Miyakogusa Predicted Gene
- Lj1g3v0415250.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj1g3v0415250.1 Non Chatacterized Hit- tr|I1JX47|I1JX47_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52322
PE,72.85,0,seg,NULL; BAH,Bromo adjacent homology (BAH) domain;
TFIIS_N,Transcription factor IIS, N-terminal; EL,CUFF.25747.1
(1608 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48050.2 | Symbols: | BAH domain ;TFIIS helical bundle-like ... 1134 0.0
AT3G48050.1 | Symbols: | BAH domain ;TFIIS helical bundle-like ... 1134 0.0
AT3G48060.1 | Symbols: | BAH domain ;TFIIS helical bundle-like ... 1099 0.0
AT4G11560.1 | Symbols: | bromo-adjacent homology (BAH) domain-c... 79 2e-14
AT4G24200.1 | Symbols: | Transcription elongation factor (TFIIS... 68 4e-11
AT2G25120.1 | Symbols: | Bromo-adjacent homology (BAH) domain-c... 56 2e-07
AT4G23120.1 | Symbols: | Bromo-adjacent homology (BAH) domain-c... 52 4e-06
>AT3G48050.2 | Symbols: | BAH domain ;TFIIS helical bundle-like
domain | chr3:17734270-17739412 REVERSE LENGTH=1613
Length = 1613
Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 725/1612 (44%), Positives = 963/1612 (59%), Gaps = 79/1612 (4%)
Query: 32 KDGRKISIGECALFKSSQGCPPFIGIIHCXXXXXXXXXXXXVNWLYRPIEVELSKGVPLE 91
KDGRKIS+G+CALFK Q CPPFIGII VNWLYRP E++L KG+ LE
Sbjct: 46 KDGRKISVGDCALFKPPQDCPPFIGIIRLIIAEEEDKLKLGVNWLYRPTELKLGKGILLE 105
Query: 92 AAPNKIFYSFHRDEINAELLLHPCKVAFLPKGAELPSGISSFVCRRVYDVANKCLWWLND 151
A PN++FYSFH D I A LLHPCKVAFLP+G ELPSGISSFVCRRVYDV N+ LWWL D
Sbjct: 106 AEPNELFYSFHEDNIPAASLLHPCKVAFLPRGVELPSGISSFVCRRVYDVTNERLWWLTD 165
Query: 152 QGHINDCQ-EVHELLNRTCVEMHATVQSDGRXXXXXXXXXXXXQLKSVSDGVQNSASFSS 210
Q +I+D Q EV +LL +T EMH T+Q GR DG+QNS SF S
Sbjct: 166 QDYIDDRQLEVDKLLCKTRSEMHTTLQQGGRSPKSMNSPTTSQP----KDGIQNSNSFLS 221
Query: 211 HVKGRKRERVDQGSEPVKRERSGKVEDGDSGNFRPDNILKTEISKITENGGLVDSEGVEK 270
KGRKRER+D GSE VKRERS +V+D SG R ++ LK+EI K TE GGLVDSEGVEK
Sbjct: 222 QGKGRKRERMDHGSESVKRERSSRVDDSGSGPLRTESGLKSEILKFTEKGGLVDSEGVEK 281
Query: 271 LVQLMVPDKIEKQIDLACRSLLAAVIAATDKVNCLSQFVQLRGLPVFDEWLQEVHKGKIG 330
LVQLM+P++ EK+IDL R++LA V+AATDK +CLS+FVQLRGLPVFDEWLQEVHKGK+G
Sbjct: 282 LVQLMLPERNEKKIDLVGRAILAGVVAATDKFDCLSRFVQLRGLPVFDEWLQEVHKGKVG 341
Query: 331 DGIGSREGDKSVEEFLLVLLRALYKLPVNLQALKMCNIGKSVNHLRTHKNTEIQKKARGL 390
DG ++ D+ V++FLLVLLRAL KLPVNL AL+ CNIGKSVNHLR+HKN+EI KKAR L
Sbjct: 342 DGGSPKDSDRLVDDFLLVLLRALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSL 401
Query: 391 VDTWKKRVEAEMKSNDAKYRPTVSWPAKPRLPDVGQGGNRNSGASSDVAMKSSVTQHSVS 450
VDTWKKRVEAEM + + VSWP + + GG R+SG S++ A K+S + S
