Miyakogusa Predicted Gene
- Lj1g3v2741270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v2741270.1 Non Chatacterized Hit- tr|K4BNS1|K4BNS1_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.67,0.0006,U-box,U box domain; Arm,Armadillo;
ANKYRIN-REPEAT-ARM DOMAIN PROTEIN,NULL; BETA CATENIN-RELATED
ARMA,CUFF.29729.1
(190 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 | chr5:16928086-16... 258 2e-69
AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 | chr3:20... 185 1e-47
AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 | chr3:17... 179 1e-45
AT1G23030.1 | Symbols: | ARM repeat superfamily protein | chr1:... 166 6e-42
AT1G71020.2 | Symbols: | ARM repeat superfamily protein | chr1:... 159 1e-39
AT1G71020.1 | Symbols: | ARM repeat superfamily protein | chr1:... 158 2e-39
AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 | chr2:12... 157 4e-39
AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 | chr1:10... 147 4e-36
AT5G01830.1 | Symbols: | ARM repeat superfamily protein | chr5:... 139 2e-33
AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23548... 129 2e-30
AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 | chr1:97... 128 3e-30
AT1G24330.1 | Symbols: | ARM repeat superfamily protein | chr1:... 114 3e-26
AT1G49780.1 | Symbols: PUB26 | plant U-box 26 | chr1:18429024-18... 109 1e-24
AT1G67530.2 | Symbols: | ARM repeat superfamily protein | chr1:... 108 2e-24
AT1G67530.1 | Symbols: | ARM repeat superfamily protein | chr1:... 108 2e-24
AT3G19380.1 | Symbols: PUB25 | plant U-box 25 | chr3:6714602-671... 108 2e-24
AT2G23140.2 | Symbols: | RING/U-box superfamily protein with AR... 107 5e-24
AT2G23140.1 | Symbols: | RING/U-box superfamily protein with AR... 107 5e-24
AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 | chr1:34... 104 3e-23
AT1G60190.1 | Symbols: | ARM repeat superfamily protein | chr1:... 103 6e-23
AT2G35930.1 | Symbols: PUB23 | plant U-box 23 | chr2:15083101-15... 101 3e-22
AT3G52450.1 | Symbols: PUB22 | plant U-box 22 | chr3:19440943-19... 100 9e-22
AT5G18320.1 | Symbols: | ARM repeat superfamily protein | chr5:... 98 4e-21
AT5G67340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 97 9e-21
AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 95 2e-20
AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 | senescence-associ... 91 4e-19
AT3G54790.2 | Symbols: | ARM repeat superfamily protein | chr3:... 91 4e-19
AT3G54790.1 | Symbols: | ARM repeat superfamily protein | chr3:... 91 5e-19
AT1G76390.2 | Symbols: | ARM repeat superfamily protein | chr1:... 87 7e-18
AT1G76390.1 | Symbols: | ARM repeat superfamily protein | chr1:... 87 7e-18
AT5G65920.1 | Symbols: | ARM repeat superfamily protein | chr5:... 86 1e-17
AT3G49810.1 | Symbols: | ARM repeat superfamily protein | chr3:... 86 2e-17
AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY p... 86 2e-17
AT5G09800.1 | Symbols: | ARM repeat superfamily protein | chr5:... 84 5e-17
AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 | chr3:64... 82 3e-16
AT4G36550.1 | Symbols: | ARM repeat superfamily protein | chr4:... 80 6e-16
AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 | chr4:11356143... 80 6e-16
AT5G37490.1 | Symbols: | ARM repeat superfamily protein | chr5:... 80 7e-16
AT2G45920.1 | Symbols: | U-box domain-containing protein | chr2... 79 1e-15
AT5G18340.1 | Symbols: | ARM repeat superfamily protein | chr5:... 79 2e-15
AT3G11840.1 | Symbols: PUB24 | plant U-box 24 | chr3:3736578-373... 78 3e-15
AT3G61390.2 | Symbols: | RING/U-box superfamily protein | chr3:... 78 4e-15
AT5G18330.1 | Symbols: | ARM repeat superfamily protein | chr5:... 78 4e-15
AT2G45910.1 | Symbols: | U-box domain-containing protein kinase... 77 6e-15
AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |... 77 8e-15
AT1G01660.1 | Symbols: | RING/U-box superfamily protein | chr1:... 76 1e-14
AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 | chr1:24... 75 3e-14
AT5G58680.1 | Symbols: | ARM repeat superfamily protein | chr5:... 75 4e-14
AT3G01400.1 | Symbols: | ARM repeat superfamily protein | chr3:... 73 1e-13
AT2G19410.1 | Symbols: | U-box domain-containing protein kinase... 72 2e-13
AT5G57035.1 | Symbols: | U-box domain-containing protein kinase... 68 4e-12
AT5G65500.1 | Symbols: | U-box domain-containing protein kinase... 67 7e-12
AT3G49060.1 | Symbols: | U-box domain-containing protein kinase... 66 1e-11
AT3G49060.2 | Symbols: | U-box domain-containing protein kinase... 66 1e-11
AT5G51270.1 | Symbols: | U-box domain-containing protein kinase... 66 2e-11
AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat fam... 66 2e-11
AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat fam... 65 2e-11
AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat fam... 65 2e-11
AT4G25160.1 | Symbols: | U-box domain-containing protein kinase... 64 7e-11
AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 | chr3:17644434-17... 62 2e-10
AT4G16490.1 | Symbols: | ARM repeat superfamily protein | chr4:... 62 2e-10
AT5G40140.1 | Symbols: | RING/U-box superfamily protein with AR... 61 4e-10
AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY p... 60 6e-10
AT5G61550.2 | Symbols: | U-box domain-containing protein kinase... 60 6e-10
AT5G62560.1 | Symbols: | RING/U-box superfamily protein with AR... 60 8e-10
AT5G61560.1 | Symbols: | U-box domain-containing protein kinase... 58 4e-09
AT5G61560.2 | Symbols: | U-box domain-containing protein kinase... 58 4e-09
AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 57 6e-09
AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 | chr3:23556... 57 6e-09
AT5G61550.1 | Symbols: | U-box domain-containing protein kinase... 57 9e-09
AT1G56030.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 1e-08
AT1G01670.1 | Symbols: | RING/U-box superfamily protein | chr1:... 56 1e-08
AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 | chr5:26... 56 2e-08
AT1G08315.1 | Symbols: | ARM repeat superfamily protein | chr1:... 54 5e-08
AT1G15165.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily ... 49 2e-06
AT5G19330.1 | Symbols: ARIA | ARM repeat protein interacting wit... 49 2e-06
AT3G07370.1 | Symbols: ATCHIP, CHIP | carboxyl terminus of HSC70... 48 3e-06
AT5G19330.2 | Symbols: ARIA | ARM repeat protein interacting wit... 47 6e-06
>AT5G42340.1 | Symbols: PUB15 | Plant U-Box 15 |
chr5:16928086-16930367 REVERSE LENGTH=660
Length = 660
Score = 258 bits (658), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 121/190 (63%), Positives = 154/190 (81%), Gaps = 2/190 (1%)
