Miyakogusa Predicted Gene
- Lj1g3v0862950.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v0862950.1 CUFF.26466.1
(1626 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC594872 similar to UniRef100_Q68G88 Cluster: Root-spec... 771 0.0
gnl|LJGI|TC81922 similar to UniRef100_A7NVG8 Cluster: Chromosome... 502 e-141
gnl|LJGI|BP072596 similar to UniRef100_Q68G88 Cluster: Root-spec... 339 3e-92
gnl|LJGI|BP061751 similar to UniRef100_A7NVG6 Cluster: Chromosom... 305 5e-82
gnl|LJGI|TC74518 similar to UniRef100_Q68G88 Cluster: Root-speci... 262 6e-69
gnl|LJGI|TC78207 214 1e-54
gnl|LJGI|TC61152 similar to UniRef100_A7NVG8 Cluster: Chromosome... 121 1e-26
gnl|LJGI|DC593672 similar to UniRef100_A7NVG9 Cluster: Chromosom... 113 4e-24
gnl|LJGI|DC594322 similar to UniRef100_A7NVG8 Cluster: Chromosom... 100 5e-20
>gnl|LJGI|DC594872 similar to UniRef100_Q68G88 Cluster: Root-specific metal transporter;
n=1; Malus baccata|Rep: Root-specific metal transporter -
Malus baccata, partial (24%)
Length = 397
Score = 771 bits (389), Expect = 0.0
Identities = 395/397 (99%)
Strand = Plus / Plus
Query: 652 cctaaactcagcggtcatggagccacaggcgatgccattgcccttttgggtgcccttgtc 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cctaaactcagcggtcatggagccacaggcgatgccattgcccttttgggtgcccttgtc 60
Query: 712 atgccacacaatcttttcctccactctgctctggtgctgtctagaaaagtgcctacttcc 771
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgccacacaatcttttcctccactctgctctggtgctgtctagaaaagtgcctacttcc 120
Query: 772 gtacgtggcatcaatgatgcatgtaaatactttctcatagagagtggattcgcattgttt 831
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtacgtggcatcaatgatgcatgtaaatactttctcatagagagtggattcgcattgttt 180
Query: 832 gtggcgtttctaatcaatgttgcaatgatttctgtgtctggcactgtttgctctgctacc 891
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtggcgtttctaatcaatgttgcaatgatttctgtgtctggcactgtttgctctgctacc 240
Query: 892 aacctttctgcagaaacttctgatcaatgcagcgaccttacccttaactctgcttctttc 951
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aacctttctgcagaaacttctgatcaatgcagcgaccttacccttaactctgcttctttc 300
Query: 952 cttcttaagaatgtgttgggacggtcgagctcaaccatttatgccatagcattgctggca 1011
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttcttaagaatgtgttgggacggtcgagctcaaccatttatgccatagcattgctggca 360
Query: 1012 tcaggacaaagttccaccatcactggaacctatgcag 1048
|||||| |||||||||||||||||||||||||||||
Sbjct: 361 tcaggaacaagttccaccatcactggaacctatgcag 397
>gnl|LJGI|TC81922 similar to UniRef100_A7NVG8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 901
Score = 502 bits (253), Expect = e-141
Identities = 589/701 (84%)
Strand = Plus / Plus
Query: 815 gtggattcgcattgtttgtggcgtttctaatcaatgttgcaatgatttctgtgtctggca 874
|||| |||||| | ||||| || ||||||||||||||||||||||||||||| | ||||
Sbjct: 1 gtgggttcgcactctttgtagcatttctaatcaatgttgcaatgatttctgtcacgggca 60
Query: 875 ctgtttgctctgctaccaacctttctgcagaaacttctgatcaatgcagcgaccttaccc 934
||||||| | ||| | ||||||||||||||||| | |||||| |||| || |||||||
Sbjct: 61 ctgtttgttttgccaacaacctttctgcagaaaatactgatcggtgcaatgatcttaccc 120
Query: 935 ttaactctgcttctttccttcttaagaatgtgttgggacggtcgagctcaaccatttatg 994
||||||||||||| |||||||| ||||||| ||||||| |||| ||||||||| ||||||
Sbjct: 121 ttaactctgcttccttccttctgaagaatgcgttgggaaggtctagctcaaccgtttatg 180
Query: 995 ccatagcattgctggcatcaggacaaagttccaccatcactggaacctatgcagggcaat 1054
|||||||| | || || ||||||||||| || || || ||||||||||||||||| || |
Sbjct: 181 ccatagcacttctagcctcaggacaaagctctactataactggaacctatgcaggacagt 240
