Miyakogusa Predicted Gene

Lj2g3v0523330.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr2

Full length sequence(43247325 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SYT8_LOTJA 600 95.4 95.4 (tr|I3SYT8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT4G15093.1 352 65.5 78.4 | Symbols: | catalytic LigB subunit of aromatic ring-opening dioxygenase family | chr4:8618454-8619472 FORWARD LENGTH=269

Medicago Medtr1g077030.1 462 81.6 91.7 | 4,5-DOPA dioxygenase extradiol-like protein | HC | chr1:34375514-34373672 | 20130731

Soybean Glyma09g28490.1 493 77.6 85.5

LJGI gnl|LJGI|TC58137 1756 99.0 99.0 similar to UniRef100_Q949R4 Cluster: 4,5-DOPA dioxygenase extradiol-like protein; n=1; Arabidopsis thaliana|Rep: 4,5-DOPA dioxygenase extradiol-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (90%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj2g3v0523330.1 length: 304 aa.

IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B

method AccNumber shortName E-value location

Biological Process GO:0006725 cellular aromatic compound metabolic process

Molecular Function GO:0008198 ferrous iron binding

Molecular Function GO:0016491 oxidoreductase activity

Gene3D G3DSA:3.40.830.10 no description 4.8e-97 35-298

HMMPfam PF02900 LigB 1.1e-66 43-298

superfamily SSF53213 LigB 2.1e-59 38-299

IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA type

Molecular Function GO:0008270 zinc ion binding

Molecular Function GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen

Biological Process GO:0055114 oxidation-reduction process

HMMPIR PIRSF006157 Extradiol 1.2e-128 36-300

no_ID

HMMPanther PTHR30096 UNCHARACTERIZED 8e-108 28-303

HMMPanther PTHR30096:SF0 UNCHARACTERIZED 8e-108 28-303

Seg seg seg NA 18-30

Wolf-PSORT

Lj2g3v0523330.1 nucl 7, mito 6

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj2g3v0523330.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SYT8_LOTJA	600	95.4	95.4	(tr\|I3SYT8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT4G15093.1	352	65.5	78.4	\| Symbols: \| catalytic LigB subunit of aromatic ring-opening dioxygenase family \| chr4:8618454-8619472 FORWARD LENGTH=269
Medicago	Medtr1g077030.1	462	81.6	91.7	\| 4,5-DOPA dioxygenase extradiol-like protein \| HC \| chr1:34375514-34373672 \| 20130731
Soybean	Glyma09g28490.1	493	77.6	85.5
LJGI	gnl\|LJGI\|TC58137	1756	99.0	99.0	similar to UniRef100_Q949R4 Cluster: 4,5-DOPA dioxygenase extradiol-like protein; n=1; Arabidopsis thaliana\|Rep: 4,5-DOPA dioxygenase extradiol-like protein - Arabidopsis thaliana (Mouse-ear cress), partial (90%)

IPR004183	Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
Lj2g3v0523330.1				length: 304 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0006725	cellular aromatic compound metabolic process
Molecular Function	GO:0008198	ferrous iron binding
Molecular Function	GO:0016491	oxidoreductase activity
Gene3D	G3DSA:3.40.830.10	no description	4.8e-97	35-298
HMMPfam	PF02900	LigB	1.1e-66	43-298
superfamily	SSF53213	LigB	2.1e-59	38-299
IPR014436	Extradiol aromatic ring-opening dioxygenase, DODA type
Molecular Function	GO:0008270	zinc ion binding
Molecular Function	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
Biological Process	GO:0055114	oxidation-reduction process
HMMPIR	PIRSF006157	Extradiol	1.2e-128	36-300
no_ID
HMMPanther	PTHR30096	UNCHARACTERIZED	8e-108	28-303
HMMPanther	PTHR30096:SF0	UNCHARACTERIZED	8e-108	28-303
Seg	seg	seg	NA	18-30