Query: 1 MEESNVIDDPVMPKMLGRSTSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFES 60
+E ++++ PV+ K + +STSL++PHEFLCPITLEIM DPVI+A+GQTYE+ESI+KWF++
Sbjct: 267 LEATDILYQPVINKAITKSTSLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDA 326
Query: 61 SHNTCPKTRQPLAHLQLAPNCALKNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSL 120
H TCPKTRQ L HL LAPN ALKNLI +WCE NNFK+P+K + E K+E+ L
Sbjct: 327 GHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNFKIPEKEVSPDSQN--EQKDEVSLL 384
Query: 121 VESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTA 180
VE+LSS LEEQR++V+++R+L++ENPENRVL+A G IP LVQLLSYPDS IQE+AVT
Sbjct: 385 VEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPLLVQLLSYPDSGIQENAVTT 444
Query: 181 LLNLSIDEGN 190
LLNLSIDE N
Sbjct: 445 LLNLSIDEVN 454
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 111 IENKEEIPSLVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPD 170
I N+ IP+++E L + + E + + + LS + EN+V + GIPPLV LL +
Sbjct: 458 ISNEGAIPNIIEILENGNREARENSAAALFSLSMLD-ENKVTIGLSNGIPPLVDLLQHGT 516
Query: 171 SKIQEHAVTALLNLSIDEGN 190
+ ++ A+TAL NLS++ N
Sbjct: 517 LRGKKDALTALFNLSLNSAN 536
>AT3G54850.1 | Symbols: ATPUB14, PUB14 | plant U-box 14 |
chr3:20321524-20323848 FORWARD LENGTH=632
Length = 632
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 130/198 (65%), Gaps = 14/198 (7%)
Query: 3 ESNVIDDPVMPKMLGRSTSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSH 62
ES+ D +++ R S VIP F CPI+LE+M DPVIV++GQTYER SI+KW ++ H
Sbjct: 227 ESSDPDPSTGSRIVSRHRSPVIPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGH 286
Query: 63 NTCPKTRQPLAHLQLAPNCALKNLIEEWCESNNFKLPKKYTAAQESCPIE---------- 112
TCPK+++ L H L PN LK+LI WCESN +LP+ Q SC
Sbjct: 287 KTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELPQN----QGSCRTTKIGGSSSSDC 342
Query: 113 NKEEIPSLVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSK 172
++ + SL+E L++ E+QR A ++R+L+K N +NRV +AE G IP LV+LLS PD +
Sbjct: 343 DRTFVLSLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPR 402
Query: 173 IQEHAVTALLNLSIDEGN 190
QEH+VTALLNLSI+EGN
Sbjct: 403 TQEHSVTALLNLSINEGN 420
>AT3G46510.1 | Symbols: PUB13, ATPUB13 | plant U-box 13 |
chr3:17124106-17126539 REVERSE LENGTH=660
Length = 660
Score = 179 bits (453), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 120/174 (68%), Gaps = 7/174 (4%)
Query: 23 VIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCA 82
VIP +F CPI+LE+M DPVIV+SGQTYER IEKW E H+TCPKT+Q L L PN
Sbjct: 255 VIPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYV 314
Query: 83 LKNLIEEWCESNNFKLPKKYTA------AQESCPIENKEEIPSLVESLSSIHLEEQRKAV 136
L++LI +WCE+N+ + PK ++ + S P E +I L+ L+ + E+QR A
Sbjct: 315 LRSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAE-ANKIEDLMWRLAYGNPEDQRSAA 373
Query: 137 EKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSIDEGN 190
+IR+L+K N +NRV +AE G IP LV LLS PDS+IQEH+VTALLNLSI E N
Sbjct: 374 GEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENN 427
>AT1G23030.1 | Symbols: | ARM repeat superfamily protein |
chr1:8156745-8158842 FORWARD LENGTH=612
Length = 612
Score = 166 bits (421), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
Query: 18 RSTSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQL 77
+S L IP +FLCP++LE+M DPVIVA+GQTYER I++W + + TCPKT+Q L + L
Sbjct: 235 KSDKLTIPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTL 294
Query: 78 APNCALKNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVE 137
PN L++LI WC +N + P Y + + I +LV+ LSS E++R AV
Sbjct: 295 TPNYVLRSLISRWCAEHNIEQPAGYINGRTKNS-GDMSVIRALVQRLSSRSTEDRRNAVS 353
Query: 138 KIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSIDEGN 190
+IR LSK + +NR+L+AE G IP LV LL+ D QE+A+T +LNLSI E N
Sbjct: 354 EIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYENN 406
>AT1G71020.2 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26792357 REVERSE LENGTH=480
Length = 480
Score = 159 bits (401), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 118/181 (65%), Gaps = 8/181 (4%)
Query: 18 RSTSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQL 77
+S +L IP +FLCPI+LE+M DP IV++GQTYER I++W + + +CPKT+Q L + L
Sbjct: 89 KSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTL 148
Query: 78 APNCALKNLIEEWCESNNFKLPKKYTAAQESCPIENKEE-------IPSLVESLSSIHLE 130
PN L++LI +WC +N + P Y + + + I +LV LSS +E
Sbjct: 149 TPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIE 208
Query: 131 EQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLL-SYPDSKIQEHAVTALLNLSIDEG 189
++R AV +IR LSK + +NR+L+AE G IP LV+LL S D++ QE+AVT +LNLSI E
Sbjct: 209 DRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEH 268
Query: 190 N 190
N
Sbjct: 269 N 269
>AT1G71020.1 | Symbols: | ARM repeat superfamily protein |
chr1:26790825-26793105 REVERSE LENGTH=628
Length = 628
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 118/181 (65%), Gaps = 8/181 (4%)
Query: 18 RSTSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQL 77
+S +L IP +FLCPI+LE+M DP IV++GQTYER I++W + + +CPKT+Q L + L
Sbjct: 237 KSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTL 296
Query: 78 APNCALKNLIEEWCESNNFKLPKKYTAAQESCPIENKEE-------IPSLVESLSSIHLE 130
PN L++LI +WC +N + P Y + + + I +LV LSS +E
Sbjct: 297 TPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQSIE 356
Query: 131 EQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLL-SYPDSKIQEHAVTALLNLSIDEG 189
++R AV +IR LSK + +NR+L+AE G IP LV+LL S D++ QE+AVT +LNLSI E
Sbjct: 357 DRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVTCILNLSIYEH 416
Query: 190 N 190
N
Sbjct: 417 N 417
>AT2G28830.1 | Symbols: PUB12, AtPUB12 | PLANT U-BOX 12 |
chr2:12367001-12370608 REVERSE LENGTH=962
Length = 962
Score = 157 bits (397), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/174 (48%), Positives = 115/174 (66%), Gaps = 9/174 (5%)
Query: 22 LVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNC 81
L+ P EF CPI+LE+MTDPVIV+SGQTYERE I+KW E H TCPKT++ L + PN
Sbjct: 254 LIPPEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNY 313
Query: 82 ALKNLIEEWCESNNFKLPKK--------YTAAQESCPIENKEEIPSLVESLSSIHLEEQR 133
L++LI +WCESN + PK+ ++ S P + +I L+ L+S E++R
Sbjct: 314 VLRSLIAQWCESNGIEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPEDRR 373
Query: 134 KAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYP-DSKIQEHAVTALLNLSI 186
A +IR+L+K+N NRV +A G IP LV LL+ DS+ QEHAVT++LNLSI
Sbjct: 374 SAAGEIRLLAKQNNHNRVAIAASGAIPLLVNLLTISNDSRTQEHAVTSILNLSI 427
>AT1G29340.1 | Symbols: PUB17, ATPUB17 | plant U-box 17 |
chr1:10264412-10266601 FORWARD LENGTH=729
Length = 729
Score = 147 bits (371), Expect = 4e-36, Method: Composition-based stats.
