Miyakogusa Predicted Gene
- Lj0g3v0267479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0267479.1 Non Chatacterized Hit- tr|I1J8Z9|I1J8Z9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.6598
PE=,95.23,0,coiled-coil,NULL; seg,NULL; Clathrin,Clathrin, heavy
chain/VPS, 7-fold repeat; Clathrin_H_link,NULL;,CUFF.17673.1
(4551 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58548 homologue to UniRef100_Q39834 Cluster: Clathrin... 414 e-114
gnl|LJGI|TC81218 homologue to UniRef100_A7Q3K1 Cluster: Chromoso... 345 2e-93
gnl|LJGI|TC81498 homologue to UniRef100_A7Q3K1 Cluster: Chromoso... 260 7e-68
gnl|LJGI|BP066698 homologue to UniRef100_Q39834 Cluster: Clathri... 254 4e-66
gnl|LJGI|TC74428 similar to UniRef100_Q39834 Cluster: Clathrin h... 74 9e-12
gnl|LJGI|TC69258 similar to UniRef100_Q39834 Cluster: Clathrin h... 68 5e-10
gnl|LJGI|TC57991 68 5e-10
>gnl|LJGI|TC58548 homologue to UniRef100_Q39834 Cluster: Clathrin heavy chain; n=1;
Glycine max|Rep: Clathrin heavy chain - Glycine max
(Soybean), partial (16%)
Length = 825
Score = 414 bits (209), Expect = e-114
Identities = 671/825 (81%)
Strand = Plus / Plus
Query: 815 aaaattggctagcagaggataagctagaatgctgcgaggagcttggtgaccttgtgaaga 874
|||||||| | |||||||| ||||| |||||| |||||||||| || || || || ||||
Sbjct: 1 aaaattggttggcagaggacaagcttgaatgcagcgaggagctaggagatctcgttaaga 60
Query: 875 cggtggataatgaccttgcattgaaaatctacatcaaagctagagccacaccaaaagttg 934
| |||||||| || ||||| || ||||| || |||||||| ||||| || ||||||||||
Sbjct: 61 ctgtggataacgatcttgctttaaaaatttatatcaaagccagagctactccaaaagttg 120
Query: 935 ttgcagcttttgcggagaggagggaatttgacaagatcctgatatattctaagcaggttg 994
||||||||||||| ||||||||||| |||||||| || |||||||| |||||||||||||
Sbjct: 121 ttgcagcttttgctgagaggagggagtttgacaaaattctgatatactctaagcaggttg 180
Query: 995 gatacacacctgattacatgtttcttctgcaaacaattttacggacagacccacagggtg 1054
| ||||||||||| ||| | || || ||||||||||| | |||||||| || |||||||
Sbjct: 181 ggtacacacctgactacctcttcctcttgcaaacaattctccggacagatcctcagggtg 240
Query: 1055 ctgtaaattttgctctgatgatgtctcaaatggagggaggttgccccgttgactacaaca 1114
|||| |||||||| | |||||||||||||||||||||||| |||| ||||| ||||| |
Sbjct: 241 ctgttaattttgcgttaatgatgtctcaaatggagggaggtagcccagttgattacaata 300
Query: 1115 caataactgatctctttcttcagagaaatttgatccgtgaggcaacagcttttttgttgg 1174
| ||||||||||| |||||||||||||| ||||||||||||||||||||||| | |||
Sbjct: 301 ccataactgatctgtttcttcagagaaacctgatccgtgaggcaacagcttttcttctgg 360
Query: 1175 atgtgctgaagccaaatctgcctgaacatggatatcttcaaacaaaggttctggaaatta 1234
|||| | ||||||||||| || ||||| || | || || |||||||| |||| || |
Sbjct: 361 atgttttaaagccaaatctaccagaacacgggttcctgcagacaaaggtcttggagataa 420
Query: 1235 atcttgtgacgtttccaaatgttgctgatgccatattggccaatggcatgtttagtcatt 1294
|||| ||||| || || |||||||||||||| || ||||| ||||||||||| || ||||
Sbjct: 421 atctggtgacattccccaatgttgctgatgctattttggctaatggcatgttcagccatt 480