Sbjct: 402 VDTWKKRVEAEMDAKSGSNQ-GVSWPGR-----LSHGG-RHSGGSAE-ANKTSSSHLHAS 453
Query: 451 KTASVKIALGENTTRTASTSAFPDLAKSVLSPASATTNLKDGQPRVGSMSGGSDHPMTNA 510
K+ SVK + EN + +TS P +S SP S KDGQ R + +GG +
Sbjct: 454 KSVSVKQQV-ENNLKCVATS--PGSTRSAPSPGSGGNVSKDGQQR-NAGAGGVSEVLAAV 509
Query: 511 RDEKXXXXXXXXXXXXX-XGDHAKTAGLSGKEDARSSTAMSA-NKLSGGSSRHRKSTNGL 568
+DEK +HAKT L GKEDARSSTA S K SGGSSRHRKS N
Sbjct: 510 KDEKSSSSSQSHNNSQSCSSEHAKTGNLCGKEDARSSTAGSTLKKCSGGSSRHRKSNNVF 569
Query: 569 SGSAPSGGKRETGSCRNSSLHKSSTSEKISQSRLM-EKTLDETSIEGNTPKLIVKISNHG 627
GS+ S R G R+ S H++ SEKISQS L EKTL+ EG+ KLIVK+ N G
Sbjct: 570 QGSSSSASPRGAGLSRSFSSHRNVPSEKISQSSLTSEKTLEVPLTEGSGNKLIVKLPNRG 629
Query: 628 RGPAQRANVGSFEDPAIMNSRASSPVLSEKQDQFDHSSKEKNDFHQANIGSDIHTESWQS 687
R PAQ + GS EDPA +NSR SSPV + KQ+ D++ +EKN ++ N+ S ++ ESWQS
Sbjct: 630 RSPAQSVSGGSLEDPAPVNSRVSSPVHAVKQELCDNNGREKNHSYRPNVSSVLNAESWQS 689
Query: 688 NDFKDVLTGSDEGDGSPTAVTDVERCRTGDDCKKTLEVSKT--ASSSSGNENKDRNLQDA 745
N+ KD+LTGS E GSP D ER G D K + + S +SS GNE K
Sbjct: 690 NELKDILTGSQEAAGSPLVAGD-ER---GGDLKDSDKASGNVKGTSSLGNEFKSGERHGG 745
Query: 746 SYSSINALIEG-VKYSE-------ADDIGMNLLASVAAGEISKSELLTAAGSPERNTATA 797
+ SS+NALIE V+YSE +DD+GMNLLASVAA E+SKS + + + S N+
Sbjct: 746 TLSSMNALIESCVRYSETNASLAGSDDVGMNLLASVAADEMSKSPVASPSVSQPPNSVMN 805
Query: 798 ELSCTANGVVKSSEENLVQDECQSN-TGLGTEQRNQGSISGDSRMYD--GNADFRASEGK 854
E S N + + L ++ Q+ T + TEQ Q S +++ N K
Sbjct: 806 ENSTVGNNTKLMASDGLPHEQHQAVCTSVSTEQGEQHVSSSGTQLESEIKNESKTGDRDK 865
Query: 855 ASRGLLNACSMDCQQVTESNLEIKGKLYENPISTKLGGLPESTVQEARDGDSSEKMQEDS 914
+S Q ESN G + + TK + E + ++ G+ + +
Sbjct: 866 SSNSDTEDLQRLVDQCLESNDNSDGVVASPALPTK--AVKEKILNDSDSGELKDIKTDVK 923
Query: 915 VQGEITSEXXXXXXXXXXXXXXETIEKLSCPSVDVNSNKCTAEGSSGGEQTAQKPPAILE 974
+ + TS+ + +K+ +V+ + EG ++ +KPP L
Sbjct: 924 SEADCTSDSTKRVASSMLTECRDVSKKVDSVAVE----QTPLEGVD-DDKKEEKPPTAL- 977
Query: 975 QSDSARGTKENAIHSCGVDKVPDDHNVQE--YEKTDDMASENHASQSKKQRVGGESDT-- 1030
S+ + +E+ S G+ + D ++ E +++A NH Q +++ + DT
Sbjct: 978 SSELVKKVEEDVPVSSGISRDMDAVSIGRPITEMVNNVAF-NHMDQKDVKKIKQDCDTSV 1036
Query: 1031 -LMKSENRGLCTSPPGFDAEHVEQNSEIKQVHDQDVGQMLHKASPSFCSQEMDKHLDSKG 1089
+K + GL +S E VE N E +V ++ G +A+P +E + G
Sbjct: 1037 GAIKDTSAGLDSSVTKGKVEPVEGNLENSEVKERYSGL---RATPGLSPKEAEDLERPNG 1093
Query: 1090 SKLXXXXXXXXX--XXXXXXXXXXXMSVAALSDADAKVEFDLNEGLNADDGNCGEFNSIT 1147
K + +A S+ DA+VEFDLNEG + DD G+ N+ +
Sbjct: 1094 PKTSDADGDEAGECTSAARDASSVSAAASAGSEMDARVEFDLNEGFDGDDAKHGDSNNFS 1153
Query: 1148 SSGCAPSVRL--ISPVPFPASSVSCGIPASVTVTAAAKGPFLPPEDLLRSKGELGWKGSA 1205
S L + +PFP + VS G AS+TV AAAKGPF+PPEDLLR+KG +GW+GSA