Identities = 76/181 (41%), Positives = 111/181 (61%), Gaps = 10/181 (5%)
Query: 20 TSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAP 79
T + +P +F+CPI+L++MTDPVI+++GQTY+R SI +W E H TCPKT Q L ++ P
Sbjct: 301 TFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVP 360
Query: 80 NCALKNLIEEWCESNNFKLPKKYT---------AAQESCPIE-NKEEIPSLVESLSSIHL 129
N ALKNLI +WC ++ ++T A +E NK + L++ L+
Sbjct: 361 NRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQ 420
Query: 130 EEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSIDEG 189
Q A +IR+L+K ENR +AE G IP L +LL+ ++ QE++VTA+LNLSI E
Sbjct: 421 AAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEK 480
Query: 190 N 190
N
Sbjct: 481 N 481
>AT5G01830.1 | Symbols: | ARM repeat superfamily protein |
chr5:320983-323007 FORWARD LENGTH=674
Length = 674
Score = 139 bits (349), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/169 (43%), Positives = 98/169 (57%), Gaps = 2/169 (1%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
IP +F CPITLE+M DPV+VA+GQTY+RESI+ W +S HNTCPKT Q L H L PN AL
Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVES--LSSIHLEEQRKAVEKIRM 141
KNLI WC E P + E ++ S + + + + V ++R
Sbjct: 334 KNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNGVVFELRA 393
Query: 142 LSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSIDEGN 190
L+K + R +AE G IP LV+ L+ +Q +AVT +LNLSI E N
Sbjct: 394 LAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQN 442
>AT3G07360.1 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2354884-2356613 FORWARD LENGTH=460
Length = 460
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 118/201 (58%), Gaps = 16/201 (7%)
Query: 5 NVIDDPVMPKMLGRSTSLVI------PHEFLCPITLEIMTDPVIVASGQTYERESIEKWF 58
+ + + M KM +S+SL + P EF CP++ E+M DPV++ASGQTY++ I+KW
Sbjct: 50 SALREATMRKM-AKSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWL 108
Query: 59 ESSHNTCPKTRQPLAHLQLAPNCALKNLIEEWCESNNFKLPKKY----TAAQESCPIENK 114
S + TCPKT+Q L H L PN ++ +I +WC+ N + +Y E+ ++
Sbjct: 109 SSGNRTCPKTQQVLPHTALTPNLLIREMISKWCKKNGLETKSQYHPNLVNEDETVTRSDR 168
Query: 115 EEIPSLVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEH-GGIPPLVQLL---SYPD 170
E SL+ +SS +L++Q+ A +++R+L+++ E R L E I LV L S PD
Sbjct: 169 EIFNSLLCKVSSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLHGSNPD 228
Query: 171 SKIQEHAVTALLNLSI-DEGN 190
K+QE VT LLN+SI D+ N
Sbjct: 229 EKLQEDVVTTLLNISIHDDSN 249
>AT1G27910.1 | Symbols: PUB45, ATPUB45 | plant U-box 45 |
chr1:9720962-9723975 REVERSE LENGTH=768
Length = 768
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 113/227 (49%), Gaps = 57/227 (25%)
Query: 18 RSTSLVIP-HEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQ 76
RS+ + +P E CPI+L++M DPVI+ASGQTYER IEKWF HNTCPKT Q L+HL
Sbjct: 272 RSSQMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLC 331
Query: 77 LAPNCALKNLIEEWCESNNFKLP------------------------------------- 99
L PN +K LI WCE N ++P
Sbjct: 332 LTPNYCVKALISSWCEQNGVQVPDGPPESLDLNYWRLALSVSESTDTRSAKRVGSCKLKD 391
Query: 100 -------KKYTAAQESCPIENKEEIPSLVESLSSI--------HLEEQRKAVEKIRMLSK 144
+ T +E+C E +E+ +LVE + + L ++ + VE+IR+L K
Sbjct: 392 VKVVPLEESGTIKEEACESEYQEDQVTLVERCTELLTTLTDVDTLRKKCRVVEQIRVLLK 451
Query: 145 ENPENRVLVAEHGGIPPLVQLLSYP----DSKIQEHAVTALLNLSID 187
++ E R+L+ E+G + L+Q L ++ Q+ AL NL++D
Sbjct: 452 DDEEARILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVD 498
>AT1G24330.1 | Symbols: | ARM repeat superfamily protein |
chr1:8631779-8634835 FORWARD LENGTH=771
Length = 771
Score = 114 bits (285), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 100/225 (44%), Gaps = 62/225 (27%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P E CPI+L++M DPVI+ASGQTYER IEKWF HN+CPKT+Q L HL L PN +K
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 85 NLIEEWCESNNFKLPKK---------YTAAQESCPIENKEEIPSL------------VES 123
LI WCE N +P + A N + + S+ +E
Sbjct: 336 GLIASWCEQNGITVPTGPPESLDLNYWRLAMSDSESPNSKSVDSVGLCTPKDIRVVPLEE 395
Query: 124 LSSIHLEEQRK-------------------------------------AVEKIRMLSKEN 146
S+I E Q+K VE +R+L K+N
Sbjct: 396 SSTIESERQQKEKNNAPDEVDSEINVLEGYQDILAIVDKEEDLAKKCKVVENVRILLKDN 455
Query: 147 PENRVLVAEHGGIPPLVQLLSYP----DSKIQEHAVTALLNLSID 187
E R+L+ +G + +Q L ++ QE AL NL+++
Sbjct: 456 EEARILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVN 500
>AT1G49780.1 | Symbols: PUB26 | plant U-box 26 |
chr1:18429024-18430289 REVERSE LENGTH=421
Length = 421
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
IP+ F CPI+L++M+DPV +++GQTY+R SI+ W + TCP TR L+ L PN L
Sbjct: 14 IPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDFTLIPNHTL 73
Query: 84 KNLIEEWCESNNFKLPKKY-TAAQESCPIENKEEIPSLVESLSSIHLEEQRK--AVEKIR 140
+ LI+EWC +N ++ T Q + PI + + S +++ H+ + + A+ ++R
Sbjct: 74 RRLIQEWCVANRSNGVERIPTPKQPADPISVR-SLLSQASAITGTHVSVRSRAAAIRRLR 132
Query: 141 MLSKENPENRVLVAEHGGIPPLVQLL 166
L++++ +NRVL+A H LV++L
Sbjct: 133 GLARDSEKNRVLIAGHNAREILVRIL 158
>AT1G67530.2 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 23 VIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCA 82
V P E CPI+L++M DPVI+ASGQTYER IEKWF HNTCPKT+Q L H+ L PN
Sbjct: 271 VPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNC 330
Query: 83 LKNLIEEWCESNNFKLP 99
+K LI WCE N ++P
Sbjct: 331 VKGLIASWCEQNGTQIP 347
>AT1G67530.1 | Symbols: | ARM repeat superfamily protein |
chr1:25308229-25311081 FORWARD LENGTH=782
Length = 782
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/77 (59%), Positives = 55/77 (71%)
Query: 23 VIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCA 82
V P E CPI+L++M DPVI+ASGQTYER IEKWF HNTCPKT+Q L H+ L PN
Sbjct: 271 VPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNC 330
Query: 83 LKNLIEEWCESNNFKLP 99
+K LI WCE N ++P
Sbjct: 331 VKGLIASWCEQNGTQIP 347
>AT3G19380.1 | Symbols: PUB25 | plant U-box 25 |
chr3:6714602-6715867 REVERSE LENGTH=421
Length = 421
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 97/172 (56%), Gaps = 5/172 (2%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHN-TCPKTRQPLAHLQLAPNCA 82
IP+ F CPI+LE+M DPV V +GQTY+R SIE W +N TCP TR PL+ L PN
Sbjct: 14 IPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDFTLIPNHT 73
Query: 83 LKNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRK--AVEKIR 140
L+ LI+EWC +N ++ ++ + + S +++ H+ + + A+ ++R
Sbjct: 74 LRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHVSVRSRAAALRRLR 133
Query: 141 MLSKENPENRVLVAEHGGIPPLVQLL--SYPDSKIQEHAVTALLNLSIDEGN 190
++++ +NRVL+A H L+++L S++ ++ L+ L I E N
Sbjct: 134 GFARDSDKNRVLIAAHNATEILIKILFSETTSSELVSESLALLVMLPITEPN 185
>AT2G23140.2 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9848762 REVERSE LENGTH=826
Length = 826
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 18 RSTSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQL 77
+++S+ I +F CP++LE+MTDPVIV+SGQTYE+ I++W + CPKTRQ L H L
Sbjct: 224 QTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTL 283
Query: 78 APNCALKNLIEEWCESNNFKL--PKKYTAAQESCPIEN-KEEIPSLVESLSS 126
PN +K LI WCE+N+ KL P K T+ E P+ + + IPS +S+
Sbjct: 284 IPNYTVKALIANWCETNDVKLPDPNKSTSLNELSPLLSCTDSIPSTGADVSA 335
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 116 EIPSLVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQE 175
++ LVE L S L+ QR+A ++R+L+K N +NR+++ G I LV+LL DS QE
Sbjct: 542 QVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQE 601
Query: 176 HAVTALLNLSIDEGN 190
+AVTALLNLSI++ N
Sbjct: 602 NAVTALLNLSINDNN 616
>AT2G23140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr2:9845696-9849105 REVERSE LENGTH=829
Length = 829
Score = 107 bits (267), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 73/112 (65%), Gaps = 3/112 (2%)
Query: 18 RSTSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQL 77
+++S+ I +F CP++LE+MTDPVIV+SGQTYE+ I++W + CPKTRQ L H L
Sbjct: 227 QTSSVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTL 286
Query: 78 APNCALKNLIEEWCESNNFKL--PKKYTAAQESCPIEN-KEEIPSLVESLSS 126
PN +K LI WCE+N+ KL P K T+ E P+ + + IPS +S+
Sbjct: 287 IPNYTVKALIANWCETNDVKLPDPNKSTSLNELSPLLSCTDSIPSTGADVSA 338
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 52/75 (69%)
Query: 116 EIPSLVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQE 175
++ LVE L S L+ QR+A ++R+L+K N +NR+++ G I LV+LL DS QE
Sbjct: 545 QVKKLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQE 604
Query: 176 HAVTALLNLSIDEGN 190
+AVTALLNLSI++ N
Sbjct: 605 NAVTALLNLSINDNN 619
>AT1G10560.1 | Symbols: PUB18, ATPUB18 | plant U-box 18 |
chr1:3484613-3486706 FORWARD LENGTH=697
Length = 697
Score = 104 bits (260), Expect = 3e-23, Method: Composition-based stats.
