Miyakogusa Predicted Gene
- Lj1g3v4482340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4482340.1 Non Chatacterized Hit- tr|C5YDM0|C5YDM0_SORBI
Putative uncharacterized protein Sb06g025030
OS=Sorghu,28.44,5e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; Kelch motif,NULL; F-box domain,F-box doma,CUFF.32450.1
(1212 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71702 weakly similar to UniRef100_Q0V7S6 Cluster: F-b... 1283 0.0
gnl|LJGI|FS359451 similar to UniRef100_A7QVR8 Cluster: Chromosom... 954 0.0
>gnl|LJGI|TC71702 weakly similar to UniRef100_Q0V7S6 Cluster: F-box/kelch-repeat
protein OR23; n=1; Arabidopsis thaliana|Rep:
F-box/kelch-repeat protein OR23 - Arabidopsis thaliana
(Mouse-ear cress), partial (39%)
Length = 762
Score = 1283 bits (647), Expect = 0.0
Identities = 653/655 (99%)
Strand = Plus / Plus
Query: 1 atgaattccgattccgactccgatcctcttcctacgacggacgacacggcggcgattcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33 atgaattccgattccgactccgatcctcttcctacgacggacgacacggcggcgattcta 92
Query: 61 atccccggcctcccaaacgacgtcgcagcctcgatcctctctcgtgttccctattcccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 atccccggcctcccaaacgacgtcgcagcctcgatcctctctcgtgttccctattcccac 152
Query: 121 cacgctcgcctcaaatccacgtgcaaggcatggaaaacggtgctctcatcgaaccatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cacgctcgcctcaaatccacgtgcaaggcatggaaaacggtgctctcatcgaaccatttt 212
Query: 181 ctccactccctcaaacgcaaccacctcctctgcatcttcccgcaagacccttccaccgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 ctccactccctcaaacgcaaccacctcctctgcatcttcccgcaagacccttccaccgcc 272
Query: 241 acctcctacctcttcgacccgtccgaggtcgcgtggtgccccctccctcccatgccctgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 acctcctacctcttcgacccgtccgaggtcgcgtggtgccccctccctcccatgccctgc 332
Query: 301 aaccccaatgtctacggcagatgcaacttcgccgccgtggccttcggcgcacacatcgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 333 aaccccaatgtctacggcagatgcaacttcgccgccgtggccttcggcgcacacatctac 392
Query: 361 atcctcggcggttcgcttttcgacgcgcgctctttccccattaaccgcccctccgcttcg 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 393 atcctcggcggttcgcttttcgacgcgcgctctttccccattaaccacccctccgcttcg 452
Query: 421 tcgtccactttccggttcaatttctgtgacttttcatgggagcaccgtgcgcctatgctc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tcgtccactttccggttcaatttctgtgacttttcatgggagcaccgtgcgcctatgctc 512
Query: 481 tcgccgcgtggaagcttcgcctgcgcggcgcttccgtcgaccgggcatattctcgttgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 tcgccgcgtggaagcttcgcctgcgcggcgcttccgtcgaccgggcatattctcgttgcc 572
Query: 541 ggtggtgggtcccgccatgttattttcggtgctgccgggtcgcgtatccggtttgcggag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 ggtggtgggtcccgccatgttattttcggtgctgccgggtcgcgtatccggtttgcggag 632
Query: 601 cggtatgatgtggagagggactgctgggttgcggtggattctctgccggactttc 655
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 cggtatgatgtggagagggactgctgggttgcggtggattctctgccggactttc 687
>gnl|LJGI|FS359451 similar to UniRef100_A7QVR8 Cluster: Chromosome chr7 scaffold_192,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_192, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 759
Score = 954 bits (481), Expect = 0.0
Identities = 493/497 (99%)
Strand = Plus / Minus
Query: 716 acagagcgacgatgacggtttccggggcgtttccagtggatgagtattgtagggatgctg 775
|||| ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 741 acagtgcgtcgaggacggtttccggggtgtttccagtggatgagtattgtagggatgctg 682
Query: 776 tggtgatggggttggaggatggggcgtggagggaggttggagatatgtggggtgatggtg 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tggtgatggggttggaggatggggcgtggagggaggttggagatatgtggggtgatggtg 622
Query: 836 aaaggattagggctgggaagattgttgtggttgatgatcatggctgccccgcggttttca 895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaggattagggctgggaagattgttgtggttgatgatcatggctgccccgcggttttca 562
Query: 896 tgcttgaaatgaatgagattttgagatatgacatgtcttcaaatcgatggctattcgaat 955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgcttgaaatgaatgagattttgagatatgacatgtcttcaaatcgatggctattcgaat 502
Query: 956 ctcgcgtgccaagaagagctcctcacagttcgccatttggttttgttgcagtcgagcatg 1015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctcgcgtgccaagaagagctcctcacagttcgccatttggttttgttgcagtcgagcatg 442
Query: 1016 agctgtatatattgacacactcatacgatgatgattactttagaacacgaaggtccagaa 1075
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agctgtatatattgacacactcatacgatgatgattactttagaacacgaaggtccagaa 382
Query: 1076 actctaagaggactggcaccatgatttttcaaatctataacccgaagaagaagacatgga 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actctaagaggactggcaccatgatttttcaaatctataacccgaagaagaagacatgga 322
Query: 1136 gaactcttgtcacaaaatcacctttcacataccctgtagatattaagaattccgtattga 1195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaactcttgtcacaaaatcacctttcacataccctgtagatattaagaattccgtattga 262
Query: 1196 gctcaatctgtctatga 1212
|||||||||||||||||
Sbjct: 261 gctcaatctgtctatga 245