Sbjct: 1154 GSVFLTPTPLQPVKTLPFPVAPVSSGTRASITVAAAAKGPFVPPEDLLRNKGAVGWRGSA 1213
Query: 1206 ATSAFRPAEPRKVTEMPLGALTTAISDVAD--GRQRRPPLDIDLNVPDERTPDDVSSQNC 1263
ATSAFRPAEPRK ++ L T+ SD + G+Q R LD DLNVPDER +D++SQ
Sbjct: 1214 ATSAFRPAEPRKPQDVLLSINNTSTSDASTSAGKQTRTFLDFDLNVPDERVLEDLASQRS 1273
Query: 1264 AHHTDAVSLAANGPDPVCNKMVSTV--RYTGGMDLDLNQVDEASDVGYCSTSSGHKIDMR 1321
+ T+ S N D V + ++ + +GG+DLDLN+VD+++D+ + +S H++D
Sbjct: 1274 GNPTNCTSDITNSFDQVRSGVMGSALDHSSGGLDLDLNKVDDSTDMISYTMNSSHRLD-- 1331
Query: 1322 ASLMPVK-PSLVGPPNREMSVHRDFDLNNGPSLDEVTAEPSL-LSQLARSSFPSQPPVSE 1379
+S VK PS G RDFDLN+GP D+ EPS+ L+Q +RS PSQP +S
Sbjct: 1332 SSFQQVKLPSTGG--------RRDFDLNDGPVGDDAAVEPSMVLNQHSRSGLPSQPSLSG 1383
Query: 1380 LSVSTAEPGNFSSWLPSNGNTYSAVTISSIMPDRGDQPFAIVAPNGSHRFLNPASGSNQF 1439
+ V+ +FS+W P+ N YSAV++ IMP+RGDQPF ++A G R L P +G + F
Sbjct: 1384 IRVNGENMASFSTWFPA-ANAYSAVSMPPIMPERGDQPFPMIATRGPQRMLGPTTGVSSF 1442
Query: 1440 GPDVYRGPVF-SSPAVSYPSAPFEYPVFPFNSSFPLPSASISAGSTAYVYPTSSNRLCFP 1498
P+ YRGPV SSPA+ + S F+YPVFPF +SFP+ SA+ STA++ +SS R CFP
Sbjct: 1443 TPEGYRGPVLSSSPAMPFQSTTFQYPVFPFGNSFPVTSANFPGASTAHMDSSSSGRACFP 1502
Query: 1499 AVSSQLMGHASTVSSHFPRPYVVGFPD-GSNSSSAETSRKWPRQGLDLNAGPGGSDLEGR 1557
V+SQ++G V S++PRPY+VG P+ GSN + KW R GLDLN+GPGG + EGR
Sbjct: 1503 GVNSQILGPGVPVPSNYPRPYIVGLPNGGSNGGVLDNGAKWFRSGLDLNSGPGGHETEGR 1562
Query: 1558 DEILPLPSRQLPVASSHALAEEHARI-QLAGSVCKRKESDGGWDGYKRSSWQ 1608
DE L +RQL ++S L E+ AR+ Q++G V KRKE +GGWDGY++SSWQ
Sbjct: 1563 DEST-LVARQLSSSASLPLKEDQARMYQMSGGVLKRKEPEGGWDGYRQSSWQ 1613
>AT3G48050.1 | Symbols: | BAH domain ;TFIIS helical bundle-like
domain | chr3:17734270-17739412 REVERSE LENGTH=1613
Length = 1613
Score = 1134 bits (2934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 725/1612 (44%), Positives = 963/1612 (59%), Gaps = 79/1612 (4%)
Query: 32 KDGRKISIGECALFKSSQGCPPFIGIIHCXXXXXXXXXXXXVNWLYRPIEVELSKGVPLE 91
KDGRKIS+G+CALFK Q CPPFIGII VNWLYRP E++L KG+ LE
Sbjct: 46 KDGRKISVGDCALFKPPQDCPPFIGIIRLIIAEEEDKLKLGVNWLYRPTELKLGKGILLE 105
Query: 92 AAPNKIFYSFHRDEINAELLLHPCKVAFLPKGAELPSGISSFVCRRVYDVANKCLWWLND 151
A PN++FYSFH D I A LLHPCKVAFLP+G ELPSGISSFVCRRVYDV N+ LWWL D
Sbjct: 106 AEPNELFYSFHEDNIPAASLLHPCKVAFLPRGVELPSGISSFVCRRVYDVTNERLWWLTD 165
Query: 152 QGHINDCQ-EVHELLNRTCVEMHATVQSDGRXXXXXXXXXXXXQLKSVSDGVQNSASFSS 210
Q +I+D Q EV +LL +T EMH T+Q GR DG+QNS SF S
Sbjct: 166 QDYIDDRQLEVDKLLCKTRSEMHTTLQQGGRSPKSMNSPTTSQP----KDGIQNSNSFLS 221
Query: 211 HVKGRKRERVDQGSEPVKRERSGKVEDGDSGNFRPDNILKTEISKITENGGLVDSEGVEK 270
KGRKRER+D GSE VKRERS +V+D SG R ++ LK+EI K TE GGLVDSEGVEK
Sbjct: 222 QGKGRKRERMDHGSESVKRERSSRVDDSGSGPLRTESGLKSEILKFTEKGGLVDSEGVEK 281