Identities = 61/168 (36%), Positives = 101/168 (60%), Gaps = 9/168 (5%)
Query: 27 EFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALKNL 86
+ LCPI+LEIMTDPV++ +G TY+R SI KWF S + TCP T + L +L N +++ +
Sbjct: 291 DLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQV 350
Query: 87 IEEWCESNNFKL---PKKYTAAQESCP--IENKEEIPSLVESLSS--IHLEEQR--KAVE 137
I + C++N L ++ + + P + K + + L+S I+ E+ +AV
Sbjct: 351 IRKHCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVR 410
Query: 138 KIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLS 185
+IR+ +K + NR + + G + PL++LLS D +IQE+A+ +LNLS
Sbjct: 411 EIRVQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLS 458
>AT1G60190.1 | Symbols: | ARM repeat superfamily protein |
chr1:22198403-22200463 FORWARD LENGTH=686
Length = 686
Score = 103 bits (258), Expect = 6e-23, Method: Composition-based stats.
Identities = 61/163 (37%), Positives = 93/163 (57%), Gaps = 5/163 (3%)
Query: 30 CPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALKNLIEE 89
CPI+LEIM+DPV++ SG TY+R SI KWF S + TCPKT + L L N ++K +I+
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQS 343
Query: 90 WCESNNFKL---PKKYTAAQESCPIENKEEIPS--LVESLSSIHLEEQRKAVEKIRMLSK 144
+ + N + KK ES E ++ + L L EE KA+ +IR+L+K
Sbjct: 344 YSKQNGVVMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEEMVKALVEIRILTK 403
Query: 145 ENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSID 187
+ R + E G + L+++L D +IQE+A+ ++NLS D
Sbjct: 404 TSTFYRSCLVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKD 446
>AT2G35930.1 | Symbols: PUB23 | plant U-box 23 |
chr2:15083101-15084336 REVERSE LENGTH=411
Length = 411
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/170 (37%), Positives = 95/170 (55%), Gaps = 11/170 (6%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKW-FESSHNTCPKTRQPLAHLQLAPNCA 82
IP FLCPI+LEIM DPVIV++G TY+R+SIEKW F N+CP T+Q + L PN
Sbjct: 12 IPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLTPNHT 71
Query: 83 LKNLIEEWCESN-NFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRM 141
L+ LI+ WC N ++ + + T C K EI L+ +S H E Q K ++++R
Sbjct: 72 LRRLIQSWCTLNASYGVERIPTPRPPIC----KSEIEKLIRDSASSH-ENQVKCLKRLRQ 126
Query: 142 LSKENPENRVLVAEHGGIPPLVQLLSYPDSK---IQEHAVTALLNLSIDE 188
+ EN N+ + E G+P + + DS+ + + A+ L +L E
Sbjct: 127 IVSENATNKRCL-EAAGVPEFLANIVSNDSENGSLTDEALNLLYHLETSE 175
>AT3G52450.1 | Symbols: PUB22 | plant U-box 22 |
chr3:19440943-19442250 REVERSE LENGTH=435
Length = 435
Score = 100 bits (248), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 78/129 (60%), Gaps = 7/129 (5%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKW-FESSHNTCPKTRQPLAHLQLAPNCA 82
IP FLCPI+L+IM DPVIV++G TY+RESIEKW F N+CP T+Q + L PN
Sbjct: 7 IPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLTPNHT 66
Query: 83 LKNLIEEWCESN-NFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRM 141
L+ LI+ WC N ++ + + T C K EI L++ SS HL Q K ++++R
Sbjct: 67 LRRLIQSWCTLNASYGIERIPTPKPPIC----KSEIEKLIKESSSSHL-NQVKCLKRLRQ 121
Query: 142 LSKENPENR 150
+ EN N+
Sbjct: 122 IVSENTTNK 130
>AT5G18320.1 | Symbols: | ARM repeat superfamily protein |
chr5:6064431-6066186 REVERSE LENGTH=458
Length = 458
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
+P EF+C ++ IM +PVI+ASGQTYE+ I +W + TCPKT+Q L+H PN +
Sbjct: 72 VPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK-HERTCPKTKQVLSHRLWIPNHLI 130
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRMLS 143
+LI +WC N + K + E + V S SS+ +Q +A +++R +
Sbjct: 131 SDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSV--ADQIEAAKELRHQT 188
Query: 144 KENPENRVLVAE--HGGIPPLVQLLSYPDSKI------QEHAVTALLNLSIDEGN 190
K+ P RV H I L+ LS D + QE+ VTAL NLSI E N
Sbjct: 189 KKFPNVRVFFVAGIHDSITRLLSPLSTLDEAVDSSLELQENIVTALFNLSILESN 243
>AT5G67340.1 | Symbols: | ARM repeat superfamily protein |
chr5:26864996-26867450 FORWARD LENGTH=707
Length = 707
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 6/103 (5%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
+P +F C ++LE+MTDPVIVASGQT+ER I+KW + CPKTRQ L+H L PN +
Sbjct: 240 VPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNFIV 299
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSS 126
+ + WCE+NN P I + E P LVES+ +
Sbjct: 300 RAFLASWCETNNVYPPDPLEL------IHSSEPFPLLVESVRA 336
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 98 LPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHG 157
+P S IE E+ L++ L S L+ QR+A +IR+L++ + +NR+++A
Sbjct: 406 IPATVRETGSSSSIET--EVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCE 463
Query: 158 GIPPLVQLLSYPDSKIQEHAVTALLNLSIDEGN 190
IP LV LL D +IQ AVT LLNLSI++ N
Sbjct: 464 AIPSLVSLLYSTDERIQADAVTCLLNLSINDNN 496
>AT1G66160.1 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=431
Length = 431
Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 15/145 (10%)
Query: 22 LVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNC 81
+ IP +F CPI+ E+M DPVI+ASG TY+RE+IEKWFES + TCP T L L+ PN
Sbjct: 31 ITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQIPNH 90
Query: 82 ALKNLIEEWCESNNFKLPKKYTAAQESCPI----ENKEEIPSLVESLSSIHLEEQRKA-- 135
++ +I+ WC S+ E P ++ + E LS+ A
Sbjct: 91 TIRRMIQGWCGSS-------LGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACM 143
Query: 136 --VEKIRMLSKENPENRVLVAEHGG 158
V K+ L KE+ NR V E+G
Sbjct: 144 EMVTKMTRLGKESERNRKCVKENGA 168
>AT1G20780.1 | Symbols: PUB44, ATPUB44, SAUL1 |
senescence-associated E3 ubiquitin ligase 1 |
chr1:7217812-7220609 FORWARD LENGTH=801
Length = 801
Score = 91.3 bits (225), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 99/199 (49%), Gaps = 36/199 (18%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHN-----TCPKTRQPLAHLQLA 78
I F+CP+T E+M DPV + +G+T+ERE+IEKWF+ + +CP T Q L ++
Sbjct: 23 IYEAFICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVS 82
Query: 79 PNCALKNLIEEWCESNNFKLPKKYTAAQESCPIENKEE---------------------- 116
+ AL+N IEEW N+ K A++S + N E
Sbjct: 83 ASIALRNTIEEWRSRND---AAKLDIARQSLFLGNAETDILQALMHVRQICRTIRSNRHG 139
Query: 117 ------IPSLVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPD 170
I +++ L S + KA++ ++++ + + E++ +VAE + LV+ LS+
Sbjct: 140 VRNSQLIHMIIDMLKSTSHRVRYKALQTLQVVVEGDDESKAIVAEGDTVRTLVKFLSHEP 199
Query: 171 SKIQEHAVTALLNLSIDEG 189
SK +E AV+ L LS E
Sbjct: 200 SKGREAAVSLLFELSKSEA 218
>AT3G54790.2 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284255 REVERSE LENGTH=724
Length = 724
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
IP F CP++ E+M DPVIVASGQT++R SI+KW ++ CP+TRQ L H +L PN +
Sbjct: 202 IPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTV 261
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSS 126
K +I W E+N L A SC + + S+ ++ S
Sbjct: 262 KAMIASWLEANRINL------ATNSCHQYDGGDASSMANNMGS 298
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 42/71 (59%)
