Miyakogusa Predicted Gene
- Lj1g3v3078240.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v3078240.1 Non Characterized Hit- tr|B7ZZP8|B7ZZP8_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,60.27,1e-17,no
description,Helix-loop-helix domain; HLH,Helix-loop-helix domain;
helix loop helix domain,Helix-l,CUFF.30001.1
(341 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g017320.1 | transcription factor BIM2-like protein | HC | ... 446 e-125
Medtr7g017320.2 | transcription factor BIM2-like protein | HC | ... 327 1e-89
Medtr5g048350.1 | transcription factor BIM2-like protein | HC | ... 209 3e-54
Medtr4g110040.2 | transcription factor BIM2-like protein | HC | ... 197 9e-51
Medtr4g110040.1 | transcription factor BIM2-like protein | HC | ... 197 1e-50
Medtr4g110040.3 | transcription factor BIM2-like protein | HC | ... 197 1e-50
Medtr5g048350.2 | transcription factor BIM2-like protein | HC | ... 186 3e-47
Medtr4g131160.1 | BHLH transcription factor | HC | chr4:54719229... 57 2e-08
Medtr4g131160.2 | BHLH transcription factor | HC | chr4:54719229... 57 2e-08
Medtr1g084980.1 | phytochrome-interacting factor 3.1 | HC | chr1... 55 8e-08
Medtr1g019240.1 | helix loop helix DNA-binding domain protein | ... 55 9e-08
Medtr8g098275.3 | bHLH transcription factor | HC | chr8:41001796... 55 1e-07
Medtr7g117670.1 | ABA-inducible bHLH-type transcription factor |... 55 1e-07
Medtr8g098275.2 | bHLH transcription factor | HC | chr8:41000355... 54 2e-07
Medtr7g110810.1 | helix loop helix DNA-binding domain protein | ... 54 2e-07
Medtr8g098275.1 | bHLH transcription factor | HC | chr8:41000594... 54 2e-07
Medtr8g027495.1 | ABA-inducible bHLH-type transcription factor |... 53 5e-07
Medtr5g037250.1 | transcription factor | HC | chr5:16271354-1626... 52 7e-07
Medtr3g449770.1 | transcription factor | HC | chr3:16987989-1699... 52 7e-07
Medtr5g017040.1 | helix loop helix DNA-binding domain protein | ... 52 8e-07
Medtr5g030430.1 | basic helix loop helix (bHLH) family transcrip... 52 1e-06
Medtr1g106470.1 | transcription factor | HC | chr1:48147124-4814... 52 1e-06
Medtr5g005110.1 | transcription factor | HC | chr5:277903-279787... 51 2e-06
Medtr8g067280.1 | basic helix loop helix (bHLH) family transcrip... 50 2e-06
Medtr4g067010.1 | basic helix loop helix (bHLH) DNA-binding fami... 50 2e-06
Medtr7g096350.2 | ABA-inducible bHLH-type transcription factor |... 50 3e-06
Medtr7g096350.1 | ABA-inducible bHLH-type transcription factor |... 50 3e-06
Medtr4g098035.1 | basic helix loop helix (bHLH) DNA-binding fami... 50 4e-06
Medtr0246s0050.1 | basic helix loop helix (bHLH) DNA-binding fam... 50 4e-06
Medtr7g111320.1 | phytochrome-interacting factor 3.1 | HC | chr7... 49 5e-06
Medtr3g116770.1 | BHLH transcription factor | HC | chr3:54614928... 49 8e-06
Medtr3g116770.2 | BHLH transcription factor | HC | chr3:54614928... 49 8e-06
>Medtr7g017320.1 | transcription factor BIM2-like protein | HC |
chr7:5489064-5495510 | 20130731
Length = 347
