Miyakogusa Predicted Gene

Lj1g3v1911720.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T2U9_LOTJA 405 94.2 94.2 (tr|I3T2U9) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G11190.1 207 55.3 70.5 | Symbols: SHN3 | Integrase-type DNA-binding superfamily protein | chr5:3564976-3566051 FORWARD LENGTH=189
Medicago Medtr3g107380.1 258 69.1 74.5 | ethylene response factor | HC | chr3:49532324-49533111 | 20130731
Soybean Glyma06g07240.2 280 76.5 80.7  
LJGI gnl|LJGI|TC79408 1217 99.5 99.5 similar to UniRef100_Q3E958 Cluster: Ethylene-responsive transcription factor SHINE 3; n=1; Arabidopsis thaliana|Rep: Ethylene-responsive transcription factor SHINE 3 - Arabidopsis thaliana (Mouse-ear cress), partial (65%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1911720.1 length: 208 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 3.3e-10 7-18
29-45
Gene3D G3DSA:3.30.730.10 no description 1.4e-31 6-65
HMMPfam PF00847 AP2 2.4e-15 5-55
HMMSmart SM00380 DNA-binding 7.9e-40 6-69
ProfileScan PS51032 AP2_ERF 22.036 6-63
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 1.3e-21 5-66
no_ID  
HMMPanther PTHR31194 SHN 1e-91 1-200
HMMPanther PTHR31194:SF0 SHN 1e-91 1-200
Seg seg seg NA 39-50
Wolf-PSORT
Lj1g3v1911720.1	nucl 10, chlo 2, plas 1, cysk 1, chlo_mito 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1911720.1