Miyakogusa Predicted Gene
- Lj1g3v2894990.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KSH3_MEDTR |
437 |
67.8 |
78.7 |
(tr|G7KSH3) Hydroxyproline-rich glycoprotein-like protein OS=Medicago truncatula GN=MTR_7g080890 PE=4 SV=1 |
| TAIR_pep |
AT3G25480.1 |
238 |
50.6 |
63.5 |
| Symbols: | Rhodanese/Cell cycle control phosphatase superfamily protein | chr3:9235591-9236598 REVERSE LENGTH=264 |
| Medicago |
Medtr7g080890.1 |
437 |
67.8 |
78.7 |
| rhodanese/cell cycle control phosphatase superfamily protein, putative | HC | chr7:30811415-30815919 | 20130731 |
| Soybean |
Glyma18g48200.1 |
394 |
72.2 |
83.7 |
|
| LJGI |
gnl|LJGI|TC62769 |
1905 |
98.0 |
98.0 |
similar to UniRef100_A2Q5X2 Cluster: Rhodanese-like; n=1; Medicago truncatula|Rep: Rhodanese-like - Medicago truncatula (Barrel medic), partial (78%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v2894990.2 |
length: 334 aa. |
| IPR001763 |
Rhodanese-like domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.250.10 |
no description |
3.6e-23 |
129-246 |
| no_ID |
|
| HMMPanther |
PTHR11177 |
CHITINASE |
3.5e-20 |
132-234 |
| HMMPanther |
PTHR11177:SF3 |
CHITINASE |
3.5e-20 |
132-234 |
| Seg |
seg |
seg |
NA |
323-333 |
- Wolf-PSORT
Lj1g3v2894990.2 chlo 6, mito 2, E.R. 2, nucl 1.5, cysk_nucl 1.5, cyto_E.R. 1.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v2894990.2 |
|