Score = 446 bits (1146), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/349 (69%), Positives = 279/349 (79%), Gaps = 10/349 (2%)
Query: 1 MARSAKGHQXXXXXXXXXXX--FTENTSSSLNKE---KVDEPTKGKRVNPHRSKHSETEQ 55
MARSAKGHQ FT NTSSS+N KVDEP +GKR NPHRSKHSETEQ
Sbjct: 1 MARSAKGHQDEELVDDDDDQDIFTPNTSSSINNNNNVKVDEPIRGKRANPHRSKHSETEQ 60
Query: 56 RRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEGWNQEPTK 115
RRR KINERFQ L+DLIP+ND KRDKAS LLEVI+Y+ FLQEKLQIYE +EGWNQEPTK
Sbjct: 61 RRRSKINERFQALRDLIPENDSKRDKASFLLEVIEYIHFLQEKLQIYEHPYEGWNQEPTK 120
Query: 116 LIPWRNHHGPAEHTTDPSQAIQNGSVIAKNNDISSLLPQNVQNPIESDFSTTTIQKGHTP 175
LIPWRNHHGP+E+TTDPS+AIQNGSV K N +S P+NVQNPI SD +TTI KG TP
Sbjct: 121 LIPWRNHHGPSENTTDPSRAIQNGSVDGK-NIVSPSFPKNVQNPILSD-PSTTIPKGCTP 178
Query: 176 CSATEKVPMTKQMRLDVFDPVVNSGLVTQHVLE-PLSNAGIPSHTEPQVWLSKPNKDKYI 234
S+TE VP+T QMRLD+FDPVV+ G+VTQ +LE P+SN + S+ +PQVWL KPNKD +I
Sbjct: 179 GSSTEVVPLTMQMRLDMFDPVVSGGMVTQQMLELPVSNPDMASNLQPQVWLGKPNKDNHI 238
Query: 235 VPDNTLKEQEELTIE--SGSDSISNAYSQRILDTLTQALQCSGVDLSQASVSVQIDVGRR 292
V DNTLKEQEE+ I+ S SDSIS+AYSQRIL TLTQALQ SGVDLSQ +VSV IDVGRR
Sbjct: 239 VSDNTLKEQEEMKIDSGSESDSISSAYSQRILGTLTQALQSSGVDLSQTNVSVDIDVGRR 298
Query: 293 SNSGLTPSTYSSKGHQNQFLNNQGMACSGGDYCSEDSEQSQKRLRREAS 341
+N+G TP YSSK ++NQF++NQ +ACSG DY SEDSEQS KR RREAS
Sbjct: 299 TNTGFTPCQYSSKSNENQFVSNQAIACSGMDYFSEDSEQSSKRFRREAS 347
>Medtr7g017320.2 | transcription factor BIM2-like protein | HC |
chr7:5489064-5495510 | 20130731
Length = 280
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 186/270 (68%), Positives = 213/270 (78%), Gaps = 10/270 (3%)
Query: 1 MARSAKGHQXXXXXXXXXXX--FTENTSSSLNKE---KVDEPTKGKRVNPHRSKHSETEQ 55
MARSAKGHQ FT NTSSS+N KVDEP +GKR NPHRSKHSETEQ
Sbjct: 1 MARSAKGHQDEELVDDDDDQDIFTPNTSSSINNNNNVKVDEPIRGKRANPHRSKHSETEQ 60
Query: 56 RRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEGWNQEPTK 115
RRR KINERFQ L+DLIP+ND KRDKAS LLEVI+Y+ FLQEKLQIYE +EGWNQEPTK
Sbjct: 61 RRRSKINERFQALRDLIPENDSKRDKASFLLEVIEYIHFLQEKLQIYEHPYEGWNQEPTK 120
Query: 116 LIPWRNHHGPAEHTTDPSQAIQNGSVIAKNNDISSLLPQNVQNPIESDFSTTTIQKGHTP 175
LIPWRNHHGP+E+TTDPS+AIQNGSV K N +S P+NVQNPI SD +TTI KG TP
Sbjct: 121 LIPWRNHHGPSENTTDPSRAIQNGSVDGK-NIVSPSFPKNVQNPILSD-PSTTIPKGCTP 178
Query: 176 CSATEKVPMTKQMRLDVFDPVVNSGLVTQHVLE-PLSNAGIPSHTEPQVWLSKPNKDKYI 234
S+TE VP+T QMRLD+FDPVV+ G+VTQ +LE P+SN + S+ +PQVWL KPNKD +I
Sbjct: 179 GSSTEVVPLTMQMRLDMFDPVVSGGMVTQQMLELPVSNPDMASNLQPQVWLGKPNKDNHI 238
Query: 235 VPDNTLKEQEELTIE--SGSDSISNAYSQR 262
V DNTLKEQEE+ I+ S SDSIS+AYSQR
Sbjct: 239 VSDNTLKEQEEMKIDSGSESDSISSAYSQR 268
>Medtr5g048350.1 | transcription factor BIM2-like protein | HC |
chr5:21194939-21186807 | 20130731
Length = 335
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 184/305 (60%), Gaps = 32/305 (10%)
Query: 47 RSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSH 106
RSKHS TEQRRR KINERFQ+L+DLIPQ DQKRD AS LLEVI+YVQ+LQE++Q YE S+
Sbjct: 46 RSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLEVIEYVQYLQERVQKYEGSY 105