Query: 271 LVQLMVPDKIEKQIDLACRSLLAAVIAATDKVNCLSQFVQLRGLPVFDEWLQEVHKGKIG 330
LVQLM+P++ EK+IDL R++LA V+AATDK +CLS+FVQLRGLPVFDEWLQEVHKGK+G
Sbjct: 282 LVQLMLPERNEKKIDLVGRAILAGVVAATDKFDCLSRFVQLRGLPVFDEWLQEVHKGKVG 341
Query: 331 DGIGSREGDKSVEEFLLVLLRALYKLPVNLQALKMCNIGKSVNHLRTHKNTEIQKKARGL 390
DG ++ D+ V++FLLVLLRAL KLPVNL AL+ CNIGKSVNHLR+HKN+EI KKAR L
Sbjct: 342 DGGSPKDSDRLVDDFLLVLLRALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSL 401
Query: 391 VDTWKKRVEAEMKSNDAKYRPTVSWPAKPRLPDVGQGGNRNSGASSDVAMKSSVTQHSVS 450
VDTWKKRVEAEM + + VSWP + + GG R+SG S++ A K+S + S
Sbjct: 402 VDTWKKRVEAEMDAKSGSNQ-GVSWPGR-----LSHGG-RHSGGSAE-ANKTSSSHLHAS 453
Query: 451 KTASVKIALGENTTRTASTSAFPDLAKSVLSPASATTNLKDGQPRVGSMSGGSDHPMTNA 510
K+ SVK + EN + +TS P +S SP S KDGQ R + +GG +
Sbjct: 454 KSVSVKQQV-ENNLKCVATS--PGSTRSAPSPGSGGNVSKDGQQR-NAGAGGVSEVLAAV 509
Query: 511 RDEKXXXXXXXXXXXXX-XGDHAKTAGLSGKEDARSSTAMSA-NKLSGGSSRHRKSTNGL 568
+DEK +HAKT L GKEDARSSTA S K SGGSSRHRKS N
Sbjct: 510 KDEKSSSSSQSHNNSQSCSSEHAKTGNLCGKEDARSSTAGSTLKKCSGGSSRHRKSNNVF 569
Query: 569 SGSAPSGGKRETGSCRNSSLHKSSTSEKISQSRLM-EKTLDETSIEGNTPKLIVKISNHG 627
GS+ S R G R+ S H++ SEKISQS L EKTL+ EG+ KLIVK+ N G
Sbjct: 570 QGSSSSASPRGAGLSRSFSSHRNVPSEKISQSSLTSEKTLEVPLTEGSGNKLIVKLPNRG 629
Query: 628 RGPAQRANVGSFEDPAIMNSRASSPVLSEKQDQFDHSSKEKNDFHQANIGSDIHTESWQS 687
R PAQ + GS EDPA +NSR SSPV + KQ+ D++ +EKN ++ N+ S ++ ESWQS
Sbjct: 630 RSPAQSVSGGSLEDPAPVNSRVSSPVHAVKQELCDNNGREKNHSYRPNVSSVLNAESWQS 689
Query: 688 NDFKDVLTGSDEGDGSPTAVTDVERCRTGDDCKKTLEVSKT--ASSSSGNENKDRNLQDA 745
N+ KD+LTGS E GSP D ER G D K + + S +SS GNE K
Sbjct: 690 NELKDILTGSQEAAGSPLVAGD-ER---GGDLKDSDKASGNVKGTSSLGNEFKSGERHGG 745
Query: 746 SYSSINALIEG-VKYSE-------ADDIGMNLLASVAAGEISKSELLTAAGSPERNTATA 797
+ SS+NALIE V+YSE +DD+GMNLLASVAA E+SKS + + + S N+
Sbjct: 746 TLSSMNALIESCVRYSETNASLAGSDDVGMNLLASVAADEMSKSPVASPSVSQPPNSVMN 805
Query: 798 ELSCTANGVVKSSEENLVQDECQSN-TGLGTEQRNQGSISGDSRMYD--GNADFRASEGK 854
E S N + + L ++ Q+ T + TEQ Q S +++ N K
Sbjct: 806 ENSTVGNNTKLMASDGLPHEQHQAVCTSVSTEQGEQHVSSSGTQLESEIKNESKTGDRDK 865
Query: 855 ASRGLLNACSMDCQQVTESNLEIKGKLYENPISTKLGGLPESTVQEARDGDSSEKMQEDS 914
+S Q ESN G + + TK + E + ++ G+ + +
Sbjct: 866 SSNSDTEDLQRLVDQCLESNDNSDGVVASPALPTK--AVKEKILNDSDSGELKDIKTDVK 923
Query: 915 VQGEITSEXXXXXXXXXXXXXXETIEKLSCPSVDVNSNKCTAEGSSGGEQTAQKPPAILE 974
+ + TS+ + +K+ +V+ + EG ++ +KPP L
Sbjct: 924 SEADCTSDSTKRVASSMLTECRDVSKKVDSVAVE----QTPLEGVD-DDKKEEKPPTAL- 977
Query: 975 QSDSARGTKENAIHSCGVDKVPDDHNVQE--YEKTDDMASENHASQSKKQRVGGESDT-- 1030
S+ + +E+ S G+ + D ++ E +++A NH Q +++ + DT
Sbjct: 978 SSELVKKVEEDVPVSSGISRDMDAVSIGRPITEMVNNVAF-NHMDQKDVKKIKQDCDTSV 1036