Query: 1055 acattatgcagggtttcttagacttaaagatgaaaacatggaaaaggaacttggtgacaa 1114
||||||||||||||||||| || |||||||||||| ||||||||||||||| |||| |
Sbjct: 241 acattatgcagggtttcttggagataaagatgaaaagatggaaaaggaacttaatgacta 300
Query: 1115 ggatcattgccataacacctagtcttgttgtctctatcattggtggttcttctggtgctg 1174
|| |||||||||| ||||||||||| |||| || |||||||||||||||||||| |
Sbjct: 301 ggtgcattgccatagcacctagtcttattgtttccatcattggtggttcttctggatcca 360
Query: 1175 gtcgacttatcgtcatcgcatcgatgatactttcttttgagctcccattcgctttaattc 1234
|||| ||||| |||| ||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct: 361 gtcgccttattatcattgcatcaatgatactttcttttgagcttccatttgctttaattc 420
Query: 1235 cgctccttaagttcagcagtagcagtactaaaatgggacctcataagaattctttgttta 1294
| || || ||||| ||| | |||||||| || ||||||||||| |||| ||||||| |||
Sbjct: 421 cacttctcaagtttagctgcagcagtaccaagatgggacctcacaagagttctttgatta 480
Query: 1295 tcattatcttctcatggatactaggtatggggattatctgtatcaatgtgtactacctca 1354
|||||||| |||||||||||||||| | || || || || ||||||||||| |||||
Sbjct: 481 tcattatcatctcatggatactaggcttaggcatcattggtgccaatgtgtacttcctca 540
Query: 1355 ttaccgcttttgtggattggataattcataatagtttaccaaaggtggcaaatgtgttca 1414
|| | |||||| | ||| ||||||||| ||| | ||||||||||||||||||||||
Sbjct: 541 gcacttcctttgtgaagtggctaattcatagcagtcttccaaaggtggcaaatgtgttca 600
Query: 1415 ttgggatcttagtgtttcctctgattgcgatctatattctctcagttatctacctcacat 1474
|||||| |||||||||||||||| || | ||||| ||||| ||||||||| ||||
Sbjct: 601 ttgggactatagtgtttcctctgatggcagtttatatcatctcaactatctacctaacat 660
Query: 1475 tcagaaaagacactgtcgaaacatatatcgagacaaagaat 1515
| |||||||||||||| | | ||||| ||||||||||||
Sbjct: 661 ttagaaaagacactgttaagatatatactgagacaaagaat 701
>gnl|LJGI|BP072596 similar to UniRef100_Q68G88 Cluster: Root-specific metal
transporter; n=1; Malus baccata|Rep: Root-specific metal
transporter - Malus baccata, partial (21%)
Length = 369
Score = 339 bits (171), Expect = 3e-92
Identities = 315/363 (86%)
Strand = Plus / Plus
Query: 123 gaaaccatggagagagttcttgacatatgtaggtcccggttttctagtctccttggctta 182
|||| |||||||| |||||||||||||||| || || ||||| ||||||||||| |||||
Sbjct: 1 gaaagcatggagaaagttcttgacatatgttggacctggtttcctagtctccttagctta 60
Query: 183 ccttgatcctggaaacatggaaactgatttgcaggcgggagccaaccacaaatatgagct 242
|||||| ||||||||||||||||||||| |||| || ||||| | ||||| |||||||||
Sbjct: 61 ccttgaccctggaaacatggaaactgatctgcaagctggagctagccacagatatgagct 120
Query: 243 gctgtgggtgatacttattgggttggtgtttgctcttataattcagtcattggctgcaaa 302
| ||||| || |||| |||| || | ||||| ||||||||||||||||||||||| ||
Sbjct: 121 gttgtggttggtactggttggactgatatttgcacttataattcagtcattggctgcgaa 180
Query: 303 tttaggcgtttgtaccggcaaacacctttcagaagtatgtaaagcagagtacccattatt 362
| ||||| ||||| |||||||||||||||||||| ||| |||||||||||||
Sbjct: 181 cctcggcgtgatcaccgggaaacacctttcagaagtatgcaaaattgagtacccattatc 240
Query: 363 tgtcaagtactgcttgtggttattagcagaggctgctgtcatagctgcagacatacctga 422
||| ||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||
Sbjct: 241 tgtgaagtactgcttgtggttattagctgaggttgctgtcatagcttcagacatacctga 300
Query: 423 agtgattggcacagcctttgcacttaacatactcttccacataccagtatgggttggagt 482
||||||||||||||||||| | |||||||||||||||||||| || ||||||| |||||
Sbjct: 301 agtgattggcacagccttttctcttaacatactcttccacatccctttatgggtaggagt 360
Query: 483 tct 485
|||
Sbjct: 361 tct 363
>gnl|LJGI|BP061751 similar to UniRef100_A7NVG6 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 487
Score = 305 bits (154), Expect = 5e-82
Identities = 307/358 (85%)
Strand = Plus / Minus