Query: 107 EGWNQEPTKLIPWRNHHGPAEHTTDPSQAIQNGS-----VIAKNND----ISSLLPQNVQ 157
+GW+QEP+KL+PWRN H A++ ++NGS K ++ IS +
Sbjct: 106 QGWSQEPSKLMPWRNSHWRAQNFVGQPPIVKNGSGPVLPFPGKFDENSVGISPTMLSGSH 165
Query: 158 NPIESDFSTTTIQKG--HTPCSATEKVPMTKQMRLDVFDPVVNSGLVTQHVLEPLSNAG- 214
N I+ D + + K P A++ +P+ M ++ PV + G+++ + +S+A
Sbjct: 166 NMIDHDPTRDIVGKTAERQPDLASKGIPLPMAMHANMSVPVRSDGVLSHPLQGTVSDAQS 225
Query: 215 --IPSHTEPQVWLSKPNKDKYIVPDNTLKEQEELTIESGSDSISNAYSQRILDTLTQALQ 272
P+ +E L +Q++LT+E G+ SIS+ YSQ +L+ LTQALQ
Sbjct: 226 TECPTTSE------------------QLNQQDDLTVEGGTISISSVYSQGLLNNLTQALQ 267
Query: 273 CSGVDLSQASVSVQIDVGRRSNSGLTPSTYSSKGHQNQFLNNQGMACSGGDYCSEDSEQS 332
+G+DLS+A++SVQID+G+R+N + + S K H N NQ A EDS+Q+
Sbjct: 268 SAGLDLSKANISVQIDLGKRANKDPSGTASSPKNHDNPLCCNQSFAHFRDGGNREDSDQA 327
Query: 333 QKRLR 337
QKR++
Sbjct: 328 QKRMK 332
>Medtr4g110040.2 | transcription factor BIM2-like protein | HC |
chr4:45819070-45811495 | 20130731
Length = 438
Score = 197 bits (502), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 134/322 (41%), Positives = 187/322 (58%), Gaps = 26/322 (8%)
Query: 33 KVDEPTKGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYV 92
+VD + ++ N RSKHS TEQRRR KIN+RFQ+L++LIP +DQKRDKAS LLEVI+Y+
Sbjct: 122 RVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYI 181
Query: 93 QFLQEKLQIYEQSHEGWNQEPTKLIPWRNHHGPAEH--------TTDPSQAIQNGS-VIA 143
FLQEK+ YE S +GWN EP KL+PWRN+ PAE ++PS + S V
Sbjct: 182 HFLQEKVHKYEGSFQGWNNEPEKLMPWRNNDRPAESFQPRSANGGSNPSPTLLFASKVDE 241
Query: 144 KNNDISSLLPQNVQNPIESDFSTTTIQKG-HTPCSATEKV---PMTKQMRLDVFDPVVNS 199
KN IS + N +ES STTT K P T K P++ Q + S
Sbjct: 242 KNITISPTTHGGIHN-VESSLSTTTALKTIDHPSGITNKAFPSPISSQPNFLTSTQIGGS 300
Query: 200 GLVTQHVLEPLSNAGIPSHTEPQVWLSKPNKDKYIVPDNTLKEQEELTIESGSDSISNAY 259
G + LS+ ++ +P V + + + + +++ELTIE G+ SIS+ Y
Sbjct: 301 GGAVSQLRRRLSSDAENTNYQPSV------ESQTMTSTSEKLKEKELTIEGGAISISSVY 354
Query: 260 SQRILDTLTQALQCSGVDLSQASVSVQIDVGRRSNSGLTPS----TYSSKGHQNQFLNNQ 315
SQ +LDTLTQALQ SGVDLSQAS+SVQI++G++++ L P+ SK ++ N +
Sbjct: 355 SQGLLDTLTQALQSSGVDLSQASISVQIELGKQAS--LRPNIPMPMCVSKDDEDPSKNQR 412
Query: 316 GMACSGGDYCSEDSEQSQKRLR 337
M SE S+Q+ K+L+
Sbjct: 413 KMRSGSRVASSEKSDQALKKLK 434
>Medtr4g110040.1 | transcription factor BIM2-like protein | HC |
chr4:45820056-45811459 | 20130731
Length = 570
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/322 (41%), Positives = 187/322 (58%), Gaps = 26/322 (8%)
Query: 33 KVDEPTKGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYV 92
+VD + ++ N RSKHS TEQRRR KIN+RFQ+L++LIP +DQKRDKAS LLEVI+Y+
Sbjct: 254 RVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYI 313
Query: 93 QFLQEKLQIYEQSHEGWNQEPTKLIPWRNHHGPAEH--------TTDPSQAIQNGS-VIA 143
FLQEK+ YE S +GWN EP KL+PWRN+ PAE ++PS + S V
Sbjct: 314 HFLQEKVHKYEGSFQGWNNEPEKLMPWRNNDRPAESFQPRSANGGSNPSPTLLFASKVDE 373
Query: 144 KNNDISSLLPQNVQNPIESDFSTTTIQKG-HTPCSATEKV---PMTKQMRLDVFDPVVNS 199
KN IS + N +ES STTT K P T K P++ Q + S
Sbjct: 374 KNITISPTTHGGIHN-VESSLSTTTALKTIDHPSGITNKAFPSPISSQPNFLTSTQIGGS 432
