Miyakogusa Predicted Gene
- Lj0g3v0300039.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0300039.1 tr|D9ZJF7|D9ZJF7_MALDO WRKY domain class
transcription factor OS=Malus domestica GN=WRKY2 PE=2
SV=1,70.25,0,Histone deacetylase (HDAC) interacting,Histone
deacetylase interacting; SIN3B-RELATED,NULL;
Sin3_cor,NODE_5336_length_3266_cov_100.270363.path2.1
(3039 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82605 similar to UniRef100_A7Q2L0 Cluster: Chromosome... 1816 0.0
gnl|LJGI|TC71048 similar to UniRef100_A7Q2L0 Cluster: Chromosome... 837 0.0
gnl|LJGI|AV415593 similar to UniRef100_Q0JRB9 Cluster: Os01g0109... 821 0.0
gnl|LJGI|BW600158 similar to UniRef100_A7Q2L0 Cluster: Chromosom... 248 2e-64
gnl|LJGI|TC61778 similar to UniRef100_A7Q2L0 Cluster: Chromosome... 151 3e-35
gnl|LJGI|FS338331 similar to UniRef100_A7Q2L0 Cluster: Chromosom... 135 2e-30
gnl|LJGI|TC79665 similar to UniRef100_A7PMK0 Cluster: Chromosome... 58 3e-07
>gnl|LJGI|TC82605 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 932
Score = 1816 bits (916), Expect = 0.0
Identities = 929/932 (99%), Gaps = 1/932 (0%)
Strand = Plus / Plus
Query: 884 tggagtttcattatcctgatctagacattcatgaagatttgtatcagctcgtaaaatatt 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggagtttcattatcctgatctagacattcatgaagatttgtatcagctcgtaaaatatt 60
Query: 944 catgtggggaactttgcacagctgaacagttggataaagttatgaaggtttggacaactt 1003
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgtggggaactttgcacagctgaacagttggataaagttatgaaggtttggacaactt 120
Query: 1004 ttttagaacccatgctctgtgttccttctcgggcccagggtgccgatgatacagaagatg 1063
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 121 ttttagaacccatgctctgtgttccttctcgggcccagggtgccgaggatacagaagatg 180
Query: 1064 ttgtcaaggctaagaatacagaagatgttgtcaatactgagaataattctgtcaaaagtg 1123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgtcaaggctaagaatacagaagatgttgtcaatactgagaataattctgtcaaaagtg 240
Query: 1124 gcattgtgagtgttgctgaaagtggtggtaatcctggtgttggtgctatcacaatgaacc 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gcattgtgagtgttgctgaaagtggtggtaatcctggtgttggtgctatcacaatgaacc 300
Query: 1184 caaagcatatgagtacttctagaaatgggagtgagtgtatgccattagatcagtcagatt 1243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaagcatatgagtacttctagaaatgggagtgagtgtatgccattagatcagtcagatt 360
Query: 1244 ctaaagcttggcaattaaatggtgatagtggggttagagaagatagatgtctagattcgg 1303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctaaagcttggcaattaaatggtgatagtggggttagagaagatagatgtctagattcgg 420
Query: 1304 accatactgtgtataaaactgaaactgcgggcaataatacacaacatggtaaaacgaata 1363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 accatactgtgtataaaactgaaactgcgggcaataatacacaacatggtaaaacgaata 480
Query: 1364 ttattg-gattcacacccgatgaactatcaggggtcaataagcaaaaccagtccagtgag 1422
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ttattgccattcacacccgatgaactatcaggggtcaataagcaaaaccagtccagtgag 540
Query: 1423 cggttagtgaatgctaatgtctcaccagcatctggaatggagcaaagtaatggaaggaca 1482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cggttagtgaatgctaatgtctcaccagcatctggaatggagcaaagtaatggaaggaca 600
Query: 1483 aaaatagataatacatcaggacacactgctactccatctggaaatggtaatacttctgtc 1542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aaaatagataatacatcaggacacactgctactccatctggaaatggtaatacttctgtc 660
Query: 1543 gagggaggacttgaattaccttcatcagagggtggtgattccacaagaccaggtacattc 1602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gagggaggacttgaattaccttcatcagagggtggtgattccacaagaccaggtacattc 720