Query: 933 ccttaactctgcttctttccttcttaagaatgtgttgggacggtcgagctcaaccattta 992
|||||||||||||||||||||||| |||||| ||||||||||| ||||||||| ||||
Sbjct: 415 ccttaactctgcttctttccttctcaagaataccttgggacggtcaagctcaaccgttta 356
Query: 993 tgccatagcattgctggcatcaggacaaagttccaccatcactggaacctatgcagggca 1052
||| |||||| | || || ||||||||||| || || || ||||||||||||||||| ||
Sbjct: 355 tgcgatagcacttcttgcttcaggacaaagctctactataactggaacctatgcaggaca 296
Query: 1053 atacattatgcagggtttcttagacttaaagatgaaaacatggaaaaggaacttggtgac 1112
|||||||||||||||||||| || |||||||||||| |||||||||||||||| ||||
Sbjct: 295 gtacattatgcagggtttcttggagataaagatgaaaagatggaaaaggaacttgatgac 236
Query: 1113 aaggatcattgccataacacctagtcttgttgtctctatcattggtggttcttctggtgc 1172
||| |||| |||| ||||||||||| |||| || |||||||||||||||||||| |
Sbjct: 235 taggtgcatttgcatagcacctagtcttattgtttccatcattggtggttcttctgggtc 176
Query: 1173 tggtcgacttatcgtcatcgcatcgatgatactttcttttgagctcccattcgctttaat 1232
|||||| ||||| |||| ||||| |||||||||||||||||||| ||||| ||||||||
Sbjct: 175 tggtcgccttattatcattgcatcaatgatactttcttttgagcttccatttgctttaat 116
Query: 1233 tccgctccttaagttcagcagtagcagtactaaaatgggacctcataagaattctttg 1290
||| || || ||||| ||| | |||||||| || ||||||||||| | || |||||||
Sbjct: 115 tccacttctcaagtttagctgcagcagtaccaagatgggacctcacaggagttctttg 58
>gnl|LJGI|TC74518 similar to UniRef100_Q68G88 Cluster: Root-specific metal
transporter; n=1; Malus baccata|Rep: Root-specific metal
transporter - Malus baccata, partial (23%)
Length = 491
Score = 262 bits (132), Expect = 6e-69
Identities = 264/308 (85%)
Strand = Plus / Plus
Query: 200 tggaaactgatttgcaggcgggagccaaccacaaatatgagctgctgtgggtgatactta 259
||||||||||| |||| || ||||| | ||||| |||||||||| ||||| || ||||
Sbjct: 184 tggaaactgatctgcaagctggagctagccacagatatgagctgttgtggttggtactgg 243
Query: 260 ttgggttggtgtttgctcttataattcagtcattggctgcaaatttaggcgtttgtaccg 319
|||| || | ||||| ||||||||||||||||||||||| || | ||||| ||||
Sbjct: 244 ttggactgatatttgcacttataattcagtcattggctgcgaacctcggcgtgatcaccg 303
Query: 320 gcaaacacctttcagaagtatgtaaagcagagtacccattatttgtcaagtactgcttgt 379
| |||||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||
Sbjct: 304 ggaaacacctttcagaagtatgcaaaattgagtacccattatctgtgaagtactgcttgt 363
Query: 380 ggttattagcagaggctgctgtcatagctgcagacatacctgaagtgattggcacagcct 439
|||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 364 ggttattagctgaggttgctgtcatagcttcagacatacctgaagtgattggcacagcct 423
Query: 440 ttgcacttaacatactcttccacataccagtatgggttggagttctcttaactggctgca 499
|| | |||||||||||||||||||| || ||||||| |||||||| | | ||||||||
Sbjct: 424 tttctcttaacatactcttccacatccctttatgggtaggagttctgatgagtggctgca 483
Query: 500 gcactctc 507
||||||||
Sbjct: 484 gcactctc 491
Score = 89.7 bits (45), Expect = 5e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 123 gaaaccatggagagagttcttgacatatgtaggtcccggttttctagtctccttggctta 182
|||| |||||||| |||||||||||||||| || || ||||| ||||||||||| |||||
Sbjct: 1 gaaagcatggagaaagttcttgacatatgttggacctggtttcctagtctccttagctta 60
Query: 183 ccttgatcctggaaaca 199
|||||| ||||||||||
Sbjct: 61 ccttgaccctggaaaca 77
>gnl|LJGI|TC78207
Length = 487
Score = 214 bits (108), Expect = 1e-54
Identities = 111/112 (99%)
Strand = Plus / Plus
Query: 1515 tgacccaatgatgcaaactcatgtggaaaaggggtttatgaacaatggtcaattagagct 1574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacccaatgatgcaaactcatgtggaaaaggggtttatgaacaatggtcaattagagct 60
Query: 1575 gagccaagttccttatagagaagatttagctgatatcccactaccacaatag 1626
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 61 gagccaagttccttatagagaagatttagctgatatcccactaccaccatag 112