Query: 1031 -LMKSENRGLCTSPPGFDAEHVEQNSEIKQVHDQDVGQMLHKASPSFCSQEMDKHLDSKG 1089
+K + GL +S E VE N E +V ++ G +A+P +E + G
Sbjct: 1037 GAIKDTSAGLDSSVTKGKVEPVEGNLENSEVKERYSGL---RATPGLSPKEAEDLERPNG 1093
Query: 1090 SKLXXXXXXXXX--XXXXXXXXXXXMSVAALSDADAKVEFDLNEGLNADDGNCGEFNSIT 1147
K + +A S+ DA+VEFDLNEG + DD G+ N+ +
Sbjct: 1094 PKTSDADGDEAGECTSAARDASSVSAAASAGSEMDARVEFDLNEGFDGDDAKHGDSNNFS 1153
Query: 1148 SSGCAPSVRL--ISPVPFPASSVSCGIPASVTVTAAAKGPFLPPEDLLRSKGELGWKGSA 1205
S L + +PFP + VS G AS+TV AAAKGPF+PPEDLLR+KG +GW+GSA
Sbjct: 1154 GSVFLTPTPLQPVKTLPFPVAPVSSGTRASITVAAAAKGPFVPPEDLLRNKGAVGWRGSA 1213
Query: 1206 ATSAFRPAEPRKVTEMPLGALTTAISDVAD--GRQRRPPLDIDLNVPDERTPDDVSSQNC 1263
ATSAFRPAEPRK ++ L T+ SD + G+Q R LD DLNVPDER +D++SQ
Sbjct: 1214 ATSAFRPAEPRKPQDVLLSINNTSTSDASTSAGKQTRTFLDFDLNVPDERVLEDLASQRS 1273
Query: 1264 AHHTDAVSLAANGPDPVCNKMVSTV--RYTGGMDLDLNQVDEASDVGYCSTSSGHKIDMR 1321
+ T+ S N D V + ++ + +GG+DLDLN+VD+++D+ + +S H++D
Sbjct: 1274 GNPTNCTSDITNSFDQVRSGVMGSALDHSSGGLDLDLNKVDDSTDMISYTMNSSHRLD-- 1331
Query: 1322 ASLMPVK-PSLVGPPNREMSVHRDFDLNNGPSLDEVTAEPSL-LSQLARSSFPSQPPVSE 1379
+S VK PS G RDFDLN+GP D+ EPS+ L+Q +RS PSQP +S
Sbjct: 1332 SSFQQVKLPSTGG--------RRDFDLNDGPVGDDAAVEPSMVLNQHSRSGLPSQPSLSG 1383
Query: 1380 LSVSTAEPGNFSSWLPSNGNTYSAVTISSIMPDRGDQPFAIVAPNGSHRFLNPASGSNQF 1439
+ V+ +FS+W P+ N YSAV++ IMP+RGDQPF ++A G R L P +G + F
Sbjct: 1384 IRVNGENMASFSTWFPA-ANAYSAVSMPPIMPERGDQPFPMIATRGPQRMLGPTTGVSSF 1442
Query: 1440 GPDVYRGPVF-SSPAVSYPSAPFEYPVFPFNSSFPLPSASISAGSTAYVYPTSSNRLCFP 1498
P+ YRGPV SSPA+ + S F+YPVFPF +SFP+ SA+ STA++ +SS R CFP
Sbjct: 1443 TPEGYRGPVLSSSPAMPFQSTTFQYPVFPFGNSFPVTSANFPGASTAHMDSSSSGRACFP 1502
Query: 1499 AVSSQLMGHASTVSSHFPRPYVVGFPD-GSNSSSAETSRKWPRQGLDLNAGPGGSDLEGR 1557
V+SQ++G V S++PRPY+VG P+ GSN + KW R GLDLN+GPGG + EGR
Sbjct: 1503 GVNSQILGPGVPVPSNYPRPYIVGLPNGGSNGGVLDNGAKWFRSGLDLNSGPGGHETEGR 1562
Query: 1558 DEILPLPSRQLPVASSHALAEEHARI-QLAGSVCKRKESDGGWDGYKRSSWQ 1608
DE L +RQL ++S L E+ AR+ Q++G V KRKE +GGWDGY++SSWQ
Sbjct: 1563 DEST-LVARQLSSSASLPLKEDQARMYQMSGGVLKRKEPEGGWDGYRQSSWQ 1613
>AT3G48060.1 | Symbols: | BAH domain ;TFIIS helical bundle-like
domain | chr3:17743234-17748372 REVERSE LENGTH=1611
Length = 1611
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/1612 (44%), Positives = 953/1612 (59%), Gaps = 85/1612 (5%)
Query: 32 KDGRKISIGECALFKSSQGCPPFIGIIHCXXXXXXXXXXXXVNWLYRPIEVELSKGVPLE 91
KDGRKIS+G+CALFK Q CPPFIGII VNWLYRP E++L KG+ LE
Sbjct: 46 KDGRKISVGDCALFKPPQDCPPFIGIIRLIIAEEEDKLKLGVNWLYRPTELKLGKGILLE 105
Query: 92 AAPNKIFYSFHRDEINAELLLHPCKVAFLPKGAELPSGISSFVCRRVYDVANKCLWWLND 151
