Sbjct: 256 EDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVF---------------- 299
Query: 70 DPYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLF 129
Y+++I ++EGN + + EM R D +Y + GL K R + Y LF
Sbjct: 300 -AYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVE--RGYELF 356
Query: 130 MIYDQCFRMPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNEAAKAHDTMLEGNYKP 189
M + Y +LIE V D G + A + +++ Y
Sbjct: 357 MEMKGKQILIDREIYRVLIEG-----------FVAD----GKVRSACNLWEDLVDSGYIA 401
Query: 190 DGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALINALHYVQMYNEKSWVI 249
D +YN +I C VDKAY +++ + P +L ++ A + ++ S V+
Sbjct: 402 DIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL 461
Query: 250 E 250
E
Sbjct: 462 E 462
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 91/220 (41%), Gaps = 35/220 (15%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M + G+ PD +SYNT+I +C+ ++++ L+ EM S++ D
Sbjct: 332 MVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGN-----------SVVPDRFTC- 379
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
++ G++ EG A F E+ RL F+ + L ++ + AK +LL
Sbjct: 380 --KVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAK-HLLDR 436
Query: 131 IYDQCFRMPSYVTYDILIENCS-----------------NNEF---KSLVELVKDLRSRG 170
I ++ TY+ LIE+ S N+ K+ L+ L G
Sbjct: 437 IIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIG 496
Query: 171 LMNEAAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKA 210
EA M + KPD + L++ +C+ L+ DKA
Sbjct: 497 RNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKA 536
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 19 DGVSYNTVISGFCRIEELRKAYDLMREM--------DAKCNWWLDKDVHISLMEDLSY-- 68
D V ++ ++ G+ ++ + + + + RE+ CN L+ + + LMED
Sbjct: 165 DPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVY 224
Query: 69 -------LDP----YSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKK 117
+ P ++ L N + + NF+ F +M G+ D +Y ++ ++
Sbjct: 225 SVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRR 284
Query: 118 ARTRDAKEYLLFMIYDQCFR---MPSYVTYDILIENCSNNEFKSLVELVKDLRSRGLMNE 174
R ++A F +Y +R +P VTY LI+ L KD R R E
Sbjct: 285 GRLKEA-----FYLYKIMYRRRVVPDLVTYTSLIKG-----------LCKDGRVR----E 324
Query: 175 AAKAHDTMLEGNYKPDGAVYNLLIFEHCRCLNVDKAYDMYKEMMHYGFAPHMFSLIALIN 234
A + M++ KPD YN LI+ +C+ + ++ + EM+ P F+ ++
Sbjct: 325 AHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVE 384
Query: 235 AL 236
Sbjct: 385 GF 386
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 17/158 (10%)
Query: 11 MTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWWLDKDVHISLMEDLSYLD 70
M E G PD V+YNT++S +CR L++A+ L + M + ++ DL
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRR-----------RVVPDLVT-- 308
Query: 71 PYSSLINGYLAEGNFQVAYTFYCEMLRLGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFM 130
Y+SLI G +G + A+ + M+ G D SY + K+ + +K+ L M
Sbjct: 309 -YTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEM 367
Query: 131 IYDQCFRMPSYVTYDILIEN-CSNNEFKSLVELVKDLR 167
+ + +P T +++E S V V +LR
Sbjct: 368 LGNSV--VPDRFTCKVIVEGFVREGRLLSAVNFVVELR 403
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 105/270 (38%), Gaps = 53/270 (19%)
Query: 1 MYITVSYNTVMTEMGLSPDGVSYNTVISGFCRIEELRKAYDLMREMDAKCNWW------- 53
M + + M G P+ +YN +I+G+C + L A D +M W
Sbjct: 334 MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 54 ----------LDKDVHI-SLMEDL-----SYLDPYSSLINGYLAEGNFQVAYTFYCEMLR 97
D + I +M+D + +DPY+ +I G+ E ++ A F +M +
Sbjct: 394 LIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEK 453
Query: 98 LGYSSDFDSYCLFMNGLSKKARTRDAKEYLLFMIYDQCF---RMPSYVTYDILIENCSNN 154
L + S+ L L +K D K YDQ +PS + LI S +
Sbjct: 454 LFPRAVDRSFKLI--SLCEKGGMDDLKTA-----YDQMIGEGGVPSIIVSHCLIHRYSQH 506
Query: 155 -EFKSLVELVKDLRSRGLMNEAA-------------------KAHDTMLEGNYKPDGAVY 194
+ + +EL+ D+ +RG + ++ K + M E PD Y
Sbjct: 507 GKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESY 566
Query: 195 NLLIFEHCRCLNVDKAYDMYKEMMHYGFAP 224
N L+ E C ++ KA+ ++ M+ P
Sbjct: 567 NPLLEELCVKGDIQKAWLLFSRMVEKSIVP 596