>gnl|LJGI|TC61152 similar to UniRef100_A7NVG8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 777
Score = 121 bits (61), Expect = 1e-26
Identities = 193/237 (81%)
Strand = Plus / Plus
Query: 1279 aagaattctttgtttatcattatcttctcatggatactaggtatggggattatctgtatc 1338
|||| ||||||| ||||||||||| |||||||||||||||| | || || || || |
Sbjct: 3 aagagttctttgattatcattatcatctcatggatactaggcttaggcatcattggtgcc 62
Query: 1339 aatgtgtactacctcattaccgcttttgtggattggataattcataatagtttaccaaag 1398
|||||||||| ||||| || | |||||| | ||| ||||||||| ||| | ||||||
Sbjct: 63 aatgtgtacttcctcagcacttcctttgtgaagtggctaattcatagcagtcttccaaag 122
Query: 1399 gtggcaaatgtgttcattgggatcttagtgtttcctctgattgcgatctatattctctca 1458
|||||||||||||||||||||| |||||||||||||||| || | ||||| |||||
Sbjct: 123 gtggcaaatgtgttcattgggactatagtgtttcctctgatggcagtttatatcatctca 182
Query: 1459 gttatctacctcacattcagaaaagacactgtcgaaacatatatcgagacaaagaat 1515
||||||||| ||||| |||||||||||||| | | ||||| ||||||||||||
Sbjct: 183 actatctacctaacatttagaaaagacactgttaagatatatactgagacaaagaat 239
>gnl|LJGI|DC593672 similar to UniRef100_A7NVG9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (55%)
Length = 408
Score = 113 bits (57), Expect = 4e-24
Identities = 150/181 (82%)
Strand = Plus / Plus
Query: 200 tggaaactgatttgcaggcgggagccaaccacaaatatgagctgctgtgggtgatactta 259
||||||||||| |||| || ||||| | ||||| |||||||||| ||||| || ||||
Sbjct: 228 tggaaactgatctgcaagctggagctagccacagatatgagctgttgtggttggtactgg 287
Query: 260 ttgggttggtgtttgctcttataattcagtcattggctgcaaatttaggcgtttgtaccg 319
|||| || | ||||| ||||||||||||||||||||||| || | ||||| ||||
Sbjct: 288 ttggactgatatttgcacttataattcagtcattggctgcgaacctcggcgtgatcaccg 347
Query: 320 gcaaacacctttcagaagtatgtaaagcagagtacccattatttgtcaagtactgcttgt 379
| |||||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||
Sbjct: 348 ggaaacacctttcagaagtatgcaaaattgagtacccattatctgtgaagtactgcttgt 407
Query: 380 g 380
|
Sbjct: 408 g 408
Score = 91.7 bits (46), Expect = 1e-17
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 122 agaaaccatggagagagttcttgacatatgtaggtcccggttttctagtctccttggctt 181
||||| |||||||| |||||||||||||||| || || ||||| ||||||||||| ||||
Sbjct: 44 agaaagcatggagaaagttcttgacatatgttggacctggtttcctagtctccttagctt 103
Query: 182 accttgatcctggaaaca 199
||||||| ||||||||||
Sbjct: 104 accttgaccctggaaaca 121
>gnl|LJGI|DC594322 similar to UniRef100_A7NVG8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 593
Score = 99.6 bits (50), Expect = 5e-20
Identities = 92/106 (86%)
Strand = Plus / Plus
Query: 498 cagcactctcttgcttcttggtctccagagatttggggtaaggaagttggagctgcttat 557
|||||||||||||||||| |||| |||||||||||||| ||||||||||| || || ||
Sbjct: 1 cagcactctcttgcttctgagtctgcagagatttggggtgaggaagttggaactactgat 60
Query: 558 atcaatcctagtttttgtgatggctgcatgtttctttgtggaaatg 603
| ||||||||||||| | |||||||| |||||||| | |||||||
Sbjct: 61 aacaatcctagttttcataatggctgcgtgtttcttcgcggaaatg 106
Score = 79.8 bits (40), Expect = 5e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 718 cacaatcttttcctccactctgctctggtgctgtctagaaaagt 761
||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 352 cacaatcttttcctccactctgctctggttctgtctagaaaagt 395
Score = 56.0 bits (28), Expect = 7e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 799 tactttctcatagagagtggattcgcattgtttgtggcgtttctaatcaatgttgcaatg 858
|||||||| ||||| || || || ||||||||||| || ||||| |||||||||||||||
Sbjct: 531 tactttcttatagaaagcgggttagcattgtttgtagcatttctgatcaatgttgcaatg 590