Query: 200 GLVTQHVLEPLSNAGIPSHTEPQVWLSKPNKDKYIVPDNTLKEQEELTIESGSDSISNAY 259
G + LS+ ++ +P V + + + + +++ELTIE G+ SIS+ Y
Sbjct: 433 GGAVSQLRRRLSSDAENTNYQPSV------ESQTMTSTSEKLKEKELTIEGGAISISSVY 486
Query: 260 SQRILDTLTQALQCSGVDLSQASVSVQIDVGRRSNSGLTPS----TYSSKGHQNQFLNNQ 315
SQ +LDTLTQALQ SGVDLSQAS+SVQI++G++++ L P+ SK ++ N +
Sbjct: 487 SQGLLDTLTQALQSSGVDLSQASISVQIELGKQAS--LRPNIPMPMCVSKDDEDPSKNQR 544
Query: 316 GMACSGGDYCSEDSEQSQKRLR 337
M SE S+Q+ K+L+
Sbjct: 545 KMRSGSRVASSEKSDQALKKLK 566
>Medtr4g110040.3 | transcription factor BIM2-like protein | HC |
chr4:45820056-45811459 | 20130731
Length = 570
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 134/322 (41%), Positives = 187/322 (58%), Gaps = 26/322 (8%)
Query: 33 KVDEPTKGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYV 92
+VD + ++ N RSKHS TEQRRR KIN+RFQ+L++LIP +DQKRDKAS LLEVI+Y+
Sbjct: 254 RVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYI 313
Query: 93 QFLQEKLQIYEQSHEGWNQEPTKLIPWRNHHGPAEH--------TTDPSQAIQNGS-VIA 143
FLQEK+ YE S +GWN EP KL+PWRN+ PAE ++PS + S V
Sbjct: 314 HFLQEKVHKYEGSFQGWNNEPEKLMPWRNNDRPAESFQPRSANGGSNPSPTLLFASKVDE 373
Query: 144 KNNDISSLLPQNVQNPIESDFSTTTIQKG-HTPCSATEKV---PMTKQMRLDVFDPVVNS 199
KN IS + N +ES STTT K P T K P++ Q + S
Sbjct: 374 KNITISPTTHGGIHN-VESSLSTTTALKTIDHPSGITNKAFPSPISSQPNFLTSTQIGGS 432
Query: 200 GLVTQHVLEPLSNAGIPSHTEPQVWLSKPNKDKYIVPDNTLKEQEELTIESGSDSISNAY 259
G + LS+ ++ +P V + + + + +++ELTIE G+ SIS+ Y
Sbjct: 433 GGAVSQLRRRLSSDAENTNYQPSV------ESQTMTSTSEKLKEKELTIEGGAISISSVY 486
Query: 260 SQRILDTLTQALQCSGVDLSQASVSVQIDVGRRSNSGLTPS----TYSSKGHQNQFLNNQ 315
SQ +LDTLTQALQ SGVDLSQAS+SVQI++G++++ L P+ SK ++ N +
Sbjct: 487 SQGLLDTLTQALQSSGVDLSQASISVQIELGKQAS--LRPNIPMPMCVSKDDEDPSKNQR 544
Query: 316 GMACSGGDYCSEDSEQSQKRLR 337
M SE S+Q+ K+L+
Sbjct: 545 KMRSGSRVASSEKSDQALKKLK 566
>Medtr5g048350.2 | transcription factor BIM2-like protein | HC |
chr5:21194898-21187182 | 20130731
Length = 326
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 175/305 (57%), Gaps = 41/305 (13%)
Query: 47 RSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSH 106
RSKHS TEQRRR KINERFQ+L+DLIPQ DQKRD AS LLE E++Q YE S+
Sbjct: 46 RSKHSVTEQRRRSKINERFQILRDLIPQCDQKRDTASFLLE---------ERVQKYEGSY 96
Query: 107 EGWNQEPTKLIPWRNHHGPAEHTTDPSQAIQNGS-----VIAKNND----ISSLLPQNVQ 157
+GW+QEP+KL+PWRN H A++ ++NGS K ++ IS +
Sbjct: 97 QGWSQEPSKLMPWRNSHWRAQNFVGQPPIVKNGSGPVLPFPGKFDENSVGISPTMLSGSH 156
Query: 158 NPIESDFSTTTIQKG--HTPCSATEKVPMTKQMRLDVFDPVVNSGLVTQHVLEPLSNAG- 214
N I+ D + + K P A++ +P+ M ++ PV + G+++ + +S+A
Sbjct: 157 NMIDHDPTRDIVGKTAERQPDLASKGIPLPMAMHANMSVPVRSDGVLSHPLQGTVSDAQS 216
Query: 215 --IPSHTEPQVWLSKPNKDKYIVPDNTLKEQEELTIESGSDSISNAYSQRILDTLTQALQ 272
P+ +E L +Q++LT+E G+ SIS+ YSQ +L+ LTQALQ
Sbjct: 217 TECPTTSE------------------QLNQQDDLTVEGGTISISSVYSQGLLNNLTQALQ 258
Query: 273 CSGVDLSQASVSVQIDVGRRSNSGLTPSTYSSKGHQNQFLNNQGMACSGGDYCSEDSEQS 332
+G+DLS+A++SVQID+G+R+N + + S K H N NQ A EDS+Q+
Sbjct: 259 SAGLDLSKANISVQIDLGKRANKDPSGTASSPKNHDNPLCCNQSFAHFRDGGNREDSDQA 318