Query: 120 LVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVT 179
LVE L S + + A +IR L+ + ENRV + G I PL+ LL + QEHAVT
Sbjct: 441 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 500
Query: 180 ALLNLSIDEGN 190
ALLNLSI E N
Sbjct: 501 ALLNLSISELN 511
>AT3G54790.1 | Symbols: | ARM repeat superfamily protein |
chr3:20281830-20284363 REVERSE LENGTH=760
Length = 760
Score = 90.9 bits (224), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 61/103 (59%), Gaps = 6/103 (5%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
IP F CP++ E+M DPVIVASGQT++R SI+KW ++ CP+TRQ L H +L PN +
Sbjct: 238 IPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTV 297
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSS 126
K +I W E+N L A SC + + S+ ++ S
Sbjct: 298 KAMIASWLEANRINL------ATNSCHQYDGGDASSMANNMGS 334
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 42/71 (59%)
Query: 120 LVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVT 179
LVE L S + + A +IR L+ + ENRV + G I PL+ LL + QEHAVT
Sbjct: 477 LVEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVT 536
Query: 180 ALLNLSIDEGN 190
ALLNLSI E N
Sbjct: 537 ALLNLSISELN 547
>AT1G76390.2 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 36/199 (18%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHN-----TCPKTRQPLAHLQLA 78
I F+CP+T ++M +PV + +GQT+ERE+IEKWF+ +CP T + L+ L+
Sbjct: 25 IYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLS 84
Query: 79 PNCALKNLIEEWCESNNFKLPKKYTAAQESCPIENKE-----------EI---------- 117
P+ AL+N IEEW N+ K A++S + N E EI
Sbjct: 85 PSIALRNTIEEWRARND---ALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQR 141
Query: 118 ---PSLV----ESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPD 170
P LV + L S E + KA++ ++++ + + E++ +VAE + +V+ LS
Sbjct: 142 VCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEP 201
Query: 171 SKIQEHAVTALLNLSIDEG 189
SK +E AV+ L LS E
Sbjct: 202 SKGREAAVSVLFELSKSEA 220
>AT1G76390.1 | Symbols: | ARM repeat superfamily protein |
chr1:28655914-28658531 FORWARD LENGTH=811
Length = 811
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 36/199 (18%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHN-----TCPKTRQPLAHLQLA 78
I F+CP+T ++M +PV + +GQT+ERE+IEKWF+ +CP T + L+ L+
Sbjct: 25 IYEAFICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLS 84
Query: 79 PNCALKNLIEEWCESNNFKLPKKYTAAQESCPIENKE-----------EI---------- 117
P+ AL+N IEEW N+ K A++S + N E EI
Sbjct: 85 PSIALRNTIEEWRARND---ALKLDIARQSLYLGNAETNILLALKNVREICRNIRKIRQR 141
Query: 118 ---PSLV----ESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPD 170
P LV + L S E + KA++ ++++ + + E++ +VAE + +V+ LS
Sbjct: 142 VCNPQLVRLITDMLKSSSHEVRCKALQTLQVVVEGDEESKAIVAEGDTVRTIVKFLSQEP 201
Query: 171 SKIQEHAVTALLNLSIDEG 189
SK +E AV+ L LS E
Sbjct: 202 SKGREAAVSVLFELSKSEA 220
>AT5G65920.1 | Symbols: | ARM repeat superfamily protein |
chr5:26364323-26365657 REVERSE LENGTH=444
Length = 444
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 83/165 (50%), Gaps = 9/165 (5%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
IP F+CPI+LE M DPV + +GQTYER +I KWF H TCP T Q L + PN L
Sbjct: 60 IPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKTL 119
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRMLS 143
LI W S + L KK + + IE ++ +L + + A+ +++ +
Sbjct: 120 HQLIYTWF-SQKYVLMKKRSEDVQGRAIE-------ILGTLRKAKGKAKVHALSELKQVV 171
Query: 144 KENPENRVLVAEHGGIPPLVQLLS-YPDSKIQEHAVTALLNLSID 187
+ + V + GG+ + LLS + + A+ L+NL +D
Sbjct: 172 MAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELD 216
>AT3G49810.1 | Symbols: | ARM repeat superfamily protein |
chr3:18474936-18476282 REVERSE LENGTH=448
Length = 448
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
IP F+CPI+LE M DPV + +GQTYER +I KWF H TCP T Q L + PN L
Sbjct: 64 IPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDDTVTPNKTL 123
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRMLS 143
+LI W S + L KK + + IE ++ +L + + A+ +++ +
Sbjct: 124 HHLIYTWF-SQKYVLMKKRSEDVQGRAIE-------ILGTLKKAKGQARVHALSELKQIV 175
Query: 144 KENPENRVLVAEHGGIPPLVQLLS-YPDSKIQEHAVTALLNLSID 187
+ R V E GG+ + LL + + V L++L +D
Sbjct: 176 IAHLMARKTVVEEGGVSVISSLLGPFTSHAVGSEVVAILVSLDLD 220
>AT5G64660.1 | Symbols: ATCMPG2, CMPG2 | CYS, MET, PRO, and GLY
protein 2 | chr5:25842119-25843381 REVERSE LENGTH=420
Length = 420
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 84/152 (55%), Gaps = 8/152 (5%)
Query: 22 LVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNC 81
+ +P F CPI+L++M PV + +G TY+R SI++W + +NTCP T Q L + PN
Sbjct: 8 ITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFIPNR 67
Query: 82 ALKNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQ--RKAVEKI 139
L+ LIE W S++ + +A+ + P ++EI ++ + I EE+ R+ + KI
Sbjct: 68 TLQRLIEIW--SDSVRRRTCVESAELAAP--TRDEIADAIDRV-KIEKEERDDREVLSKI 122
Query: 140 RMLSKENPENR-VLVAEHGGIPPLVQLLSYPD 170
+E+ +NR L + + LV L++ D
Sbjct: 123 VRFGRESDDNRGFLAGKDDFVKLLVDLINQVD 154
>AT5G09800.1 | Symbols: | ARM repeat superfamily protein |
chr5:3043123-3044352 REVERSE LENGTH=409
Length = 409
Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 81/155 (52%), Gaps = 14/155 (9%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
+P F CPI+L++M PV +++G TY+R SI++W + +NTCP T Q L + + PN L
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTL 70
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRMLS 143
LI+ W +S N ++ + ++EI + +E + A KI +
Sbjct: 71 HRLIDHWSDSIN----RRADSESPESDTPTRDEINAAIE-----RFRIENDARSKILRFA 121
Query: 144 KENPENR-VLVAEHGGIPPLVQLLS----YPDSKI 173
+E+ ENR L + + LV L+S + DS++
Sbjct: 122 RESDENREFLAGKDDFVAMLVDLISDSRNFSDSQL 156
>AT3G18710.1 | Symbols: PUB29, ATPUB29 | plant U-box 29 |
chr3:6434234-6435481 REVERSE LENGTH=415
Length = 415
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/167 (32%), Positives = 83/167 (49%), Gaps = 16/167 (9%)
Query: 16 LGRS---TSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPL 72
+GR T + +P F CPI+L++M PV + +G TY+R SI++W + +NTCP T Q L
Sbjct: 1 MGRDETETYITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLL 60
Query: 73 AHLQLAPNCALKNLIEEWCES----NNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIH 128
PN L+ LI W +S +N P + P KEE+ L+E L S+
Sbjct: 61 KTKDFVPNLTLQRLINIWSDSIGRRHNGDSPVLNPPSGREVP--TKEEVNVLLERLMSLE 118
Query: 129 LEEQRKAVEKIRMLSKENPENR-VLVAEHGGIPPLVQLLSYPDSKIQ 174
+ KI K++ NR L + +P LV ++ +KI+
Sbjct: 119 ------NLMKIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIE 159
>AT4G36550.1 | Symbols: | ARM repeat superfamily protein |
chr4:17245400-17247926 REVERSE LENGTH=718
Length = 718
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 23 VIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCA 82
+P +F C ++ +M DPVI++SG T+ER I+KWF+ +++CP +++ L L PN
Sbjct: 218 TLPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVE 277