Query: 1295 atgatcgcccacgcattggacaactctgtgaaaaggcggggctgttcatacgggctcttc 1354
|||| || || || |||| |||||||||||||| || || || | | | || ||| | |
Sbjct: 481 atgaccgtcctcgtattgcccaactctgtgaaaaagctggtctttacgtgcgagctttgc 540
Query: 1355 agcattattctgagttgcctgatatcaaacgtgttattgtgaatacacatgccattgagc 1414
| ||||| | ||| | || ||||| |||||||| ||||| ||||||||||| |||||||
Sbjct: 541 aacattacacagagctaccagatataaaacgtgtgattgttaatacacatgcaattgagc 600
Query: 1415 cacaggctttagttgagttctttggaaccctttcccgagaatgggcacttgaatgtatga 1474
| ||| | | || ||||| ||||| || || || | ||||||||| | || || ||||
Sbjct: 601 ctcagtcacttgtagagttttttggcactctatctcaagaatgggctttagagtgcatga 660
Query: 1475 aagatcttttattggtcaatcttaggggcaatcttcaaataattgtgcagactgctaagg 1534
|||| || || ||| ||| |||||||| || || || || ||||||||| |||||| |
Sbjct: 661 aagacctattgctggccaaccttaggggaaacctgcagattattgtgcaggttgctaaag 720
Query: 1535 aatattctgagcagctgggagttgatgcatgtattaaactctttgagaatttcaaatcct 1594
|||| | ||| || |||| |||||||| || || ||||| |||||| | || | || |
Sbjct: 721 aatactgtgaacaattgggcgttgatgcctgcataaaactttttgagcagtttaggtcat 780
Query: 1595 atgaaggactgtactttttcttgggtgcatacttgagctccagtg 1639
|||||||||||||||||||| | || |||| |||||||||||||
Sbjct: 781 atgaaggactgtactttttccttggctcatatttgagctccagtg 825
>gnl|LJGI|TC81218 homologue to UniRef100_A7Q3K1 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 993
Score = 345 bits (174), Expect = 2e-93
Identities = 675/842 (80%)
Strand = Plus / Plus
Query: 3235 gaagtttgttttgcttgtgttgataatgaggagttccgcttagctcagatttgtggtctc 3294
|||||||| ||||||||||||||| | || ||||| || || || ||||| ||||| ||
Sbjct: 1 gaagtttgctttgcttgtgttgatgaagaagagtttcgtttggcccagatatgtggactt 60
Query: 3295 aatgtcatcattcaggtggatgatttggaggaggttagtgagtattatcagaacagagga 3354
|| | || |||||||||||||| ||||| || || ||||| ||||| || || |||||
Sbjct: 61 aacattattattcaggtggatgacttggaagaagtcagtgaatattaccaaaatagaggc 120
Query: 3355 tgcttcaatgagctcatatctctaatggagagtgggctaggattggaacgtgctcatatg 3414
|||||||||| | |||||||| ||||||||||| |||| || || || |||||||||
Sbjct: 121 cacttcaatgagttaatatctctcatggagagtggtttagggttagagcgggctcatatg 180
Query: 3415 ggtatctttactgaattgggagttctttatgcaagatatcgtgaagagaagctaatggaa 3474
|| ||||| || || || |||||| | | ||| ||||| || ||||| || |||||
Sbjct: 181 ggcatcttcaccgagttaggagttttgtttgctagataccgccctgagaaacttatggag 240
Query: 3475 cacattaagttgttctcaactaggcttaacattccaaagcttattcgggcatgtgatgaa 3534
|| || || | ||||| || | || || |||||||| || || | || |||||||||
Sbjct: 241 catatcaaactattctccacccgcctcaatattccaaaactcataagagcttgtgatgaa 300
Query: 3535 caacaacactggaaagaacttacatacttatacatccaatatgatgagtttgataatgct 3594
|||||||| |||| |||| | || || || || |||||||||||||||||||||||||||
Sbjct: 301 caacaacattggacagaattgacgtatttgtatatccaatatgatgagtttgataatgct 360
Query: 3595 gctaccactgtcatgaatcactctccagaatcttgggaccatatgcaattcaaagatatc 3654
|| ||||| ||||||| || || |||||| | ||||| || ||||||||||||||| |
