Miyakogusa Predicted Gene

Lj1g3v0725870.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v0725870.1 tr|O82022|O82022_MEDTR ENBP1 protein OS=Medicago
truncatula GN=ENBP1 PE=4 SV=1,50.03,0,DNA binding domain with
preference for A/T r,AT hook, DNA-binding motif; A domain family that
is par,CUFF.26233.1
         (4758 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP028413 similar to UniRef100_O04698 Cluster: Chloropla...   496   e-139
gnl|LJGI|TC64175 similar to UniRef100_A7QWE7 Cluster: Chromosome...   100   2e-19

>gnl|LJGI|BP028413 similar to UniRef100_O04698 Cluster: Chloroplast DNA-binding protein
            PD3; n=1; Pisum sativum|Rep: Chloroplast DNA-binding
            protein PD3 - Pisum sativum (Garden pea), partial (5%)
          Length = 528

 Score =  496 bits (250), Expect = e-139
 Identities = 253/254 (99%)
 Strand = Plus / Minus

                                                                        
Query: 4505 accttggcgaggctgttttcatacctgcagggtgcccacatcaagtgagaaatagaaagt 4564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528  accttggcgaggctgttttcatacctgcagggtgcccacatcaagtgagaaatagaaagt 469

                                                                        
Query: 4565 cttgcatgaaagtggctctggactttgtttcacctgagaatgttcaggaatgcgttcgat 4624
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468  cttgcatgaaagtggctctggactttgtttcacctgagaatgttcaggaatgcgttcgat 409

                                                                        
Query: 4625 tgacagaggaatttcgaatgcttccgaaaggccatagatctaaggaagataaattggaga 4684
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408  tgacagaggaatttcgaatgcttccgaaaggccatagatctaaggaagataaattggaga 349

                                                                        
Query: 4685 taaagaagatggcactgtatgccactgatattgccataacagaagctacaaaactgatgg 4744
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 348  taaagaagatggcactgtatgccactgatattgccataacagaagctacaaaactgatgt 289

                          
Query: 4745 gagctaaatgagtt 4758
            ||||||||||||||
Sbjct: 288  gagctaaatgagtt 275


>gnl|LJGI|TC64175 similar to UniRef100_A7QWE7 Cluster: Chromosome undetermined
            scaffold_203, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_203, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (20%)
          Length = 754

 Score = 99.6 bits (50), Expect = 2e-19
 Identities = 104/122 (85%)
 Strand = Plus / Plus

                                                                        
Query: 4439 taaatgagaagcataaaagacagcttaagaaagagtatggcattgaaccatggacgtttg 4498
            ||||||||| |||||||| ||||||||| |  ||||     |||||||||||||| ||||
Sbjct: 262  taaatgagaggcataaaaaacagcttaaaagggagttcaatattgaaccatggacttttg 321

                                                                        
Query: 4499 agcaacaccttggcgaggctgttttcatacctgcagggtgcccacatcaagtgagaaata 4558
            ||||||||||||| |||||||||||||| || ||||| || || |||||||| |||||||
Sbjct: 322  agcaacaccttggtgaggctgttttcattccagcaggatgtcctcatcaagtcagaaata 381

              
Query: 4559 ga 4560
            ||
Sbjct: 382  ga 383