Miyakogusa Predicted Gene

Lj0g3v0269339.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M356_SOYBN 668 52.3 60.9 (tr|K7M356) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G27990.1 253 45.1 57.7 | Symbols: BLH8, PNF | BEL1-like homeodomain 8 | chr2:11921540-11923902 REVERSE LENGTH=584
Medicago Medtr2g095050.1 516 49.0 60.2 | associated with HOX protein | LC | chr2:40596681-40593726 | 20130731
Soybean Glyma11g20240.2 557 49.1 58.7  
LJGI gnl|LJGI|TC59712 60.0 86.4 86.4 homologue to UniRef100_A7NT59 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0269339.1 length: 714 aa.
IPR001356 Homeodomain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMSmart SM00389 Homeodomain 1.2e-08 501-565
ProfileScan PS50071 HOMEOBOX_2 11.693 498-561
IPR006563 POX
HMMPfam PF07526 POX 2.7e-37 275-437
HMMSmart SM00574 domain 1.3e-35 270-438
IPR008422 Homeobox KN domain
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF05920 Homeobox_KN 1.1e-16 518-557
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 1.3e-26 504-565
superfamily SSF46689 Homeodomain-like 3.3e-16 484-560
no_ID  
HMMPanther PTHR11850 HOMEOBOX 1.6e-95 374-572
HMMPanther PTHR11850:SF15 HOMEOBOX 1.6e-95 374-572
Seg seg seg NA 221-230
335-351
669-681
689-704
Wolf-PSORT
Lj0g3v0269339.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0269339.1