Miyakogusa Predicted Gene

Lj1g3v0807620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KA90_SOYBN 490 85.6 88.4 (tr|I1KA90) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G18340.1 367 65.0 77.6 | Symbols: | basal transcription factor complex subunit-related | chr1:6311612-6313734 REVERSE LENGTH=301
Medicago Medtr3g072430.1 482 82.6 86.8 | general transcription factor IIH subunit, putative | HC | chr3:32560390-32566153 | 20130731
Soybean Glyma06g11810.1 490 85.6 88.4  
LJGI gnl|LJGI|TC72596 618 100.0 100.0 similar to UniRef100_Q9LPQ2 Cluster: F15H18.15; n=1; Arabidopsis thaliana|Rep: F15H18.15 - Arabidopsis thaliana (Mouse-ear cress), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0807620.1 length: 294 aa.
IPR004600 TFIIH subunit Tfb4/p34
method AccNumber shortName E-value location
Cellular Component GO:0000439 core TFIIH complex    
Biological Process GO:0006289 nucleotide-excision repair    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPanther PTHR12831 TRANSCRIPTION 1.9e-102 6-293
HMMPfam PF03850 Tfb4 7e-91 13-274
no_ID  
HMMPanther PTHR12831:SF0 GENERAL 1.9e-102 6-293
Seg seg seg NA 25-37
119-127
284-294
Wolf-PSORT
Lj1g3v0807620.1	nucl 10, cyto 2, chlo 1, mito 1, chlo_mito 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0807620.1