Query: 1603 acaaatggggccaccactggaggcaccgaagttcacagataccaagagcaatcaattcga 1662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 acaaatggggccaccactggaggcaccgaagttcacagataccaagagcaatcaattcga 780
Query: 1663 cacttcaaaagtgaaagagaagagggcgagttatctccaaatggagacatggaagaggat 1722
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cacttcaaaagtgaaagagaagagggcgagttatctccaaatggagacatggaagaggat 840
Query: 1723 aactttgcagtttatgaaaattccggattggatgcagggcataaaggaaagggtggtgat 1782
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aactttgcagtttatgaaaattccggattggatgcagggcataaaggaaagggtggtgat 900
Query: 1783 atgagtcaaaaataccaaagtagacacgggga 1814
||||||||||||||||||||||||||||||||
Sbjct: 901 atgagtcaaaaataccaaagtagacacgggga 932
>gnl|LJGI|TC71048 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 892
Score = 837 bits (422), Expect = 0.0
Identities = 422/422 (100%)
Strand = Plus / Plus
Query: 2464 gaggagatggataataaacttctccaattatatgcgtatgagaagtcaagaaaactagga 2523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaggagatggataataaacttctccaattatatgcgtatgagaagtcaagaaaactagga 60
Query: 2524 aagtttatcgatatagtttatcatgaaaatgcatgtgttattcttcatgaagagaacata 2583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtttatcgatatagtttatcatgaaaatgcatgtgttattcttcatgaagagaacata 120
Query: 2584 tatcgtattgaatattcacctggaccaaagaaactttctattcaactgatggactgtgga 2643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tatcgtattgaatattcacctggaccaaagaaactttctattcaactgatggactgtgga 180
Query: 2644 catgataagcctgaagtgacagctgtgtcagtcgaccctaaattttctacctatctgcac 2703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catgataagcctgaagtgacagctgtgtcagtcgaccctaaattttctacctatctgcac 240
Query: 2704 aatgactttctctctgtggtccctgacaaaaaggaaaaatcacggcttttcttgaagagg 2763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aatgactttctctctgtggtccctgacaaaaaggaaaaatcacggcttttcttgaagagg 300
Query: 2764 aataaacatagatatgccggtagtagtgaattttcaagccaggctatggaaggactacaa 2823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aataaacatagatatgccggtagtagtgaattttcaagccaggctatggaaggactacaa 360
Query: 2824 gtttttaatggtctggagtgtaagatagcttgcagttcttctaaggtgtcatatgtttta 2883
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtttttaatggtctggagtgtaagatagcttgcagttcttctaaggtgtcatatgtttta 420
Query: 2884 ga 2885
||
Sbjct: 421 ga 422
>gnl|LJGI|AV415593 similar to UniRef100_Q0JRB9 Cluster: Os01g0109700 protein; n=3; Oryza
sativa Japonica Group|Rep: Os01g0109700 protein - Oryza
sativa subsp. japonica (Rice), partial (9%)
Length = 416
Score = 821 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 1873 gaaagtcctcacaggtcatcagatgacagtgaaaatgcttctgaaaatgttgatgtttct 1932
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gaaagtcctcacaggtcatcagatgacagtgaaaatgcttctgaaaatgttgatgtttct 62
Query: 1933 ggaagtgagtctgctgatggggaggagtgctctcgagaagagcatgaggacagggaacat 1992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ggaagtgagtctgctgatggggaggagtgctctcgagaagagcatgaggacagggaacat 122
Query: 1993 gataataaggctgagagtgaaggtgaagctgaaggaatggttgatgcccatgatgttgaa 2052
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gataataaggctgagagtgaaggtgaagctgaaggaatggttgatgcccatgatgttgaa 182
Query: 2053 ggagatggaatgtcattaacaatttctgaacgctttctacaaactgtgaagcctttggca 2112
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 ggagatggaatgtcattaacaatttctgaacgctttctacaaactgtgaagcctttggca 242
Query: 2113 aagtatgttcctgccgcgttacatgagaaagacaggaattctcaagttttttatggaagt 2172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aagtatgttcctgccgcgttacatgagaaagacaggaattctcaagttttttatggaagt 302
