Miyakogusa Predicted Gene

Lj2g3v0727390.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7N3V6_SOYBN 1221 74.8 86.7 (tr|K7N3V6) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT3G59140.1 987 62.0 76.8 | Symbols: ATMRP14, MRP14, ABCC10 | multidrug resistance-associated protein 14 | chr3:21863519-21868701 REVERSE LENGTH=1453
Medicago Medtr6g034335.1 1233 76.7 86.0 | ABC transporter family protein | HC | chr6:11741394-11734594 | 20130731
Soybean Glyma20g30490.1 1219 74.8 86.7  
LJGI gnl|LJGI|FS339047 272 91.4 91.4 weakly similar to UniRef100_A7QTU6 Cluster: Chromosome undetermined scaffold_171, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_171, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0727390.1 length: 792 aa.
IPR001140 ABC transporter, transmembrane domain
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00664 ABC_membrane 1.3e-10 69-337
682-777
IPR003439 ABC transporter-like
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 3.9e-15 427-537
ProfileScan PS50893 ABC_TRANSPORTER_2 22.116 387-608
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 1.7e-16 412-585
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 5.6e-14 20-365
653-777
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 510-524
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 13.213 87-350
680-777
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.5e-48 364-594
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 3.5e-13 58-366
680-777
Gene3D G3DSA:3.40.50.300 no description 1.4e-62 389-612
HMMPanther PTHR24223 FAMILY 0 1-777
HMMPanther PTHR24223:SF107SUBFAMILY NOT 0 1-777
Seg seg seg NA 213-222
Wolf-PSORT
Lj2g3v0727390.1	plas 9, golg 2, nucl 1, mito 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0727390.1