Query: 83 LKNLIEEWCESNNFKL---PKKYTAAQESCPIENKEEIPSLVESLSSI 127
LK+ I EWC N + +K+ A S I+ I S SL +I
Sbjct: 278 LKSQISEWCAKNGLDVQDPARKHVKASNS--IDFSVSIASFGSSLYNI 323
>AT4G21350.1 | Symbols: B80, PUB8 | plant U-box 8 |
chr4:11356143-11357267 REVERSE LENGTH=374
Length = 374
Score = 80.5 bits (197), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHL-QLAPNCA 82
+P++F CPI+LEIM+DPVI+ SG T++R SI++W +S + TCP T+ PL+ L PN A
Sbjct: 5 LPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHA 64
Query: 83 LKNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRML 142
L++LI + + K + QE +++ I +LV SS + +++ ++ L
Sbjct: 65 LRSLILNFAHV-SLKESSRPRTQQEHSHSQSQALISTLVSQSSSN--ASKLESLTRLVRL 121
Query: 143 SKENPENRVLVAEHGGIPPLVQLLSYPDSKIQE 175
+K + R V E G + + + + +QE
Sbjct: 122 TKRDSSIRRKVTESGAVRAALDCVDSCNQVLQE 154
>AT5G37490.1 | Symbols: | ARM repeat superfamily protein |
chr5:14887744-14889051 FORWARD LENGTH=435
Length = 435
Score = 80.1 bits (196), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 1/136 (0%)
Query: 22 LVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNC 81
+ IP EF CPI++++M DPVI+++G TY+R SIE W S + TCP T L PN
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 82 ALKNLIEEWCESNNFKLPKKY-TAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIR 140
++ +I+ WC L ++ T P E E L + E+ +EKI+
Sbjct: 89 TIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIK 148
Query: 141 MLSKENPENRVLVAEH 156
L E+ +NR V E+
Sbjct: 149 KLGDESEKNRKCVNEN 164
>AT2G45920.1 | Symbols: | U-box domain-containing protein |
chr2:18899363-18901097 FORWARD LENGTH=400
Length = 400
Score = 79.3 bits (194), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F+CPI+LE+M DP + A G TYE E+I W + H T P T L H +L PN AL+
Sbjct: 326 PQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALR 385
Query: 85 NLIEEWCE-SNNFK 97
+ I+EW S++F+
Sbjct: 386 SAIQEWLHASSSFR 399
>AT5G18340.1 | Symbols: | ARM repeat superfamily protein |
chr5:6070640-6072198 REVERSE LENGTH=456
Length = 456
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 95/183 (51%), Gaps = 13/183 (7%)
Query: 19 STSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHN-TCPKTRQPLAHLQL 77
S+S+ +P EF C ++ IM DPVI+ SGQTYE+ I +W +H+ TCP +Q L + L
Sbjct: 69 SSSVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL--NHDLTCPTAKQVLYRVCL 126
Query: 78 APNCALKNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLS--SIHLEEQRKA 135
PN + LI WC +N + P + + + I SL++ +S S + +Q +A
Sbjct: 127 TPNHLINELITRWCLANKYDRPAPKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEA 186
Query: 136 VEKIRMLSKENPENRVLVAEH------GGIPPLVQLLSYPDS--KIQEHAVTALLNLSID 187
+++ + +++ R + + PL L DS ++QE+ VTAL N+S
Sbjct: 187 AKELALQTEKFVNVRDFFIKELPDSITRLLTPLSVLGDEVDSNPELQENIVTALFNMSTF 246
Query: 188 EGN 190
E N
Sbjct: 247 EKN 249
>AT3G11840.1 | Symbols: PUB24 | plant U-box 24 |
chr3:3736578-3738250 REVERSE LENGTH=470
Length = 470
Score = 78.2 bits (191), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 11 VMPKMLGRSTSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQ 70
V P+M + IP+ F+CPI+LEIM DPV SG TY+R++I KW E +CP T+Q
Sbjct: 11 VFPQMDQEEEEIEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKVP-SCPVTKQ 69
Query: 71 PL-AHLQLAPNCALKNLIEEWCESN 94
PL L PN L+ LI+ WC N
Sbjct: 70 PLPLDSDLTPNHMLRRLIQHWCVEN 94
>AT3G61390.2 | Symbols: | RING/U-box superfamily protein |
chr3:22716418-22718270 FORWARD LENGTH=435
Length = 435
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F+CPIT +IM DP + A G TYE E+I +WFE H T P + L H L PN AL+
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 85 NLIEEW 90
+ I+EW
Sbjct: 414 SAIQEW 419
>AT5G18330.1 | Symbols: | ARM repeat superfamily protein |
chr5:6068474-6070042 REVERSE LENGTH=445
Length = 445
Score = 77.8 bits (190), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 95/175 (54%), Gaps = 15/175 (8%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
+P EF+C ++ +IM +P+++ASGQT+E+ I +W + TCP+T+Q L H + PN +
Sbjct: 65 VPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKHER-TCPRTKQVLYHRFMIPNHLI 123
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSS-IHLEEQRKAVEKIRML 142
+I+EWC +NF PK + E + ++ SL++ +SS +E+Q +A +++ +
Sbjct: 124 NEVIKEWCLIHNFDRPK---TSDEVIDLFTG-DLESLLQRISSPSSVEDQTEAAKELALK 179
Query: 143 SKENPENRVLVAEHGGIPPLVQLLSYPDS-------KIQEHAVTALLNLSIDEGN 190
+K + V V IP + L P S + E+ VTAL S E N
Sbjct: 180 AKRF--SSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTSEKN 232
>AT2G45910.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:18894520-18898212 FORWARD
LENGTH=834
Length = 834
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%)
Query: 16 LGRSTSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHL 75
LGR+ + P F+CPI E+M DP + A G TYE E+I W +S H+T P T L+H
Sbjct: 755 LGRNEHRIAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHT 814
Query: 76 QLAPNCALKNLIEEWCE 92
L N AL++ I+EW +
Sbjct: 815 SLIANHALRSAIQEWLQ 831
>AT1G56040.1 | Symbols: | HEAT/U-box domain-containing protein |
chr1:20960356-20962334 REVERSE LENGTH=485
Length = 485
Score = 76.6 bits (187), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 40/65 (61%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F CPIT E+M DP A G TYE ESI KW + H T P T L+HL L PN AL+
Sbjct: 419 PSSFFCPITQEVMKDPHFAADGFTYEAESIRKWLSTGHQTSPMTNLRLSHLTLVPNRALR 478
Query: 85 NLIEE 89
+ IEE
Sbjct: 479 SAIEE 483
>AT1G01660.1 | Symbols: | RING/U-box superfamily protein |
chr1:240057-242608 REVERSE LENGTH=568
Length = 568
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F+CPI+ E+M +P + A G TYE ES+ +W ++ H T P T LAH L PN AL+
Sbjct: 498 PSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHALR 557
Query: 85 NLIEEWCESNN 95
+ I+EW + N+
Sbjct: 558 SAIQEWLQRNS 568
>AT1G01680.1 | Symbols: ATPUB54, PUB54 | plant U-box 54 |
chr1:246411-248329 REVERSE LENGTH=308
Length = 308
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 27 EFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALKNL 86
+F CPI++EIM DP + A G TYE E KW S T PKT +PL + L PN L+ +
Sbjct: 236 DFKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRII 295
Query: 87 IEEWCESN-NFK 97
I++W E N N+K
Sbjct: 296 IKDWLEKNPNYK 307
>AT5G58680.1 | Symbols: | ARM repeat superfamily protein |
chr5:23708247-23709320 REVERSE LENGTH=357
Length = 357
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 61/85 (71%), Gaps = 2/85 (2%)
Query: 108 SCPIENKEE-IPSLVESL-SSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQL 165
SC ++N ++ I +L+ L SS +EEQ++A +IR+LSK PENR+ +A+ G I PLV L
Sbjct: 52 SCAVDNSDDVIRNLITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSL 111
Query: 166 LSYPDSKIQEHAVTALLNLSIDEGN 190
+S D ++QE+ VTA+LNLS+ + N
Sbjct: 112 ISSSDLQLQEYGVTAVLNLSLCDEN 136
>AT3G01400.1 | Symbols: | ARM repeat superfamily protein |
chr3:151920-152987 FORWARD LENGTH=355
Length = 355
