Miyakogusa Predicted Gene

Lj1g3v3317320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K7U5_SOYBN 1248 84.4 88.7 (tr|K7K7U5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G26370.1 984 68.6 82.5 | Symbols: | RNA helicase family protein | chr1:9122030-9125368 REVERSE LENGTH=717
Medicago Medtr7g095080.1 1195 82.4 89.6 | ATP-dependent RNA helicase DHX35 | HC | chr7:38011601-38003021 | 20130731
Soybean Glyma01g07530.1 1223 86.5 91.1  
LJGI gnl|LJGI|TC65544 1659 99.4 99.4 similar to UniRef100_A7P496 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (40%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3317320.1 length: 723 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 1e-13 329-419
HMMSmart SM00490 helicase 3.7e-18 311-419
ProfileScan PS51194 HELICASE_CTER 16.464 280-459
IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00690 DEAH_ATP_HELICASE NA 162-171
IPR007502 Helicase-associated domain
Molecular Function GO:0004386 helicase activity    
HMMPfam PF04408 HA2 5.8e-21 479-570
HMMSmart SM00847 Helicase 8.4e-24 479-570
IPR011709 Domain of unknown function DUF1605
HMMPfam PF07717 OB_NTP_bind 8.2e-23 629-718
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 4.1e-26 44-271
ProfileScan PS51192 HELICASE_ATP_BIND_1 18.758 56-262
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.6e-103 41-608
no_ID  
Gene3D G3DSA:3.40.50.300 no description 6.8e-13 232-246
285-437
HMMPanther PTHR18934 ATP-DEPENDENT 0 24-723
Seg seg seg NA 101-113
Wolf-PSORT
Lj1g3v3317320.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3317320.1