Query: 333 QKRLR 337
QKR++
Sbjct: 319 QKRMK 323
>Medtr4g131160.1 | BHLH transcription factor | HC |
chr4:54719229-54715702 | 20130731
Length = 400
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 39 KGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEK 98
+G+ +PH S E+ RR +I ER + L++L+P N K DKAS+L E+I YV+FLQ +
Sbjct: 200 RGQATDPH----SIAERLRRERIAERMKALQELVP-NANKTDKASMLDEIIDYVKFLQVQ 254
Query: 99 LQIYEQSHEGWNQEPTKLIPWRNHHGPAEHTTDPSQAIQNGSVIAKN 145
+++ S G L+ + G +D Q NG V +N
Sbjct: 255 VKVLSMSRLGGAGAVAPLVADMSSEG----VSDCVQTNGNGGVHPRN 297
>Medtr4g131160.2 | BHLH transcription factor | HC |
chr4:54719229-54715448 | 20130731
Length = 403
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 57/107 (53%), Gaps = 9/107 (8%)
Query: 39 KGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEK 98
+G+ +PH S E+ RR +I ER + L++L+P N K DKAS+L E+I YV+FLQ +
Sbjct: 203 RGQATDPH----SIAERLRRERIAERMKALQELVP-NANKTDKASMLDEIIDYVKFLQVQ 257
Query: 99 LQIYEQSHEGWNQEPTKLIPWRNHHGPAEHTTDPSQAIQNGSVIAKN 145
+++ S G L+ + G +D Q NG V +N
Sbjct: 258 VKVLSMSRLGGAGAVAPLVADMSSEG----VSDCVQTNGNGGVHPRN 300
>Medtr1g084980.1 | phytochrome-interacting factor 3.1 | HC |
chr1:37932621-37937084 | 20130731
Length = 721
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 50 HSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEGW 109
H+ +E+RRR +INE+ + L++LIP N K DKAS+L E I+Y++ LQ LQ+ S
Sbjct: 473 HNLSERRRRDRINEKMRALQELIP-NCNKVDKASMLDEAIEYLKTLQ--LQVQMMSMGAG 529
Query: 110 NQEPTKLIPWRNHHGPAEHTTDPSQ 134
P ++P H A H SQ
Sbjct: 530 LYMPQMMLPAGMQHMHAPHMAAFSQ 554
>Medtr1g019240.1 | helix loop helix DNA-binding domain protein | HC
| chr1:5755377-5757645 | 20130731
Length = 267
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 58/101 (57%), Gaps = 12/101 (11%)
Query: 25 TSSSLNKEKVDEPTKGKRVNPHRSK---------HSETEQRRRIKINERFQVLKDLIPQN 75
+SS+ N E + P+ K P RS H+ +E+RRR KINE+ + L++LIP N
Sbjct: 63 SSSAQNDEGSELPS-SKAAPPPRSSSKRSRAAEFHNLSEKRRRSKINEKLKALQNLIP-N 120
Query: 76 DQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEGWNQEPTKL 116
K DKAS+L E I+Y++ LQ ++Q+ G++ P L
Sbjct: 121 SNKTDKASMLDEAIEYLKQLQLQVQML-MVRNGYSLHPMSL 160
>Medtr8g098275.3 | bHLH transcription factor | HC |
chr8:41001796-41004842 | 20130731
Length = 444
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 8/84 (9%)
Query: 50 HSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEGW 109
H +E+RRR K+NERF L+ ++P N K DK S+L + I+Y++ L++K++ E
Sbjct: 245 HVLSERRRRAKLNERFLTLRSMVPSN-SKDDKVSILDDAIEYLRKLEKKIRELEAQ---- 299
Query: 110 NQEPTKL--IPWRNHHGPAEHTTD 131
+EPT + ++HH E TTD
Sbjct: 300 -REPTGIESRSKKSHHDMVERTTD 322
>Medtr7g117670.1 | ABA-inducible bHLH-type transcription factor | HC
| chr7:48837262-48834876 | 20130731
Length = 574
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 50 HSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEGW 109
H E E++RR K+N+RF L+ ++P N K DKASLL + I Y+ LQ KL+I E E +
Sbjct: 403 HVEAERQRREKLNQRFYALRAVVP-NISKMDKASLLGDAIAYINELQAKLKIMESERESF 461
Query: 110 NQEPTK 115