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Query: 108 SCPIENKEE-IPSLVESL-SSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQL 165
SC EN ++ I LV L SS ++EQ++A +IR+LSK PENR+ +A+ G I PL+ L
Sbjct: 54 SCASENSDDLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISL 113
Query: 166 LSYPDSKIQEHAVTALLNLSI 186
+S D ++QE+ VTA+LNLS+
Sbjct: 114 ISSSDLQLQEYGVTAILNLSL 134
>AT2G19410.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr2:8404901-8409012 REVERSE LENGTH=801
Length = 801
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Query: 19 STSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLA 78
++L P + CPI EIM +P I A G TYER++I W E HN P TRQ L H +L
Sbjct: 720 GSNLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLE-KHNISPVTRQKLDHFKLT 778
Query: 79 PNCALKNLIEEWCESNNF 96
PN L++ I +W F
Sbjct: 779 PNHTLRSAIRDWKSRVRF 796
>AT5G57035.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:23080743-23083819 FORWARD
LENGTH=789
Length = 789
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P + CPI EIM DP I A G TYER++I++W + + P T+ L H L PN L+
Sbjct: 709 PTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPNHTLR 768
Query: 85 NLIEEWCESNNFKL 98
+ I EW + L
Sbjct: 769 SAIREWRSRSRLDL 782
>AT5G65500.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:26181093-26183997 REVERSE
LENGTH=791
Length = 791
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
IP F+CPI E+M +P + A G +YE E+I++W H+T P T L + L PN L
Sbjct: 715 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTL 774
Query: 84 KNLIEEW 90
++LI++W
Sbjct: 775 RSLIQDW 781
>AT3G49060.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187386-18191878 REVERSE
LENGTH=805
Length = 805
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P +LCPI E+M DP+I A G TYE E+I +W + H+T P T + L PN AL
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 85 NLIEEW 90
I++W
Sbjct: 796 LAIQDW 801
>AT3G49060.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr3:18187054-18191878 REVERSE
LENGTH=795
Length = 795
Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 39/66 (59%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P +LCPI E+M DP+I A G TYE E+I +W + H+T P T + L PN AL
Sbjct: 726 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 785
Query: 85 NLIEEW 90
I++W
Sbjct: 786 LAIQDW 791
>AT5G51270.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:20835137-20838262 REVERSE
LENGTH=819
Length = 819
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F CP+ ++M +P I A G TY+R +IE+W E +H T P T PL ++ L PN L
Sbjct: 750 PSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHTLY 808
Query: 85 NLIEEWCESN 94
I EW N
Sbjct: 809 AAIVEWRNRN 818
>AT1G68940.3 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1061
Length = 1061
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 22/167 (13%)
Query: 28 FLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNT----CPKTRQPLAHLQLAPNCAL 83
F+CP+T EIM DPV +G T ER+++ +WF+S N+ CP T Q L +L+ N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLT-TELSANVVL 308
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRMLS 143
K +I+EW N E+ I+ SL S S + A+ ++M
Sbjct: 309 KTIIQEWKVRN------------EAARIKVAHAALSLGGSESMV-----IDALRDLQMTC 351
Query: 144 KENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSIDEGN 190
+ N+V V E G I L + L+Y ++ + L L+ +E +
Sbjct: 352 EGKEYNKVQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEETD 398
>AT1G68940.1 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25922001-25925374 REVERSE LENGTH=1033
Length = 1033
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 22/167 (13%)
Query: 28 FLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNT----CPKTRQPLAHLQLAPNCAL 83
F+CP+T EIM DPV +G T ER+++ +WF+S N+ CP T Q L +L+ N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLT-TELSANVVL 308
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRMLS 143
K +I+EW N E+ I+ SL S S + A+ ++M
Sbjct: 309 KTIIQEWKVRN------------EAARIKVAHAALSLGGSESMV-----IDALRDLQMTC 351
Query: 144 KENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSIDEGN 190
+ N+V V E G I L + L+Y ++ + L L+ +E +
Sbjct: 352 EGKEYNKVQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEETD 398
>AT1G68940.2 | Symbols: | Armadillo/beta-catenin-like repeat family
protein | chr1:25921453-25925374 REVERSE LENGTH=1035
Length = 1035
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 22/167 (13%)
Query: 28 FLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNT----CPKTRQPLAHLQLAPNCAL 83
F+CP+T EIM DPV +G T ER+++ +WF+S N+ CP T Q L +L+ N L
Sbjct: 250 FICPLTKEIMEDPVTTETGVTCERQAVIEWFDSFGNSDEINCPVTGQKLT-TELSANVVL 308
Query: 84 KNLIEEWCESNNFKLPKKYTAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRMLS 143
K +I+EW N E+ I+ SL S S + A+ ++M
Sbjct: 309 KTIIQEWKVRN------------EAARIKVAHAALSLGGSESMV-----IDALRDLQMTC 351
Query: 144 KENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSIDEGN 190
+ N+V V E G I L + L+Y ++ + L L+ +E +
Sbjct: 352 EGKEYNKVQVREAGIIQLLDRYLTYRSKDVRFELLKFLRTLADEETD 398
>AT4G25160.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr4:12903360-12906669 REVERSE
LENGTH=835
Length = 835
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F+CP+ ++M +P + A G TY+R +IE+W + HNT P T PL L PN L
Sbjct: 767 PTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLK-EHNTSPMTDSPLHSKNLLPNYTLY 825
Query: 85 NLIEEW 90
I EW
Sbjct: 826 TAIMEW 831
>AT3G47820.1 | Symbols: PUB39 | PLANT U-BOX 39 |
chr3:17644434-17645963 FORWARD LENGTH=509
Length = 509
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 8/80 (10%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPK----TRQPLAHLQLAPN 80
P EFLCPIT +M+DPV+VASGQT+ER S++ S PK T+ L+ + PN
Sbjct: 11 PTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSF--APKLHDGTQPDLS--TVIPN 66
Query: 81 CALKNLIEEWCESNNFKLPK 100
A+K+ I WC+ N + P+
Sbjct: 67 LAMKSTILSWCDRNKMEHPR 86
>AT4G16490.1 | Symbols: | ARM repeat superfamily protein |
chr4:9293891-9295530 REVERSE LENGTH=472
Length = 472
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%)
Query: 121 VESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTA 180
++ L S + +R A K+R+L+K +NRVL+ E G I L+ LL D QEHAVTA
Sbjct: 189 IDGLRSSSVAIKRSAAAKLRLLAKNRADNRVLIGESGAIQALIPLLRCNDPWTQEHAVTA 248
Query: 181 LLNLSIDEGN 190
LLNLS+ + N
Sbjct: 249 LLNLSLHDQN 258
>AT5G40140.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:16057347-16058999 FORWARD
LENGTH=550
Length = 550
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
IP EFLCPI+ +M DP+IV+SG +YER + P P + PN AL
Sbjct: 58 IPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPTP----PPDFSTVIPNLAL 113
Query: 84 KNLIEEWCESNNFKLPKKYTAA 105
K+ I WCE F PK +A
Sbjct: 114 KSAIHSWCERRCFPPPKPLNSA 135
>AT1G66160.2 | Symbols: ATCMPG1, CMPG1 | CYS, MET, PRO, and GLY
protein 1 | chr1:24637218-24638513 FORWARD LENGTH=415