A PN++FYSFH D I A LLHPCKVAFLP+G ELPSGISSFVCRRVYDV N+ LWWL D
Sbjct: 106 AEPNELFYSFHEDNIPAASLLHPCKVAFLPRGVELPSGISSFVCRRVYDVTNERLWWLTD 165
Query: 152 QGHINDCQ-EVHELLNRTCVEMHATVQSDGRXXXXXXXXXXXXQLKSVSDGVQNSASFSS 210
Q +I+D Q EV +LL +T EMH T+Q GR DG+QN+ S S
Sbjct: 166 QDYIDDRQLEVDKLLCKTRSEMHTTLQQGGRSPKSMNSPTTSQP----KDGIQNNNSLFS 221
Query: 211 HVKGRKRERVDQGSEPVKRERSGKVEDGDSGNFRPDNILKTEISKITENGGLVDSEGVEK 270
KGRKRER+D GSE VKRERS +V+D SG R ++ L +EI K TE GGLVDSEGVEK
Sbjct: 222 QSKGRKRERMDHGSESVKRERSSRVDDSGSGPLRTESGLTSEILKFTEKGGLVDSEGVEK 281
Query: 271 LVQLMVPDKIEKQIDLACRSLLAAVIAATDKVNCLSQFVQLRGLPVFDEWLQEVHKGKIG 330
LVQLM+P++ EK+IDL R++LA +AAT++ +CLS+FVQLRGLPVFDEWLQEVHKGK+G
Sbjct: 282 LVQLMLPERNEKKIDLVGRAILAGFVAATNRFDCLSRFVQLRGLPVFDEWLQEVHKGKVG 341
Query: 331 DGIGSREGDKSVEEFLLVLLRALYKLPVNLQALKMCNIGKSVNHLRTHKNTEIQKKARGL 390
DG ++ D+ V++FLLVLLRAL KLPVNL AL+ CNIGKSVNHLR+HKN+EI KKAR L
Sbjct: 342 DGGSPKDSDRLVDDFLLVLLRALDKLPVNLNALQTCNIGKSVNHLRSHKNSEIGKKARSL 401
Query: 391 VDTWKKRVEAEMKSNDAKYRPTVSWPAKPRLPDVGQGGNRNSGASSDVAMKSSVTQHSVS 450
VDTWKKRVEAEM + + VSWP + + GG R+SG S++ A K+S + S
Sbjct: 402 VDTWKKRVEAEMDAKSGSNQ-GVSWPGR-----LSHGG-RHSGGSAE-ANKTSSSHLHAS 453
Query: 451 KTASVKIALGENTTRTASTSAFPDLAKSVLSPASATTNLKDGQPRVGSMSGGSDHPMTNA 510
K+ SVK + EN + +TS P +S SP S KDGQ R + +GG +
Sbjct: 454 KSVSVKQQV-ENNLKCVATS--PGSTRSAPSPGSGGNVSKDGQQR-NAGAGGVSEVLAAV 509
Query: 511 RDEKXXXXXXXXXXXXX-XGDHAKTAGLSGKEDARSSTAMSA-NKLSGGSSRHRKSTNGL 568
+DEK +HAKT L GKEDARSSTA S K SGGSSRHRKS N
Sbjct: 510 KDEKSSSSSQSHNNSQSCSSEHAKTGNLCGKEDARSSTAGSTLKKCSGGSSRHRKSNNVF 569
Query: 569 SGSAPSGGKRETGSCRNSSLHKSSTSEKISQSRLM-EKTLDETSIEGNTPKLIVKISNHG 627
GS+ S R G R+ S H++ SEKISQS L EKTL+ EG+ KLIVK+ G
Sbjct: 570 QGSSSSASPRGAGLSRSFSSHRNVPSEKISQSSLTSEKTLEVPLTEGSGNKLIVKLP-RG 628
Query: 628 RGPAQRANVGSFEDPAIMNSRASSPVLSEKQDQFDHSSKEKNDFHQANIGSDIHTESWQS 687
R PAQ + GS EDPA +NSR SSPV + KQ+ D++ +EKN ++A++ S ++ ESWQS
Sbjct: 629 RSPAQSVSGGSLEDPAPVNSRVSSPVHTVKQELCDNNWREKNHSYRADVSSVLNAESWQS 688
Query: 688 NDFKDVLTGSDEGDGSPTAVTDVERCRTGDDCKKTLEVSKTASSSSGNENKDRNLQDASY 747
N+ KD+LTGS E GSP V ER D K K A+SS GNE K +
Sbjct: 689 NELKDILTGSQEATGSPLVVAGDEREGALKDSDKASGNVK-ATSSLGNEFKSGERHGGTL 747
Query: 748 SSINALIEG-VKYSE-------ADDIGMNLLASVAAGEISKSELLTAAGSPERNTATAEL 799
SS+NALIE V+YSE +DD+GMNLLASVAA E+SKS + + + S N+ E
Sbjct: 748 SSMNALIESCVRYSETNASLAGSDDVGMNLLASVAADEMSKSPVASPSVSQPPNSLMNEN 807
Query: 800 SCTANGVVKSSEENLVQDECQSNTGLGTEQRNQGSISGDSRMYDGNADFRASEGKASRGL 859
S N + + L + Q+ + ++ + +S + + G +
Sbjct: 808 STVGNNTKLMASDGLPHKQHQAVRPTLSNEQGEQHVSSSGTQLESEIKNESKTGDRVKS- 866
