Miyakogusa Predicted Gene
- Lj1g3v4482340.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KFD6_SOYBN |
600 |
73.6 |
85.8 |
(tr|K7KFD6) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G03030.1 |
410 |
51.7 |
67.7 |
| Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr4:1335942-1337270 REVERSE LENGTH=442 |
| Medicago |
Medtr7g096420.1 |
543 |
68.4 |
81.0 |
| kelch repeat F-box protein | HC | chr7:38685832-38682792 | 20130731 |
| Soybean |
Glyma03g31740.1 |
600 |
73.6 |
85.8 |
|
| LJGI |
gnl|LJGI|TC71702 |
1283 |
99.7 |
99.7 |
weakly similar to UniRef100_Q0V7S6 Cluster: F-box/kelch-repeat protein OR23; n=1; Arabidopsis thaliana|Rep: F-box/kelch-repeat protein OR23 - Arabidopsis thaliana (Mouse-ear cress), partial (39%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v4482340.1 |
length: 403 aa. |
| IPR001810 |
F-box domain, cyclin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| HMMPfam |
PF00646 |
F-box |
4e-05 |
21-59 |
| HMMSmart |
SM00256 |
A |
0.00061 |
24-64 |
| ProfileScan |
PS50181 |
FBOX |
9.180 |
18-64 |
| superfamily |
SSF81383 |
F-box |
1.8e-08 |
21-64 |
| IPR015915 |
Kelch-type beta propeller |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Gene3D |
G3DSA:2.120.10.80 |
no description |
6.7e-29 |
79-381 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1280.50 |
no description |
7.3e-05 |
21-78 |
| HMMPanther |
PTHR24414 |
FAMILY |
7.4e-20 |
20-219 |
| HMMPanther |
PTHR24414:SF14 |
SUBFAMILY |
7.4e-20 |
20-219 |
| Seg |
seg |
seg |
NA |
3-16 |
| superfamily |
SSF117281 |
Kelch |
5.7e-34 |
67-399 |
- Wolf-PSORT
Lj1g3v4482340.1 nucl 10, cyto 2, chlo 1, plas 1, cyto_pero 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v4482340.1 |
|