++
Sbjct: 462 GSSTSR 467
>Medtr8g098275.2 | bHLH transcription factor | HC |
chr8:41000355-41004473 | 20130731
Length = 508
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 8/84 (9%)
Query: 50 HSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEGW 109
H +E+RRR K+NERF L+ ++P N K DK S+L + I+Y++ L++K++ E
Sbjct: 309 HVLSERRRRAKLNERFLTLRSMVPSN-SKDDKVSILDDAIEYLRKLEKKIRELEAQ---- 363
Query: 110 NQEPTKL--IPWRNHHGPAEHTTD 131
+EPT + ++HH E TTD
Sbjct: 364 -REPTGIESRSKKSHHDMVERTTD 386
>Medtr7g110810.1 | helix loop helix DNA-binding domain protein | HC
| chr7:45421992-45424245 | 20130731
Length = 373
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 23 ENTSSSLNKEK-VDEPTKGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDK 81
E T ++ KEK V E + KR + H+ +E++RR KINE+ + LK+LIP N K DK
Sbjct: 185 EETQENIVKEKPVREGNRVKRSYRNAKVHNLSERKRRDKINEKIRALKELIP-NCNKMDK 243
Query: 82 ASLLLEVIQYVQFLQEKLQI 101
AS+L + I Y++ L+ +LQI
Sbjct: 244 ASMLDDAIDYLKTLKLQLQI 263
>Medtr8g098275.1 | bHLH transcription factor | HC |
chr8:41000594-41004473 | 20130731
Length = 601
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 8/84 (9%)
Query: 50 HSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEGW 109
H +E+RRR K+NERF L+ ++P N K DK S+L + I+Y++ L++K++ E
Sbjct: 402 HVLSERRRRAKLNERFLTLRSMVPSN-SKDDKVSILDDAIEYLRKLEKKIRELEAQ---- 456
Query: 110 NQEPTKL--IPWRNHHGPAEHTTD 131
+EPT + ++HH E TTD
Sbjct: 457 -REPTGIESRSKKSHHDMVERTTD 479
>Medtr8g027495.1 | ABA-inducible bHLH-type transcription factor | HC
| chr8:9802803-9805726 | 20130731
Length = 623
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 42 RVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQI 101
RV P H E E++RR K+N+RF L+ ++P N K DKASLL + I Y+ LQ KL+
Sbjct: 453 RVEPL--NHVEAERQRREKLNQRFYALRAVVP-NISKMDKASLLGDAIAYINELQAKLKT 509
Query: 102 YEQSHE 107
E E
Sbjct: 510 MESERE 515
>Medtr5g037250.1 | transcription factor | HC |
chr5:16271354-16268287 | 20130731
Length = 239
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 7/99 (7%)
Query: 23 ENTSSSLNKEKVDEPTKGK---RVNPHRSK----HSETEQRRRIKINERFQVLKDLIPQN 75
EN+S +E DEP K V R + HS E+ RR KI+ER + L+DL+P
Sbjct: 89 ENSSGKHAEETSDEPHPKKDYIHVRARRGQATDSHSLAERARREKISERMKTLQDLVPGC 148
Query: 76 DQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEGWNQEPT 114
++ KA +L E+I Y+Q L +++ E N PT
Sbjct: 149 NKVIGKALVLDEIINYIQSLHHQVEFLSMKLEAVNSRPT 187
>Medtr3g449770.1 | transcription factor | HC |
chr3:16987989-16990900 | 20130731
Length = 511
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 31 KEKVDEPTKGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQ 90
++K + + R N H+ +E+RRR +INE+ + L+ LIP + K DKAS+L E I+
Sbjct: 301 RKKTSQRSGSARRNRAAEVHNLSERRRRDRINEKMKALQQLIPHSS-KTDKASMLEEAIE 359
Query: 91 YVQFLQEKLQI 101
Y++ LQ +LQ+
Sbjct: 360 YLKSLQLQLQV 370
>Medtr5g017040.1 | helix loop helix DNA-binding domain protein | HC
| chr5:6175718-6178846 | 20130731
Length = 344
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 40/52 (76%), Gaps = 1/52 (1%)
