Miyakogusa Predicted Gene

Lj0g3v0336229.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1JLB0_SOYBN 993 65.5 73.7 (tr|I1JLB0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G45616.1 344 34.0 49.8 | Symbols: AtRLP6, RLP6 | receptor like protein 6 | chr1:17183550-17186534 REVERSE LENGTH=994
Medicago Medtr4g017640.1 1047 68.6 79.3 | verticillium wilt resistance-like protein | HC | chr4:5537986-5541955 | 20130731
Soybean Glyma03g07240.1 985 68.8 77.2  
LJGI gnl|LJGI|TC76701 167 94.4 94.4 weakly similar to UniRef100_A7QKY8 Cluster: Chromosome chr8 scaffold_115, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_115, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0336229.1 length: 802 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.74 331-351
356-373
669-687
ProfileScan PS51450 LRR 4.893 103-125
235-256
355-377
378-400
404-427
428-449
452-474
501-522
551-573
528-549
575-597
599-620
669-690
694-716
718-739
742-761
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 1.5e+02 101-124
233-256
353-377
426-447
499-532
573-599
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 1.5e-08 32-73
no_ID  
FPrintScan PR00019 LEURICHRPT 1.7e-05 379-392
499-512
Gene3D G3DSA:3.80.10.10 no description 1.4e-55 62-294
295-531
532-781
HMMPanther PTHR24420 FAMILY 9.2e-102 82-781
HMMPanther PTHR24420:SF480SUBFAMILY NOT 9.2e-102 82-781
HMMPfam PF13504 LRR_7 2.2 259-272
HMMPfam PF13855 LRR_8 6.7e-11 378-438
527-586
719-776
HMMSmart SM00365 Leucine-rich 1.8e+02 376-404
499-520
573-595
740-759
Seg seg seg NA 3-13
34-49
451-464
510-521
superfamily SSF52047 RNI-like 1.2e-61 201-513
superfamily SSF52058 L 4.7e-34 518-787
55-271
Putative transmembrane regions
  From To
TM segments
SOSUI		 6 28
Wolf-PSORT
Lj0g3v0336229.1	vacu 6, extr 3, E.R._vacu 3, chlo 2, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0336229.1