Miyakogusa Predicted Gene

Lj0g3v0300039.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7K633_SOYBN 1467 77.7 84.7 (tr|K7K633) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G24190.1 941 56.9 68.2 | Symbols: SIN3, ATSIN3, SNL3 | SIN3-like 3 | chr1:8563858-8569927 REVERSE LENGTH=1330
Medicago Medtr5g036670.1 1380 73.4 82.1 | paired amphipathic helix SIN3-like protein | HC | chr5:16035547-16020987 | 20130731
Soybean Glyma01g04490.3 1306 69.6 75.7  
LJGI gnl|LJGI|TC82605 1816 99.7 99.7 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0300039.1 length: 1013 aa.
IPR013194 Histone deacetylase interacting
method AccNumber shortName E-value location
HMMPfam PF08295 Sin3_corepress 6.5e-40 67-160
HMMSmart SM00761 Histone 2.7e-55 67-167
no_ID  
Coil coil coiled-coil NA 961-962
HMMPanther PTHR12346 SIN3B-RELATED 9.3e-252 52-961
Seg seg seg NA 5-18
22-32
513-528
532-543
652-665
961-980
981-1013
Wolf-PSORT
Lj0g3v0300039.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0300039.1