Miyakogusa Predicted Gene

Lj1g3v0862950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KAC9_SOYBN 883 82.5 88.2 (tr|I1KAC9) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G15960.1 592 56.3 73.0 | Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527
Medicago Medtr3g088440.1 830 79.6 86.8 | NRAMP metal ion transporter 6 | HC | chr3:40141672-40136599 | 20130731
Soybean Glyma06g12190.1 883 82.5 88.2  
LJGI gnl|LJGI|DC594872 771 99.5 99.5 similar to UniRef100_Q68G88 Cluster: Root-specific metal transporter; n=1; Malus baccata|Rep: Root-specific metal transporter - Malus baccata, partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0862950.1 length: 541 aa.
IPR001046 Natural resistance-associated macrophage like
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00447 NATRESASSCMP 1.3e-65 126-152
154-173
179-200
229-252
339-358
367-384
399-418
HAMAP MF_00221 NRAMP 38.043 28-455
HMMPanther PTHR11706 MANGANESE 0 2-541
HMMPfam PF01566 Nramp 9.3e-118 68-429
HMMTigr TIGR01197 nramp: 2.1e-120 45-421
no_ID  
HMMPanther PTHR11706:SF10 METAL 0 2-541
Seg seg seg NA 162-174
381-390
Putative transmembrane regions
  From To
TM segments
SOSUI
81 103
115 137
148 170
182 204
227 249
270 292
331 353
368 390
396 418
432 454
467 489
Wolf-PSORT
Lj1g3v0862950.1	plas 9, chlo 2, cyto 1, vacu 1, pero 1, chlo_mito 1, cyto_pero 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0862950.1