Miyakogusa Predicted Gene
- Lj1g3v1911720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v1911720.1 Non Chatacterized Hit- tr|Q5SMI3|Q5SMI3_ORYSJ
Putative ethylene response factor 1 OS=Oryza sativa
su,71.67,3e-19,seg,NULL; DNA-binding domain,DNA-binding,
integrase-type; AP2_ERF,AP2/ERF domain; SHN (SHINE), DNA
B,CUFF.28106.1
(630 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79408 similar to UniRef100_Q3E958 Cluster: Ethylene-r... 1217 0.0
>gnl|LJGI|TC79408 similar to UniRef100_Q3E958 Cluster: Ethylene-responsive
transcription factor SHINE 3; n=1; Arabidopsis
thaliana|Rep: Ethylene-responsive transcription factor
SHINE 3 - Arabidopsis thaliana (Mouse-ear cress),
partial (65%)
Length = 943
Score = 1217 bits (614), Expect = 0.0
Identities = 627/630 (99%), Gaps = 1/630 (0%)
Strand = Plus / Plus
Query: 1 atggtacaagccaaaaagttcagaggagttaggcagcgccagtggggctcctgggtgtca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atggtacaagccaaaaagttcagaggagttaggcagcgccagtggggctcctgggtgtca 199
Query: 61 gagattcgccacccattactgaagagaagggtgtggctaggaacatttgagacagcagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 gagattcgccacccattactgaagagaagggtgtggctaggaacatttgagacagcagag 259
Query: 121 gcagcagcaagggcatatgaccaagcagcaattttgatgaatggacagaatgccaagacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gcagcagcaagggcatatgaccaagcagcaattttgatgaatggacagaatgccaagacc 319
Query: 181 aatttccccaattcaaggaaccaagctggagatgctgcaacctcgaattgtgatgatgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 aatttccccaattcaaggaaccaagctggagatgctgcaacctcgaattgtgatgatgac 379
Query: 241 tctttcttatctcccaaggcactttcagagcttctcagcacaaagctcagaaaatactgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tctttcttatctcccaaggcactttcagagcttctcagcacaaagctcagaaaatactgc 439
Query: 301 aaagacccatctccatctgtcacatgtctgaggctagatgctgataattcccacattgga 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 440 aaagacccatctccatctgtcacatgtttgaggctagatgctgataattcccacattgga 499
Query: 361 gtgtggcagaaaggagcagggcctcattctaactctaattgggttatgagggtggagctt 420
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 500 gtgtggca-aaaggagcagggcctcattctaactctaattgggttatgagggcggagctt 558
Query: 421 gggaagaaacagaatgagggacattcagtttccacaggttcaccacaacatgtttgtagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gggaagaaacagaatgagggacattcagtttccacaggttcaccacaacatgtttgtagt 618
Query: 481 aatgctgcaaagagggtggaagaagaggacagagttgctttacagatgattgaggagctg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aatgctgcaaagagggtggaagaagaggacagagttgctttacagatgattgaggagctg 678
Query: 541 cttaattggaactatccttgtgcttcttcaacttcaagtaactcccagcaggaagaaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 cttaattggaactatccttgtgcttcttcaacttcaagtaactcccagcaggaagaaaaa 738
Query: 601 ttgaatcttccatgtcatgatggatgattc 630
||||||||||||||||||||||||||||||
Sbjct: 739 ttgaatcttccatgtcatgatggatgattc 768