Query: 2173 gattccttttatgttctgttcagacttcatcagacattgtatgagaggatacaatcagca 2232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 gattccttttatgttctgttcagacttcatcagacattgtatgagaggatacaatcagca 362
Query: 2233 aagtttaactcatcatctgccgaaaagaaatggaaggcttcacatgatacaggc 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aagtttaactcatcatctgccgaaaagaaatggaaggcttcacatgatacaggc 416
>gnl|LJGI|BW600158 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 436
Score = 248 bits (125), Expect = 2e-64
Identities = 353/429 (82%)
Strand = Plus / Plus
Query: 2342 cttctgataatacaaaatttgaagatgattgtcgagctattattggaacccagtcatatc 2401
|||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||
Sbjct: 1 cttctgataatacaaaatttgaagatgactgtcgagctattattggaattcagtcgtacg 60
Query: 2402 tcttgttcacactagacaagctgatatacaaattagtaaagcagcttcaagctatagcca 2461
|||| |||||| |||||||||||||||| ||| | || || |||||||||||| | ||||
Sbjct: 61 tcttattcacattagacaagctgatatataaacttgttaaacagcttcaagctgttgcca 120
Query: 2462 gtgaggagatggataataaacttctccaattatatgcgtatgagaagtcaagaaaactag 2521
|||| ||||||||||| || ||||| ||| ||| | | |||||| | |||||||||| |
Sbjct: 121 gtgatgagatggataacaagcttcttcaactatttacatatgagcaatcaagaaaacctg 180
Query: 2522 gaaagtttatcgatatagtttatcatgaaaatgcatgtgttattcttcatgaagagaaca 2581
|||| ||| | ||| | ||||||||||||||||| ||||| |||||| ||| || ||||
Sbjct: 181 gaaaatttgttgatttggtttatcatgaaaatgcgcgtgttcttcttcctgatgaaaaca 240
Query: 2582 tatatcgtattgaatattcacctggaccaaagaaactttctattcaactgatggactgtg 2641
||||||||||||||| |||| ||| ||| | | | ||||||||||| ||| || ||
Sbjct: 241 tatatcgtattgaatgttcagctgcacctacccgattgtctattcaactcatgcgctatg 300
Query: 2642 gacatgataagcctgaagtgacagctgtgtcagtcgaccctaaattttctacctatctgc 2701
|||||||||| ||||||||| | || || || | || ||||| ||||| | |||||||
Sbjct: 301 gacatgataaacctgaagtggctgccgtaacaatggatcctaatttttcagcatatctgc 360
Query: 2702 acaatgactttctctctgtggtccctgacaaaaaggaaaaatcacggcttttcttgaaga 2761
||||||| || || ||||| |||||||| ||||||||||| || | |||||||||| |
Sbjct: 361 acaatgatttcctgtctgttgtccctgataaaaaggaaaagtctggaattttcttgaaaa 420
Query: 2762 ggaataaac 2770
|||||||||
Sbjct: 421 ggaataaac 429
>gnl|LJGI|TC61778 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 1393
Score = 151 bits (76), Expect = 3e-35
Identities = 88/92 (95%)
Strand = Plus / Plus
Query: 2794 ttttcaagccaggctatggaaggactacaagtttttaatggtctggagtgtaagatagct 2853
||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct: 1068 ttttcaagctaggctatggaaggactacaaatttttaatggtctggagtgtgagatagct 1127
Query: 2854 tgcagttcttctaaggtgtcatatgttttaga 2885
||||||||||| ||||||||||||||||||||
Sbjct: 1128 tgcagttcttcgaaggtgtcatatgttttaga 1159
>gnl|LJGI|FS338331 similar to UniRef100_A7Q2L0 Cluster: Chromosome chr1 scaffold_46,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_46, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 809
Score = 135 bits (68), Expect = 2e-30
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 2806 gctatggaaggactacaagtttttaatggtctggagtgtaagatagcttgcagttcttct 2865
|||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 621 gctatggaaggactacaaatttttaatggtctggagtgtgagatagcttgcagttcttcg 680
Query: 2866 aaggtgtcatatgttttaga 2885
||||||||||||||||||||
Sbjct: 681 aaggtgtcatatgttttaga 700
>gnl|LJGI|TC79665 similar to UniRef100_A7PMK0 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 537
Score = 58.0 bits (29), Expect = 3e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 1998 taaggctgagagtgaaggtgaagctgaaggaatggttgatgccca 2042
||||||||||||||||||||||||||| || ||| |||||||||
Sbjct: 115 taaggctgagagtgaaggtgaagctgaggggatgtgtgatgccca 159