Length = 415
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 60/145 (41%), Gaps = 31/145 (21%)
Query: 22 LVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNC 81
+ IP +F CPI+ E+M DP WFES + TCP T L L+ PN
Sbjct: 31 ITIPSQFQCPISYELMKDP----------------WFESGYQTCPVTNTVLTSLEQIPNH 74
Query: 82 ALKNLIEEWCESNNFKLPKKYTAAQESCPI----ENKEEIPSLVESLSSIHLEEQRKA-- 135
++ +I+ WC S+ E P ++ + E LS+ A
Sbjct: 75 TIRRMIQGWCGSS-------LGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACM 127
Query: 136 --VEKIRMLSKENPENRVLVAEHGG 158
V K+ L KE+ NR V E+G
Sbjct: 128 EMVTKMTRLGKESERNRKCVKENGA 152
>AT5G61550.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751805 FORWARD
LENGTH=860
Length = 860
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F+CP+ +M +P + A G TY+RE+IE+W +T P T PL + L N L
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQK-DTSPVTNLPLPNKNLIANYTLY 834
Query: 85 NLIEEWCESNNFKLPK 100
+ I EW + PK
Sbjct: 835 SAIMEWKSNKRLNFPK 850
>AT5G62560.1 | Symbols: | RING/U-box superfamily protein with ARM
repeat domain | chr5:25110073-25111752 FORWARD
LENGTH=559
Length = 559
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSH--NTCPKTRQPLAHLQLAPNCA 82
P EFLCPIT +M+DPV+V+SGQT+ER S++ + + TR L+ + PN A
Sbjct: 32 PPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLS--TVIPNLA 89
Query: 83 LKNLIEEWCESNNFKLPKKYTAA 105
+K+ I WC+ P+ AA
Sbjct: 90 MKSTIFSWCDRQKVDHPRPPDAA 112
>AT5G61560.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=796
Length = 796
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F CPIT ++M +P + + G TYE+ +I++W + +H + P T P L PN +L
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSDSLLPNHSLL 784
Query: 85 NLIEEW 90
+ I+EW
Sbjct: 785 SAIKEW 790
>AT5G61560.2 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24753476-24756506 FORWARD
LENGTH=794
Length = 794
Score = 58.2 bits (139), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F CPIT ++M +P + + G TYE+ +I++W + +H + P T P L PN +L
Sbjct: 724 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQKNHKS-PMTDLPFPSDSLLPNHSLL 782
Query: 85 NLIEEW 90
+ I+EW
Sbjct: 783 SAIKEW 788
>AT3G07360.3 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 86 LIEEWCESNNFKLPKKY----TAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRM 141
+I +WC+ N + +Y E+ ++E SL+ +SS +L++Q+ A +++R+
Sbjct: 1 MISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELRL 60
Query: 142 LSKENPENRVLVAEH-GGIPPLVQLL---SYPDSKIQEHAVTALLNLSI-DEGN 190
L+++ E R L E I LV L S PD K+QE VT LLN+SI D+ N
Sbjct: 61 LTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSN 114
>AT3G07360.2 | Symbols: PUB9, ATPUB9 | plant U-box 9 |
chr3:2355636-2356613 FORWARD LENGTH=325
Length = 325
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 9/114 (7%)
Query: 86 LIEEWCESNNFKLPKKY----TAAQESCPIENKEEIPSLVESLSSIHLEEQRKAVEKIRM 141
+I +WC+ N + +Y E+ ++E SL+ +SS +L++Q+ A +++R+
Sbjct: 1 MISKWCKKNGLETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELRL 60
Query: 142 LSKENPENRVLVAEH-GGIPPLVQLL---SYPDSKIQEHAVTALLNLSI-DEGN 190
L+++ E R L E I LV L S PD K+QE VT LLN+SI D+ N
Sbjct: 61 LTRKGTEFRALFGESPDEITRLVNPLLHGSNPDEKLQEDVVTTLLNISIHDDSN 114
>AT5G61550.1 | Symbols: | U-box domain-containing protein kinase
family protein | chr5:24748325-24751558 FORWARD
LENGTH=845
Length = 845
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALK 84
P F+CP+ +M +P + A G TY+RE+IE+W +T P T PL + L N L
Sbjct: 776 PSHFICPLLKGVMNEPCVAADGYTYDREAIEEWLRQK-DTSPVTNLPLPNKNLIANYTLY 834
Query: 85 NLIEEW 90
+ I EW
Sbjct: 835 SAIMEW 840
>AT1G56030.1 | Symbols: | RING/U-box superfamily protein |
chr1:20957098-20958550 REVERSE LENGTH=371
Length = 371
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 35 EIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCALKNLIEE 89
++M +P + A G TYE E+I+KW + H T P T L+H PN AL++ IEE
Sbjct: 314 DVMKNPHMAADGFTYELEAIQKWINTGHRTSPMTNLKLSHFSFFPNRALRSAIEE 368
>AT1G01670.1 | Symbols: | RING/U-box superfamily protein |
chr1:242943-245163 REVERSE LENGTH=365
Length = 365
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 19 STSLVIPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLA 78
S S+ P F+CPI+ +IM +P + A G TYE + +W P T L + L
Sbjct: 289 SVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLENRNLI 348
Query: 79 PNCALKNLIEEWCESN 94
PN L++ I++W + +
Sbjct: 349 PNLVLRSAIKDWLQQH 364
>AT5G65200.1 | Symbols: PUB38, ATPUB38 | plant U-box 38 |
chr5:26048173-26049843 REVERSE LENGTH=556
Length = 556
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 25 PHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHL----QLAPN 80
P EFLCPI+ +M+DPV+V+SGQT+ER ++ + N PK L + PN
Sbjct: 34 PVEFLCPISKSVMSDPVVVSSGQTFERVCVQVCRD--LNFIPKLNDDEESLPDFSNIIPN 91
Query: 81 CALKNLIEEWCESNNFKLPK 100
+K+ I+ WC++ P+
Sbjct: 92 LNMKSTIDTWCDTVGVSRPQ 111
>AT1G08315.1 | Symbols: | ARM repeat superfamily protein |
chr1:2620500-2621477 REVERSE LENGTH=325
Length = 325
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 47/73 (64%)
Query: 114 KEEIPSLVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKI 173
+ + ++V LSS+ + + A+ ++R++SK++P++R+++A+ G IP L + L
Sbjct: 6 RRTMSTIVSRLSSVSEQTRAAALAELRLISKQDPDSRLIIADAGAIPYLAETLYSSSHSS 65
Query: 174 QEHAVTALLNLSI 186
QE+A LLNLSI
Sbjct: 66 QENAAATLLNLSI 78
>AT1G15165.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:5217719-5220067 REVERSE LENGTH=329
Length = 329
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/27 (74%), Positives = 24/27 (88%)
Query: 32 ITLEIMTDPVIVASGQTYERESIEKWF 58
I+L++M DPVIVASGQTYER +EKWF
Sbjct: 256 ISLQLMRDPVIVASGQTYERVCVEKWF 282
>AT5G19330.1 | Symbols: ARIA | ARM repeat protein interacting with
ABF2 | chr5:6508095-6512701 REVERSE LENGTH=710
Length = 710
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 133 RKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSI 186
R+A + I L+ EN + V GGIPPLV+LL + DSK+Q A AL L+
Sbjct: 174 RRAADAITNLAHENSSIKTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLAF 227
>AT3G07370.1 | Symbols: ATCHIP, CHIP | carboxyl terminus of
HSC70-interacting protein | chr3:2358323-2360301 REVERSE
LENGTH=278
Length = 278
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 37/71 (52%)
Query: 24 IPHEFLCPITLEIMTDPVIVASGQTYERESIEKWFESSHNTCPKTRQPLAHLQLAPNCAL 83
+P C ITLEI DPVI SG TYER +I + + P TR+ + L PN A+
Sbjct: 200 VPDYLCCNITLEIFRDPVISPSGVTYERAAILEHLKKVGKFDPITREKIDPANLVPNLAI 259
Query: 84 KNLIEEWCESN 94
K + + E +
Sbjct: 260 KEAVAAYLEKH 270
>AT5G19330.2 | Symbols: ARIA | ARM repeat protein interacting with
ABF2 | chr5:6508300-6512701 REVERSE LENGTH=636
Length = 636
Score = 47.4 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 133 RKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLS 185
R+A + I L+ EN + V GGIPPLV+LL + DSK+Q A AL L+
Sbjct: 175 RRAADAITNLAHENSSIKTRVRVEGGIPPLVELLEFSDSKVQRAAAGALRTLA 227