Query: 860 LNACSMDCQ----QVTESNLEIKGKLYENPISTKLGGLPESTVQEARDGDSSEKMQEDSV 915
N+ + D Q Q ESN G + P+ TK+ + E+ + ++ G+ + +
Sbjct: 867 SNSDTEDLQRFVDQRLESNENSDGVVASPPLPTKV--IKENILDDSDSGEVKDIKTDVKS 924
Query: 916 QGEITSEXXXXXXXXXXXXXXETIEKLSCPSVDVNSNKCTAEGSSGGEQTAQKPPAILEQ 975
+ + TS+ + + K+ VD + + T ++ +KPP L
Sbjct: 925 EADCTSDLTKRVASSMLTECRD-VSKM----VDSVAVEHTPLEGVDDDKKEEKPPTAL-S 978
Query: 976 SDSARGTKENAIHSCGVDKVPDDHNVQE--YEKTDDMASENHASQSKKQRVGGESDT--- 1030
S+ + +E+ S G+ + D ++ E +++A NH Q +++ + DT
Sbjct: 979 SELVKKVEEDVPVSSGISRGMDAVSIDRPITEMVNNIAF-NHMDQKDIKKIKQDFDTSVG 1037
Query: 1031 LMKSENRGLCTSPPGFDAEHVEQNSEIKQVHDQDVGQMLHKASPSFCSQEMD-------- 1082
+K + GL +S E VE N E ++ ++ G +A+P +E +
Sbjct: 1038 AVKDASAGLDSSVTKGKVEPVEGNLENIEIMERYSGL---RATPGLSPKEAEDLKRPNAP 1094
Query: 1083 KHLDSKGSKLXXXXXXXXXXXXXXXXXXXXMSVAALSDADAKVEFDLNEGLNADDGNCGE 1142
K D+ G + S +A S+ DA+VEFDLNEG + DD G+
Sbjct: 1095 KTSDADGDE----AGECTSAARDASSVSAAASASAGSEMDARVEFDLNEGFDGDDAQHGD 1150
Query: 1143 FNSITSSGCAPSVRL--ISPVPFPASSVSCGIPASVTVTAAAKGPFLPPEDLLRSKGELG 1200
N+ + S L ++ +PFP + VS GIPAS+TV AA KGPF+PPEDLLR KG +G
Sbjct: 1151 SNNFSGSVVLTPTPLQPVNTLPFPVAPVSSGIPASITVAAAVKGPFVPPEDLLRYKGAVG 1210
Query: 1201 WKGSAATSAFRPAEPRKVTEMPLGALTTAISDVAD--GRQRRPPLDIDLNVPDERTPDDV 1258
W+GSAATSAFRPAEPRK ++ L T+ SD + G+Q R LD DLNVPDER +D+
Sbjct: 1211 WRGSAATSAFRPAEPRKAQDVLLSINNTSTSDASTSAGKQTRTFLDFDLNVPDERVLEDL 1270
Query: 1259 SSQNCAHHTDAVSLAANGPDPVCNKMVSTVRYTGGMDLDLNQVDEASDVGYCSTSSGHKI 1318
+SQ + T+ S N D V + ++ + LDLN+VD+ +D+ + +S H++
Sbjct: 1271 ASQRSGNPTNCTSGITNNFDQVRSGVMGSALDHSSGGLDLNKVDDLTDMNSYTMNSSHRL 1330
Query: 1319 DMRASLMPVK-PSLVGPPNREMSVHRDFDLNNGPSLDEVTAEPSL-LSQLARSSFPSQPP 1376
D +S VK PS G RDFDLN+GP D+ EPS+ L+Q +RS PSQP
Sbjct: 1331 D--SSFQQVKLPSTGG--------RRDFDLNDGPVGDDAAVEPSMVLNQHSRSGLPSQPS 1380
Query: 1377 VSELSVSTAEPGNFSSWLPSNGNTYSAVTISSIMPDRGDQPFAIVAPNGSHRFLNPASGS 1436
+S + V+ +FS+W P+ N YSAV++ IMP+RGDQPF ++A G R L P +G
Sbjct: 1381 LSGIRVNGENMASFSTWFPA-ANAYSAVSMPPIMPERGDQPFPMIATRGPQRMLGPTTGV 1439
Query: 1437 NQFGPDVYRGPVF-SSPAVSYPSAPFEYPVFPFNSSFPLPSASISAGSTAYVYPTSSNRL 1495
+ F P+ YRGPV SSPA+ + S F+YPVFPF +SFP+ A+ STA++ +SS R
Sbjct: 1440 SSFSPEGYRGPVLSSSPAMPFQSTTFQYPVFPFGNSFPVTPANFPGASTAHMDSSSSGRA 1499
Query: 1496 CFPAVSSQLMGHASTVSSHFPRPYVVGFPD-GSNSSSAETSRKWPRQGLDLNAGPGGSDL 1554
FP V+SQ++G V S++PRPY+VG P+ GSN + S KW R GLDLN+GPGG +
Sbjct: 1500 YFPGVNSQILGPGVPVPSNYPRPYIVGLPNGGSNGGVLDNSAKWFRSGLDLNSGPGGHET 1559
Query: 1555 EGRDEILPLPSRQLPVASSHALAEEHARI-QLAGSVCKRKESDGGWDGYKRS 1605
EGRDE L SRQL ++S E+ AR+ Q++G V KRKE +GGWDGY++S
Sbjct: 1560 EGRDEST-LVSRQLSSSASVPSKEDQARMYQMSGGVLKRKEPEGGWDGYRQS 1610