Query: 50 HSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQI 101
H+ +E+RRR +INE+ + L++LIP N K DKAS+L E I+Y++ LQ ++Q+
Sbjct: 116 HNLSEKRRRSRINEKMKALQNLIP-NSNKTDKASMLDEAIEYLKQLQLQVQM 166
>Medtr5g030430.1 | basic helix loop helix (bHLH) family
transcription factor | HC | chr5:12884262-12887061 |
20130731
Length = 677
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 50 HSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQSHEG 108
H E E++RR K+N+RF L+ ++P N K DKASLL + I Y+ L+ KLQ E +G
Sbjct: 494 HVEAERQRREKLNQRFYALRAVVP-NVSKMDKASLLGDAISYITELKTKLQKTESDKDG 551
>Medtr1g106470.1 | transcription factor | HC |
chr1:48147124-48145297 | 20130731
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 55/92 (59%), Gaps = 6/92 (6%)
Query: 26 SSSLNKEKVDEPTKGKRV----NPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDK 81
SSSL+ ++ + P G++ +P S ++RR +INER ++L+ L+P N K D
Sbjct: 179 SSSLSPKEHEAPKLGRKSRAASSPATDAQSIYARKRRERINERLRILQTLVP-NGTKVDI 237
Query: 82 ASLLLEVIQYVQFLQEKLQIYEQSHEGWNQEP 113
+++L E +QYV+FLQ ++++ S + W P
Sbjct: 238 STMLEEAVQYVKFLQLQIKLL-SSEDMWMYAP 268
>Medtr5g005110.1 | transcription factor | HC | chr5:277903-279787 |
20130731
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 55/93 (59%), Gaps = 5/93 (5%)
Query: 23 ENTSSSLN--KEKVDEPTKGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRD 80
E++S SLN K+ ++ R P S ++RR +INER ++L++L+P N K D
Sbjct: 207 ESSSLSLNDSAAKLSGKSRSSR-GPATDPQSLYARKRRERINERLKILQNLVP-NGTKVD 264
Query: 81 KASLLLEVIQYVQFLQEKLQIYEQSHEGWNQEP 113
+++L E +QYV+FLQ ++++ S + W P
Sbjct: 265 ISTMLEEAVQYVKFLQLQIKLL-SSDDTWMYSP 296
>Medtr8g067280.1 | basic helix loop helix (bHLH) family
transcription factor | HC | chr8:28079487-28082002 |
20130731
Length = 648
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 50 HSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKLQIYEQS 105
H E E++RR K+N++F L+ ++P N K DKASLL + I Y+ L+ KLQ E S
Sbjct: 463 HVEAERQRREKLNQKFYALRAVVP-NVSKMDKASLLGDAISYINELKSKLQGLESS 517
>Medtr4g067010.1 | basic helix loop helix (bHLH) DNA-binding family
protein | LC | chr4:25238626-25241318 | 20130731
Length = 329
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 36 EPTKGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFL 95
E +KGKR H H E+ RR K+ + F L L+P N +K DK S+L + I+Y++ L
Sbjct: 134 ETSKGKRPRAHGRDHIMAERNRREKLTQTFIALAALVP-NLKKMDKLSILFDTIKYMKEL 192
Query: 96 QEKLQIYEQ 104
+ +L++ E+
Sbjct: 193 KNRLEVVEE 201
>Medtr7g096350.2 | ABA-inducible bHLH-type transcription factor | HC
| chr7:38659023-38661790 | 20130731
Length = 503
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 23 ENTSSSLNKEKVDEPTK-GKRVNPHRSK---HSETEQRRRIKINERFQVLKDLIPQNDQK 78
E++SS L +E+ +P K G++ R + H E E++RR K+N+RF L+ ++P N K
Sbjct: 327 EDSSSPLGEER--KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVP-NISK 383
Query: 79 RDKASLLLEVIQYVQFLQEKLQIYE 103
DKASLL + I ++ LQ+K+++ E
Sbjct: 384 MDKASLLGDAITHITDLQKKIKLME 408
>Medtr7g096350.1 | ABA-inducible bHLH-type transcription factor | HC
