| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7M756_SOYBN | 1449 | 51.1 | 61.5 | (tr|K7M756) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G00990.1 | 506 | 50.7 | 64.0 | | Symbols: | Transcription factor jumonji (jmjC) domain-containing protein | chr4:427035-431535 FORWARD LENGTH=840 |
| Medicago | Medtr1g008060.2 | 1340 | 49.5 | 59.3 | | transcription factor jumonji (JmjC) domain protein, putative | HC | chr1:708137-717059 | 20130731 |
| Soybean | Glyma14g25920.1 | 1194 | 67.7 | 76.5 | |
| LJGI | gnl|LJGI|BP028413 | 496 | 99.6 | 99.6 | similar to UniRef100_O04698 Cluster: Chloroplast DNA-binding protein PD3; n=1; Pisum sativum|Rep: Chloroplast DNA-binding protein PD3 - Pisum sativum (Garden pea), partial (5%) |
| Lj1g3v0725870.1 | length: 1584 aa. | |||
| IPR001841 | Zinc finger, RING-type | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0005515 | protein binding | ||
| Molecular Function | GO:0008270 | zinc ion binding | ||
| ProfileScan | PS50089 | ZF_RING_2 | 8.875 | 661-707 |
| IPR003347 | JmjC domain | |||
| Molecular Function | GO:0005515 | protein binding | ||
| HMMPfam | PF02373 | JmjC | 1e-16 | 1426-1530 |
| HMMSmart | SM00558 | A | 1.7e-77 | 1050-1547 |
| ProfileScan | PS51184 | JMJC | 21.954 | 1057-1547 |
| IPR017956 | AT hook, DNA-binding motif | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| HMMSmart | SM00384 | DNA | 85 | 164-174 263-275 293-305 325-337 359-371 393-405 534-546 |
| no_ID | ||||
| HMMPanther | PTHR12549 | JMJC | 6.1e-284 | 649-1581 |
| HMMPanther | PTHR12549:SF1 | TRANSCRIPTION | 6.1e-284 | 649-1581 |
| Seg | seg | seg | NA | 281-293 324-333 707-717 736-750 1207-1222 |
| superfamily | SSF51197 | Clavaminate | 1.9e-39 | 948-1583 |
Lj1g3v0725870.1 nucl 13
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj1g3v0725870.1 | Not targeted | -42.613 | -0.054 | -4.252 | 59.33% | -38.307 |