Miyakogusa Predicted Gene
- Lj0g3v0289679.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SL59_LOTJA |
275 |
95.7 |
96.4 |
(tr|I3SL59) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G40087.1 |
61.6 |
25.3 |
45.8 |
| Symbols: | Plant transposase (Ptta/En/Spm family) | chr1:14999762-15001868 REVERSE LENGTH=390 |
| Medicago |
Medtr6g043310.1 |
131 |
49.0 |
67.3 |
| hypothetical protein | HC | chr6:14988154-14988701 | 20130731 |
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|TC61725 |
932 |
97.9 |
97.9 |
similar to UniRef100_A0LSH8 Cluster: Glycoside hydrolase, family 6 precursor; n=1; Acidothermus cellulolyticus 11B|Rep: Glycoside hydrolase, family 6 precursor - Acidothermus cellulolyticus (strain ATCC 43068 / 11B), partial (3%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0289679.2 |
length: 232 aa. |
| IPR004252 |
Transposase, Ptta/En/Spm, plant |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03004 |
Transposase_24 |
2e-19 |
15-133 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
215-232 |
- Wolf-PSORT
Lj0g3v0289679.2 nucl 7.5, cyto_nucl 5, cyto 1.5, chlo 1, mito 1, plas 1, extr 1, pero 1, chlo_mito 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0289679.2 |
|