Miyakogusa Predicted Gene

Lj1g3v0415250.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KVT9_SOYBN 2169 70.8 77.5 (tr|K7KVT9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G48050.2 1134 45.0 59.7 | Symbols: | BAH domain ;TFIIS helical bundle-like domain | chr3:17734270-17739412 REVERSE LENGTH=1613
Medicago Medtr6g007787.1 630 48.6 63.3 | BAH domain; TFIIS helical bundle-like domain protein, putative | HC | chr6:1984298-1978119 | 20130731
Soybean Glyma04g35100.1 2115 71.2 78.2  
LJGI gnl|LJGI|BW622530 932 99.6 99.6 similar to UniRef100_A7PME6 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0415250.1 length: 1608 aa.
IPR001025 Bromo adjacent homology (BAH) domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF01426 BAH 1.2e-06 36-144
HMMSmart SM00439 Bromo 6.5e-20 35-150
ProfileScan PS51038 BAH 15.575 35-150
IPR003617 Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMSmart SM00509 Domain 3.2e-17 321-400
IPR017923 Transcription factor IIS, N-terminal
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006351 transcription, DNA-dependent    
Gene3D G3DSA:1.20.930.10 no description 3.2e-27 302-408
HMMPfam PF08711 Med26 2.5e-14 349-398
ProfileScan PS51319 TFIIS_N 20.377 324-401
superfamily SSF47676 Conserved 2.2e-19 301-415
no_ID  
HMMPanther PTHR15141 TRANSCRIPTION 5.1e-124 1-837
HMMPanther PTHR15141:SF14 ELONGIN-A-RELATED 5.1e-124 1-837
Seg seg seg NA 17-26
61-72
182-193
515-528
923-936
1093-1112
Wolf-PSORT
Lj1g3v0415250.1	nucl 11, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0415250.1