Miyakogusa Predicted Gene

Lj2g3v1024280.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v1024280.1 Non Characterized Hit- tr|C6TL13|C6TL13_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36807
PE,85.52,0,HI0933_like,Conserved hypothetical protein CHP00275,
flavoprotein HI0933-like; TIGR00275: flavoprote,CUFF.36019.1
         (291 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g011270.1 | HI0933 family flavoprotein | HC | chr6:3110457...   492   e-139
Medtr6g011270.2 | HI0933 family flavoprotein | HC | chr6:3110457...   478   e-135

>Medtr6g011270.1 | HI0933 family flavoprotein | HC |
           chr6:3110457-3116751 | 20130731
          Length = 479

 Score =  492 bits (1266), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 232/291 (79%), Positives = 266/291 (91%)

Query: 1   MSEANRTGVSMQTKKTVTGVSILSNGKFLLEVKQQLADHAEHVEADYLLIASGSTRQGYT 60
           M+E  R GVSMQTKK VT VS+LS GKFLLE+KQ  A  +E VE DYLLIA+GS+RQGY 
Sbjct: 173 MTEVQRRGVSMQTKKNVTAVSVLSCGKFLLEIKQLPAGSSEQVEVDYLLIATGSSRQGYE 232

Query: 61  LASQLGHSIVDPVPSLLTFKIEDLRLRELSGVTFPKVKVRLKLDSIQRNIPELAQVGPML 120
           +ASQLGHSIV+P+PSL TFKIEDLRLRELSGV+FPKVKVRLKLDS+Q+NIP+L QVGP+L
Sbjct: 233 IASQLGHSIVEPMPSLFTFKIEDLRLRELSGVSFPKVKVRLKLDSLQKNIPQLTQVGPLL 292

Query: 121 VTHWGLSGPAILRLSAWGARYLFSSGYKGRLIVDFVPDLHLESLKSLLTHHKHQFAKQKV 180
           +THWGLSGPAILRLSAWGARYLFSSGYKGRLIVDF+PD+H+ESLK++++ HK QFAKQKV
Sbjct: 293 ITHWGLSGPAILRLSAWGARYLFSSGYKGRLIVDFIPDVHIESLKTIISRHKLQFAKQKV 352

Query: 181 LNSYPPVFGISKRFWSYVLERQGISGDILWASISNSSLMSVGSLLKECMIEITGKGQFKD 240
           +NS P  FGI+KRFWSY+LERQG+SGDILWASISN++L+S+GSLLK+C  EI GKG FKD
Sbjct: 353 VNSCPLEFGITKRFWSYLLERQGLSGDILWASISNNALISIGSLLKDCTFEIKGKGPFKD 412

Query: 241 EFVTAGGVPLSEISLKTMESKICSHLFFAGEILNVDGVTGGFNFQNAWSGG 291
           EFVTAGGVPLSE+SL TM+SKICS+LFFAGEILNVDGVTGGFNFQNAWSGG
Sbjct: 413 EFVTAGGVPLSEVSLNTMKSKICSNLFFAGEILNVDGVTGGFNFQNAWSGG 463


>Medtr6g011270.2 | HI0933 family flavoprotein | HC |
           chr6:3110457-3116768 | 20130731
          Length = 461

 Score =  478 bits (1230), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 226/285 (79%), Positives = 260/285 (91%)

Query: 1   MSEANRTGVSMQTKKTVTGVSILSNGKFLLEVKQQLADHAEHVEADYLLIASGSTRQGYT 60
           M+E  R GVSMQTKK VT VS+LS GKFLLE+KQ  A  +E VE DYLLIA+GS+RQGY 
Sbjct: 173 MTEVQRRGVSMQTKKNVTAVSVLSCGKFLLEIKQLPAGSSEQVEVDYLLIATGSSRQGYE 232

Query: 61  LASQLGHSIVDPVPSLLTFKIEDLRLRELSGVTFPKVKVRLKLDSIQRNIPELAQVGPML 120
           +ASQLGHSIV+P+PSL TFKIEDLRLRELSGV+FPKVKVRLKLDS+Q+NIP+L QVGP+L
Sbjct: 233 IASQLGHSIVEPMPSLFTFKIEDLRLRELSGVSFPKVKVRLKLDSLQKNIPQLTQVGPLL 292

Query: 121 VTHWGLSGPAILRLSAWGARYLFSSGYKGRLIVDFVPDLHLESLKSLLTHHKHQFAKQKV 180
           +THWGLSGPAILRLSAWGARYLFSSGYKGRLIVDF+PD+H+ESLK++++ HK QFAKQKV
Sbjct: 293 ITHWGLSGPAILRLSAWGARYLFSSGYKGRLIVDFIPDVHIESLKTIISRHKLQFAKQKV 352

Query: 181 LNSYPPVFGISKRFWSYVLERQGISGDILWASISNSSLMSVGSLLKECMIEITGKGQFKD 240
           +NS P  FGI+KRFWSY+LERQG+SGDILWASISN++L+S+GSLLK+C  EI GKG FKD
Sbjct: 353 VNSCPLEFGITKRFWSYLLERQGLSGDILWASISNNALISIGSLLKDCTFEIKGKGPFKD 412

Query: 241 EFVTAGGVPLSEISLKTMESKICSHLFFAGEILNVDGVTGGFNFQ 285
           EFVTAGGVPLSE+SL TM+SKICS+LFFAGEILNVDGVTGGFNFQ
Sbjct: 413 EFVTAGGVPLSEVSLNTMKSKICSNLFFAGEILNVDGVTGGFNFQ 457