Miyakogusa Predicted Gene
- Lj2g3v1024280.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr2
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TL13_SOYBN |
523 |
85.6 |
93.5 |
(tr|C6TL13) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT5G39940.1 |
389 |
64.9 |
81.8 |
| Symbols: | FAD/NAD(P)-binding oxidoreductase family protein | chr5:15987649-15990561 FORWARD LENGTH=480 |
| Medicago |
Medtr6g011270.1 |
492 |
79.7 |
91.4 |
| HI0933 family flavoprotein | HC | chr6:3110457-3116751 | 20130731 |
| Soybean |
Glyma19g02250.1 |
523 |
85.6 |
93.5 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj2g3v1024280.1 |
length: 291 aa. |
| IPR004792 |
Conserved hypothetical protein CHP00275, flavoprotein HI0933-like |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03486 |
HI0933_like |
3.6e-71 |
2-291 |
| HMMTigr |
TIGR00275 |
TIGR00275: |
1.7e-69 |
2-291 |
| no_ID |
|
| Gene3D |
G3DSA:2.40.30.10 |
no description |
3.8e-22 |
72-173 |
| Gene3D |
G3DSA:3.50.50.60 |
no description |
2.1e-09 |
242-291 |
- Wolf-PSORT
Lj2g3v1024280.1 nucl 5, chlo 4, cyto_nucl 4
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj2g3v1024280.1 |
|