Miyakogusa Predicted Gene

Lj1g3v1060470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J897_MEDTR 1386 70.6 81.2 (tr|G7J897) Kinase-like protein OS=Medicago truncatula GN=MTR_3g092390 PE=4 SV=1
TAIR_pep AT3G47570.1 674 39.4 55.2 | Symbols: | Leucine-rich repeat protein kinase family protein | chr3:17527611-17530748 FORWARD LENGTH=1010
Medicago Medtr3g092390.1 1386 70.6 81.2 | LRR receptor-like kinase family protein | HC | chr3:42212679-42208987 | 20130731
Soybean Glyma04g40870.1 1364 69.3 79.6  
LJGI gnl|LJGI|TC81640 1160 100.0 100.0 weakly similar to UniRef100_A7QMX1 Cluster: Chromosome undetermined scaffold_129, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_129, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v1060470.1 length: 1004 aa.
IPR000719 Protein kinase, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
ProfileScan PS50011 PROTEIN_KINASE_DOM 35.241 679-998
IPR001245 Serine-threonine/tyrosine-protein kinase catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMPfam PF07714 Pkinase_Tyr 8.8e-42 682-909
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.11 94-115
141-163
ProfileScan PS51450 LRR 5.371 74-95
141-163
189-211
238-259
262-284
285-306
315-338
364-386
412-434
436-458
460-482
532-553
508-531
IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
Molecular Function GO:0004672 protein kinase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00220 Serine/Threonine 4.6e-29 679-1002
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 3.8e+02 91-114
139-162
163-187
236-260
283-306
362-386
410-434
458-482
530-553
554-579
IPR008271 Serine/threonine-protein kinase, active site
Molecular Function GO:0004674 protein serine/threonine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
PatternScan PS00108 PROTEIN_KINASE_ST NA 812-824
IPR011009 Protein kinase-like domain
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups    
superfamily SSF56112 Protein 4.7e-68 649-994
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 1e-13 25-64
IPR017441 Protein kinase, ATP binding site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00107 PROTEIN_KINASE_ATP NA 685-712
IPR020635 Tyrosine-protein kinase, catalytic domain
Molecular Function GO:0004713 protein tyrosine kinase activity    
Biological Process GO:0006468 protein phosphorylation    
HMMSmart SM00219 Tyrosine 1.4e-14 679-994
no_ID  
FPrintScan PR00019 LEURICHRPT 1.3e-05 142-155
530-543
Gene3D G3DSA:1.10.510.10 no description 1e-38 966-994
Gene3D G3DSA:3.30.200.20 no description 1e-17 635-734
Gene3D G3DSA:3.80.10.10 no description 4.7e-62 24-310
311-592
HMMPanther PTHR24420 FAMILY 0 74-1001
HMMPanther PTHR24420:SF44 SUBFAMILY 0 74-1001
HMMPfam PF13855 LRR_8 1.1e-07 237-296
436-495
507-567
HMMSmart SM00365 Leucine-rich 53 139-171
283-306
313-339
530-553
Seg seg seg NA 186-198
285-303
630-638
935-946
superfamily SSF52058 L 8.2e-67 339-600
21-336
Putative transmembrane regions
  From To
TM segments
SOSUI		 2 24
619 641
Wolf-PSORT
Lj1g3v1060470.1	plas 4, extr 4, vacu 2, cysk_plas 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v1060470.1