Miyakogusa Predicted Gene

Lj1g3v2741270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L6G8_SOYBN 354 88.0 95.8 (tr|I1L6G8) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G42340.1 258 63.7 81.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16930367 REVERSE LENGTH=660
Medicago Medtr7g078330.1 324 80.8 91.2 | plant U-box protein | HC | chr7:29618512-29621844 | 20130731
Soybean Glyma09g39220.1 354 88.0 95.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v2741270.1 length: 190 aa.
IPR000225 Armadillo
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00514 Arm 1.3e-12 146-185
HMMSmart SM00185 Armadillo/beta-catenin-like 1.1e-08 146-186
ProfileScan PS50176 ARM_REPEAT 13.597 157-190
IPR003613 U box domain
Cellular Component GO:0000151 ubiquitin ligase complex    
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Biological Process GO:0016567 protein ubiquitination    
HMMPfam PF04564 U-box 3.5e-27 24-94
HMMSmart SM00504 Modified 8.6e-35 27-90
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 2.1e-21 76-188
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.4e-19 25-75
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 3.2e-13 114-185
no_ID  
HMMPanther PTHR23315 BETA 5.8e-60 1-190
HMMPanther PTHR23315:SF7 ANKYRIN-REPEAT-ARM 5.8e-60 1-190
superfamily SSF57850 RING/U-box 3e-29 24-103
Wolf-PSORT
Lj1g3v2741270.1	cyto 8, nucl 4, cyto_pero 4, cyto_E.R. 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v2741270.1