Miyakogusa Predicted Gene
- Lj0g3v0290539.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LM18_SOYBN |
665 |
77.8 |
84.7 |
(tr|I1LM18) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G06440.1 |
540 |
74.2 |
85.4 |
| Symbols: | Ubiquitin carboxyl-terminal hydrolase family protein | chr1:1963733-1964905 REVERSE LENGTH=390 |
| Medicago |
Medtr3g063230.1 |
672 |
77.5 |
85.3 |
| plant organelle RNA recognition domain protein | HC | chr3:28611519-28613057 | 20130731 |
| Soybean |
Glyma11g31850.1 |
647 |
80.8 |
87.8 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0290539.1 |
length: 416 aa. |
| IPR021099 |
Plant organelle RNA recognition domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF11955 |
PORR |
1.1e-110 |
50-387 |
| no_ID |
|
| HMMPanther |
PTHR31476 |
FAMILY |
7.1e-70 |
51-382 |
| HMMPanther |
PTHR31476:SF0 |
SUBFAMILY |
7.1e-70 |
51-382 |
| Seg |
seg |
seg |
NA |
375-389 |
- Wolf-PSORT
Lj0g3v0290539.1 chlo 7.5, chlo_mito 7, mito 5.5
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0290539.1 |
|