Miyakogusa Predicted Gene

Lj2g3v0727390.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0727390.1 Non Chatacterized Hit- tr|I1NH04|I1NH04_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.41913
PE,75.55,0,ABC_TRANSPORTER_1,ABC transporter, conserved site;
ABC_membrane,ABC transporter, transmembrane domai,CUFF.35290.1
         (2379 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Ch...   272   9e-72
gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosom...   192   7e-48

>gnl|LJGI|FS339047 weakly similar to UniRef100_A7QTU6 Cluster: Chromosome undetermined
            scaffold_171, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_171, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (5%)
          Length = 557

 Score =  272 bits (137), Expect = 9e-72
 Identities = 191/209 (91%)
 Strand = Plus / Plus

                                                                        
Query: 1738 ttgatgtcagacggaaaatccctacaatctgctccatatcaccatctattaacttcaagc 1797
            ||||||||||  ||||||||||||||| ||||||| |||||||||||||| || ||||||
Sbjct: 345  ttgatgtcaggtggaaaatccctacaagctgctccttatcaccatctattgacctcaagc 404

                                                                        
Query: 1798 caagaatttcaggacctagtcaatgctcacaaagagactgctggttctgacctgcttgta 1857
            |||| ||||||||| |||||||||||||||||||| |||||||||||||||| |||||||
Sbjct: 405  caaggatttcaggatctagtcaatgctcacaaagaaactgctggttctgaccggcttgta 464

                                                                        
Query: 1858 gatgttacttcttcccagatacattcaaattctggtagagaaattatacaacctttcaaa 1917
            ||||||||||||||||||| || |||||||||||||||||| |||||| || ||| ||||
Sbjct: 465  gatgttacttcttcccagagaccttcaaattctggtagagagattataaaatcttccaaa 524

                                         
Query: 1918 cagaagcagtataaagaattaaatggtga 1946
            |||||||||| ||||| ||||||||||||
Sbjct: 525  cagaagcagtttaaagcattaaatggtga 553


>gnl|LJGI|AU089009 similar to UniRef100_A7QTS7 Cluster: Chromosome undetermined
            scaffold_171, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_171, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (5%)
          Length = 209

 Score =  192 bits (97), Expect = 7e-48
 Identities = 152/171 (88%)
 Strand = Plus / Plus

                                                                        
Query: 1482 gtttccccatggtgacctcactgaaataggcgagagaggagtaaacctaagtggaggtca 1541
            |||||||||||||||||||||||||||||| || |||||||||||||| |||||||| ||
Sbjct: 3    gtttccccatggtgacctcactgaaataggtgaaagaggagtaaacctcagtggaggaca 62

                                                                        
Query: 1542 gaagcagagaattcaactagcccgtgctctttatcagaatgcggatgtatatctcctgga 1601
             |||||| || ||||||| ||||||||||||||||| ||||| |||||||||||  ||||
Sbjct: 63   aaagcagcgagttcaactcgcccgtgctctttatcaaaatgctgatgtatatcttttgga 122

                                                               
Query: 1602 tgatccattcagtgctgtagatgcacacactgccacaaatttgttcaatga 1652
            ||||||| ||| |||||| ||||| || |||||  ||||||||||||||||
Sbjct: 123  tgatccantcantgctgttgatgcgcatactgcttcaaatttgttcaatga 173