Miyakogusa Predicted Gene

Lj2g3v0286920.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr2
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MIH1_SOYBN 750 86.6 93.9 (tr|K7MIH1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G48900.2 571 63.6 77.9 | Symbols: | single-stranded DNA endonuclease family protein | chr3:18131854-18136239 FORWARD LENGTH=600
Medicago Medtr6g055360.1 735 85.7 91.9 | flap endonuclease GEN-like protein | HC | chr6:19794054-19802253 | 20130731
Soybean Glyma16g31860.1 729 83.2 90.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj2g3v0286920.1 length: 407 aa.
IPR000953 Chromo domain/shadow
method AccNumber shortName E-value location
ProfileScan PS50013 CHROMO_2 9.318 356-407
IPR006084 XPG/Rad2 endonuclease
Molecular Function GO:0004518 nuclease activity    
Biological Process GO:0006281 DNA repair    
FPrintScan PR00853 XPGRADSUPER 1.5e-15 24-38
71-90
129-146
150-170
205-220
HMMPanther PTHR11081 XP-G/RAD2 4e-208 1-407
IPR006085 XPG N-terminal
Molecular Function GO:0004518 nuclease activity    
Biological Process GO:0006281 DNA repair    
HMMPfam PF00752 XPG_N 8.2e-12 1-91
HMMSmart SM00485 Xeroderma 1.2e-13 1-97
IPR006086 XPG-I domain
Molecular Function GO:0004518 nuclease activity    
HMMPfam PF00867 XPG_I 4.6e-15 132-215
HMMSmart SM00484 Xeroderma 1.6e-08 130-200
IPR016197 Chromo domain-like
superfamily SSF54160 Chromo 1.8e-07 358-407
IPR020045 5'-3' exonuclease, C-terminal domain
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003824 catalytic activity    
superfamily SSF47807 5' 2.2e-17 200-337
no_ID  
Gene3D G3DSA:1.10.150.20 no description 1.6e-09 202-245
Gene3D G3DSA:2.40.50.40 no description 6.7e-06 358-407
Gene3D G3DSA:3.40.50.1010 no description 5.3e-41 1-199
HMMPanther PTHR11081:SF17 SUBFAMILY 4e-208 1-407
superfamily SSF88723 PIN 3.5e-47 3-215
Wolf-PSORT
Lj2g3v0286920.1	cyto 6, chlo 2, nucl 2, E.R. 2, plas 1, vacu 1, chlo_mito 1, cysk_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj2g3v0286920.1 Not targeted -67.751 -0.240 -14.453 94.81% -53.058