| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7K4H6_SOYBN | 2857 | 94.0 | 96.4 | (tr|K7K4H6) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT3G11130.1 | 2755 | 89.9 | 95.0 | | Symbols: | Clathrin, heavy chain | chr3:3482575-3491667 REVERSE LENGTH=1705 |
| Medicago | Medtr3g464720.1 | 2843 | 93.5 | 96.5 | | clathrin heavy chain | HC | chr3:26022646-26033994 | 20130731 |
| Soybean | Glyma01g38580.1 | 2857 | 94.0 | 96.4 | |
| LJGI | gnl|LJGI|TC58548 | 414 | 81.3 | 81.3 | homologue to UniRef100_Q39834 Cluster: Clathrin heavy chain; n=1; Glycine max|Rep: Clathrin heavy chain - Glycine max (Soybean), partial (16%) |
| Lj0g3v0267479.1 | length: 1516 aa. | |||
| IPR000547 | Clathrin, heavy chain/VPS, 7-fold repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0016192 | vesicle-mediated transport | ||
| HMMPfam | PF00637 | Clathrin | 6e-29 | 367-501 511-650 660-786 803-943 955-1091 1098-1241 1248-1389 |
| HMMSmart | SM00299 | Clathrin | 1.2e-42 | 361-503 510-652 657-796 803-948 952-1093 1098-1244 1247-1406 |
| IPR001473 | Clathrin, heavy chain, propeller, N-terminal | |||
| Molecular Function | GO:0005198 | structural molecule activity | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0016192 | vesicle-mediated transport | ||
| Cellular Component | GO:0030130 | clathrin coat of trans-Golgi network vesicle | ||
| Cellular Component | GO:0030132 | clathrin coat of coated pit | ||
| superfamily | SSF50989 | Clathrin | 1.6e-52 | 1-153 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 4.8e-28 | 520-749 1007-1345 1346-1466 |
| IPR015348 | Clathrin, heavy chain, linker, core motif | |||
| Molecular Function | GO:0005198 | structural molecule activity | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0016192 | vesicle-mediated transport | ||
| Cellular Component | GO:0030130 | clathrin coat of trans-Golgi network vesicle | ||
| Cellular Component | GO:0030132 | clathrin coat of coated pit | ||
| HMMPfam | PF09268 | Clathrin-link | 8.6e-10 | 154-177 |
| IPR016024 | Armadillo-type fold | |||
| Molecular Function | GO:0005488 | binding | ||
| superfamily | SSF48371 | ARM | 7.4e-20 | 1006-1341 267-603 154-310 710-859 860-1005 610-753 |
| IPR016025 | Clathrin, heavy chain, linker/propeller domain | |||
| Molecular Function | GO:0005198 | structural molecule activity | ||
| Biological Process | GO:0006886 | intracellular protein transport | ||
| Biological Process | GO:0016192 | vesicle-mediated transport | ||
| Cellular Component | GO:0030130 | clathrin coat of trans-Golgi network vesicle | ||
| Cellular Component | GO:0030132 | clathrin coat of coated pit | ||
| Gene3D | G3DSA:2.130.10.110 | no description | 2.5e-68 | 1-186 |
| IPR016341 | Clathrin, heavy chain | |||
| HMMPIR | PIRSF002290 | Clathrin | 0 | 1-1516 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 1287-1308 1427-1465 |
| HMMPanther | PTHR10292 | CLATHRIN | 0 | 1-1511 |
| HMMPanther | PTHR10292:SF1 | CLATHRIN | 0 | 1-1511 |
| HMMPfam | PF13838 | Clathrin_H_link | 1.5e-29 | 179-244 |
| Seg | seg | seg | NA | 71-84 663-672 1447-1456 1476-1514 |
| From | To | |
|---|---|---|
| TM segments SOSUI |
91 | 113 |
Lj0g3v0267479.1 chlo 5, nucl 2, cyto 2, E.R. 2, cyto_nucl 2, cyto_E.R. 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0267479.1 |