Miyakogusa Predicted Gene
- Lj1g3v1582540.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr1
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7KU54_SOYBN |
223 |
89.0 |
95.8 |
(tr|K7KU54) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G24580.1 |
178 |
69.5 |
83.1 |
| Symbols: REN1 | Rho GTPase activation protein (RhoGAP) with PH domain | chr4:12687879-12694248 REVERSE LENGTH=933 |
| Medicago |
Medtr3g100580.1 |
211 |
83.9 |
92.4 |
| GTPase-activator protein for Rho-like GTPase family protein, putative | HC | chr3:46266743-46256804 | 20130731 |
| Soybean |
Glyma04g09780.1 |
223 |
89.7 |
96.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj1g3v1582540.1 |
length: 118 aa. |
| IPR000198 |
Rho GTPase-activating protein domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Biological Process |
GO:0007165 |
signal transduction |
|
|
| Gene3D |
G3DSA:1.10.555.10 |
no description |
3.3e-13 |
26-118 |
| HMMPfam |
PF00620 |
RhoGAP |
4.9e-09 |
48-115 |
| ProfileScan |
PS50238 |
RHOGAP |
15.524 |
39-118 |
| IPR008936 |
Rho GTPase activation protein |
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Biological Process |
GO:0007165 |
signal transduction |
|
|
| superfamily |
SSF48350 |
GTPase |
4e-12 |
34-118 |
| no_ID |
|
| HMMPanther |
PTHR23176 |
RHO/RAC/CDC |
6.1e-20 |
25-118 |
- Wolf-PSORT
Lj1g3v1582540.1 cyto 8, chlo 2, pero 2, nucl 1, E.R. 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj1g3v1582540.1 |
|