Miyakogusa Predicted Gene

Lj1g3v3078240.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SL00_LOTJA 675 96.2 96.5 (tr|I3SL00) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G69010.1 181 42.5 57.9 | Symbols: BIM2 | BES1-interacting Myc-like protein 2 | chr1:25941804-25943599 FORWARD LENGTH=311
Medicago Medtr7g017320.1 446 69.9 79.9 | transcription factor BIM2-like protein | HC | chr7:5489064-5495510 | 20130731
Soybean Glyma08g28010.1 509 73.1 83.6  
LJGI gnl|LJGI|TC62782 2026 99.9 99.9 similar to UniRef100_A2Q626 Cluster: Helix-loop-helix DNA-binding; n=1; Medicago truncatula|Rep: Helix-loop-helix DNA-binding - Medicago truncatula (Barrel medic), partial (71%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v3078240.1 length: 341 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 4e-21 45-116
HMMPfam PF00010 HLH 1.9e-13 47-96
HMMSmart SM00353 helix 4.3e-13 51-101
ProfileScan PS50888 BHLH 16.736 45-95
superfamily SSF47459 HLH, 4.4e-19 43-128
no_ID  
Coil coil coiled-coil NA 92-113
HMMPanther PTHR12565 STEROL 8.4e-51 1-304
HMMPanther PTHR12565:SF7 BASIC 8.4e-51 1-304
Seg seg seg NA 10-20
Wolf-PSORT
Lj1g3v3078240.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v3078240.1