Miyakogusa Predicted Gene

Lj1g3v0049850.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr1
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JB00_SOYBN 1202 73.3 81.1 (tr|I1JB00) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT5G44750.1 847 54.6 68.3 | Symbols: REV1, ATREV1 | DNA-directed DNA polymerases | chr5:18052669-18059581 FORWARD LENGTH=1101
Medicago Medtr5g004960.3 1174 72.7 80.9 | DNA repair protein REV1 | HC | chr5:222979-208176 | 20130731
Soybean Glyma01g45490.1 1188 73.9 81.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj1g3v0049850.1 length: 850 aa.
IPR001126 DNA-repair protein, UmuC-like
method AccNumber shortName E-value location
Molecular Function GO:0003684 damaged DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006281 DNA repair    
HMMPfam PF00817 IMS 9.9e-43 368-514
IPR001357 BRCT domain
Gene3D G3DSA:3.40.50.10190 no description 3.6e-15 90-183
HMMPfam PF00533 BRCT 5.1e-06 89-165
HMMSmart SM00292 breast 1.5e-11 89-168
ProfileScan PS50172 BRCT 20.462 87-178
superfamily SSF52113 BRCT 4.1e-22 44-180
IPR012112 DNA repair protein, Rev1
Molecular Function GO:0000287 magnesium ion binding    
Molecular Function GO:0003684 damaged DNA binding    
Biological Process GO:0006281 DNA repair    
Molecular Function GO:0016779 nucleotidyltransferase activity    
HMMPIR PIRSF036573 DNA 3.9e-103 2-844
IPR017961 DNA polymerase, Y-family, little finger domain
Molecular Function GO:0003684 damaged DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006281 DNA repair    
Gene3D G3DSA:3.30.1490.100 no description 8.4e-17 603-723
HMMPfam PF11799 IMS_C 1.9e-14 571-709
superfamily SSF100879 Lesion 1.5e-17 600-715
IPR017963 DNA-repair protein, UmuC-like, N-terminal
Molecular Function GO:0003684 damaged DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006281 DNA repair    
ProfileScan PS50173 UMUC 55.316 365-546
IPR022880 DNA polymerase IV
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
HAMAP MF_01113 DNApol_IV 27.959 362-729
no_ID  
Gene3D G3DSA:1.10.150.20 no description 3.7e-22 526-596
Gene3D G3DSA:3.30.70.270 no description 1.8e-26 429-524
HMMPanther PTHR11076 DNA 7.8e-267 52-819
HMMPanther PTHR11076:SF13 TERMINAL 7.8e-267 52-819
Seg seg seg NA 5-29
34-44
78-87
352-366
superfamily SSF56672 DNA/RNA 2.7e-80 363-597
Wolf-PSORT
Lj1g3v0049850.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj1g3v0049850.1