>AT4G11560.1 | Symbols: | bromo-adjacent homology (BAH)
domain-containing protein | chr4:7000095-7003445 REVERSE
LENGTH=587
Length = 587
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 53 PFIGIIHCXXXXXXXXXXXXVNWLYRPIEVELSKGVPLEAAPNK-IFYSFHRDEINAELL 111
P++ II W YRP E E G +++ + +FYSFHRDE+ AE +
Sbjct: 148 PYVAIIKDITQTKDGSMMILGQWFYRPEEAEKRGGGNWQSSDTRELFYSFHRDEVPAESV 207
Query: 112 LHPCKVAFLPKGAELPSGISS--FVCRRVYDVANKCLWWLNDQGHINDCQ-EVHELLNRT 168
+H C V F+P +LP ++ F+ R+VYD K LW L D+ + + Q E+ L+ +T
Sbjct: 208 MHRCVVYFVPAHKQLPKRKNNPGFIVRKVYDTVEKKLWKLTDKDYEDSKQREIDVLVKKT 267
>AT4G24200.1 | Symbols: | Transcription elongation factor (TFIIS)
family protein | chr4:12556927-12559929 REVERSE
LENGTH=1000
Length = 1000
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 261 GLVDSEGVEKLVQLMVPDK--IEKQIDLACR--SLLAAVIAATDKVNCLSQFVQLRGLPV 316
GL + VE+LV +M +K + K A R + +A+ IAAT +CL FV L GL
Sbjct: 15 GLTVTSRVEELVSVMQSNKDSVLKNSGDAFRQWTAVASTIAATKNRDCLDVFVNLDGLVY 74
Query: 317 FDEWLQEVHKGKIGDGIGSREGDKSVEEFLLVLLRALYKLPVNLQALKMCNIGKSVNHLR 376
WL E + + D+SVEE +L LL A+ L V+ L + +V L
Sbjct: 75 LSSWLAEAQM------LDNDSVDRSVEESILALLEAVENLGVDSSKLVSSGLWVAVKKLV 128
Query: 377 THKNTEIQKKARGLVDTWKKRVEAEMKSNDAK 408
H ++ +Q +AR L +WK + + + +D++
Sbjct: 129 DHGSSRVQDQARKLFGSWKDKDDYDHSEHDSE 160
>AT2G25120.1 | Symbols: | Bromo-adjacent homology (BAH)
domain-containing protein | chr2:10689934-10691569
FORWARD LENGTH=380
Length = 380
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 73 VNWLYRPIEVELSKGVPLEAAPNK-IFYSFHRDEINAELLLHPCKVAFLPKGAELPSGIS 131
V+W YRP +V+ E+ ++ +FYSFHRDE+ AE + H C V F+P+ ++P+
Sbjct: 134 VHWFYRPEDVDKKHVGKWESKDSRNLFYSFHRDEVFAESVKHKCVVNFVPENKQIPNRRE 193
Query: 132 --SFVCRRVYDVANKCLWWLNDQG-HINDCQEVHELLNRTCVEM 172
F+ + VYD K + D+ ++ E+ L+ +T + +
Sbjct: 194 HPCFIVQNVYDFVKKKVRKFTDKNFDVHQKNEIDRLVAKTSLRL 237
>AT4G23120.1 | Symbols: | Bromo-adjacent homology (BAH)
domain-containing protein | chr4:12113308-12115523
FORWARD LENGTH=360
Length = 360
Score = 51.6 bits (122), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/141 (30%), Positives = 59/141 (41%), Gaps = 6/141 (4%)
Query: 28 KAFYKDGRKISIGECALFKSSQGCPPFIGIIH-CXXXXXXXXXXXXVNWLYRPIEVELSK 86
K F K + + L G P++ II V WLYRP EVE
Sbjct: 50 KTFQFHANKYGLEDSVLLVPEDGEKPYVAIIKDIYTQRKEGHVKLEVQWLYRPEEVEKKY 109
Query: 87 -GVPLEAAPNKIFYSFHRDEINAELLLHPCKVAFLPKGAELPSGIS--SFVCRRVYDVAN 143
G +FYSFHRDE+ AE + C V F+ + ++P+ F+ + VYD
Sbjct: 110 VGNWKSKGSRDLFYSFHRDEVFAESVKDDCIVHFVQENKQIPNRRKHPGFIVQHVYDNVK 169
Query: 144 KCLWWLNDQGHINDCQEVHEL 164
K L L G D Q+ E+
Sbjct: 170 KKLRKLTFNGF--DLQQKREI 188