| chr7:38659003-38661345 | 20130731
Length = 503
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 23 ENTSSSLNKEKVDEPTK-GKRVNPHRSK---HSETEQRRRIKINERFQVLKDLIPQNDQK 78
E++SS L +E+ +P K G++ R + H E E++RR K+N+RF L+ ++P N K
Sbjct: 327 EDSSSPLGEER--KPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRAVVP-NISK 383
Query: 79 RDKASLLLEVIQYVQFLQEKLQIYE 103
DKASLL + I ++ LQ+K+++ E
Sbjct: 384 MDKASLLGDAITHITDLQKKIKLME 408
>Medtr4g098035.1 | basic helix loop helix (bHLH) DNA-binding family
protein | HC | chr4:40483197-40480627 | 20130731
Length = 342
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 27 SSLNKEKVDEPTKGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLL 86
SS N+ + ++ KR + H H E++RR K+ + F L LIP + +K+DKAS+L
Sbjct: 150 SSKNQNVETKTSQSKRSSAHVKDHIMVERKRREKLGQAFIALATLIP-DLKKKDKASVLA 208
Query: 87 EVIQYVQFLQEKLQIYEQSHEGWNQEPTKLIPWRNHHGPAEHTTDPSQAIQNGSVIA 143
+ I++++ L+E+L I E+ + ++ + ++ + H + AI+ + ++
Sbjct: 209 DTIKHIKELKERLAILEEVGKNTKEDQSMMVCNKPDHCCETESVGDGTAIKVAAKVS 265
>Medtr0246s0050.1 | basic helix loop helix (bHLH) DNA-binding family
protein | HC | scaffold0246:20668-18770 | 20130731
Length = 321
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Query: 27 SSLNKEKVDEPTKGKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLL 86
SS N+ + ++ KR + H H E++RR K+ + F L LIP + +K+DKAS+L
Sbjct: 129 SSKNQNVETKTSQSKRSSAHVKDHIMVERKRREKLGQAFIALATLIP-DLKKKDKASVLA 187
Query: 87 EVIQYVQFLQEKLQIYEQSHEGWNQEPTKLIPWRNHHGPAEHTTDPSQAIQNGSVIA 143
+ I++++ L+E+L I E+ + ++ + ++ + H + AI+ + ++
Sbjct: 188 DTIKHIKELKERLAILEEVGKNTKEDQSMMVCNKPDHCCETESVGDGTAIKVAAKVS 244
>Medtr7g111320.1 | phytochrome-interacting factor 3.1 | HC |
chr7:45695946-45691940 | 20130731
Length = 691
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 40 GKRVNPHRSKHSETEQRRRIKINERFQVLKDLIPQNDQKRDKASLLLEVIQYVQFLQEKL 99
G + N H+ +E+RRR +INER + L++LIP N K DKAS+L E I+Y++ LQ +L
Sbjct: 433 GSKKNRSTEVHNLSERRRRDRINERMRALQELIP-NCNKADKASMLDEAIEYLKSLQLQL 491
Query: 100 QIYEQSHEGWNQEPTKLIPWRNHHGPAEH 128
QI G T +P H A H
Sbjct: 492 QIMSMGGGGLYMPMT--LPAGMQHMHAAH 518
>Medtr3g116770.1 | BHLH transcription factor | HC |
chr3:54614928-54618490 | 20130731
Length = 397
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 22 TENTSSSLNKEKVDEPTKGKRVNPHRSK------HSETEQRRRIKINERFQVLKDLIPQN 75
E+TS+S KV + K ++ + HS E+ RR KI+ER + L+DL+P
Sbjct: 168 AEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 227
Query: 76 DQKRDKASLLLEVIQYVQFLQEKLQI 101
++ KA +L E+I YVQ LQ++++
Sbjct: 228 NKITGKAGMLDEIINYVQSLQKQVEF 253
>Medtr3g116770.2 | BHLH transcription factor | HC |
chr3:54614928-54618493 | 20130731
Length = 398
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 6/86 (6%)
Query: 22 TENTSSSLNKEKVDEPTKGKRVNPHRSK------HSETEQRRRIKINERFQVLKDLIPQN 75
E+TS+S KV + K ++ + HS E+ RR KI+ER + L+DL+P
Sbjct: 168 AEDTSNSKENSKVSDVQKTDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 227
Query: 76 DQKRDKASLLLEVIQYVQFLQEKLQI 101
++ KA +L E+I YVQ LQ++++
Sbjct: 228 NKITGKAGMLDEIINYVQSLQKQVEF 253