Sbjct: 361 gcaaccaccatcatgaaccattcaccagaagcatgggatcacatgcaattcaaagatgtt 420
Query: 3655 atagttaaaattgccagtgtggaactctactataaggctgttcacttctacttgcaagaa 3714
|| || ||| ||| | ||| || | || |||||||||||||||||||| ||| ||||
Sbjct: 421 attgtcaaagttggaaatgttgagttgtattataaggctgttcacttctatttggaagag 480
Query: 3715 catcctgatgtaataaatgatcttctaaatgtgattgctcttcgtgtggaccatacccgt 3774
||||| ||| | || |||||| |||| ||||| |||| ||||||||||||||| | |||
Sbjct: 481 catccagatcttatcaatgatgttctgaatgtccttgcccttcgtgtggaccatgcacgt 540
Query: 3775 gtagtagatataatgaggaaggctggccacctcaaattagtcaagccgtacatggttgca 3834
|| || || || ||| | |||||||| |||||| | || ||||| ||||||||||||
Sbjct: 541 gttgttgacatcatgcgaaaggctggtcacctccgccttgtaaagccatacatggttgca 600
Query: 3835 gtccaaagcaataatgtgtttgctgtgaatgaagctctgaatgaaatatatgttgaggaa 3894
|| || ||||| ||||| | |||||| |||||||| |||| || ||||||||||||||
Sbjct: 601 gttcagagcaacaatgtatctgctgttaatgaagccttgaacgagatatatgttgaggag 660
Query: 3895 gaggactatgatagacttcgagaatcaacagatctgcatgacaatttcgatcagataggt 3954
|| || ||||||||| | || || |||| ||| ||||||| || || ||||| |||||
Sbjct: 661 gaagattatgatagattgcgtgagtcaattgatttgcatgataactttgatcaaataggc 720
Query: 3955 cttgcacagaagattgagaagcatgaacttcttgagatgaggcgtgttgctgcatacatt 4014
|| ||||| |||||||| |||||||| |||||||||||||||||||||||||| || |||
Sbjct: 721 ctcgcacaaaagattgaaaagcatgagcttcttgagatgaggcgtgttgctgcttatatt 780
Query: 4015 tataagaaagcaggaagatggaagcaatccattgctttgtcaaagaaagacaatctttac 4074
|| ||||| || || || |||||||||||||||||| |||||||||| || |||||||||
Sbjct: 781 tacaagaaggctggtaggtggaagcaatccattgctctgtcaaagaaggataatctttac 840
Query: 4075 aa 4076
||
Sbjct: 841 aa 842
>gnl|LJGI|TC81498 homologue to UniRef100_A7Q3K1 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 774
Score = 260 bits (131), Expect = 7e-68
Identities = 558/699 (79%), Gaps = 1/699 (0%)
Strand = Plus / Plus
Query: 3379 atggagagtgggctaggattggaacgtgctcatatgggtatctttactgaattgggagtt 3438
||||||||||| ||||||| ||||| || |||||||| |||||||| || || ||||||
Sbjct: 2 atggagagtggtttaggattagaacgggcacatatgggcatctttaccgagttaggagtt 61
Query: 3439 ctttatgcaagatatcgtgaagagaagctaatggaacacattaagttgttctcaactagg 3498
|| || || ||||| ||| ||||| || |||||||| || || | || |||| |
Sbjct: 62 ctgtacgctagataccgtcctgagaaacttatggaacatatcaaactatttgcaacccga 121
Query: 3499 cttaacattccaaagcttattcgggcatgtgatgaacaacaacactggaaagaacttaca 3558
|| || |||||||| || || | || ||||||||||||||||| ||||| ||||| ||
Sbjct: 122 ctcaatattccaaaactcataagagcttgtgatgaacaacaacattggaaggaactgacc 181
Query: 3559 tacttatacatccaatatgatgagtttgataatgctgctaccactgtcatgaatcactct 3618
|| || || |||||||||||||||||||| ||||| || || || ||||||| || ||
Sbjct: 182 tatttgtatatccaatatgatgagtttgacaatgcagcaacaaccatcatgaaccattca 241
Query: 3619 ccagaatcttgggaccatatgcaattcaaagatatcatagttaaaattgccagtgtggaa 3678
|| ||| | ||||| || ||||||||||||||| | || || ||| |||| | ||||||
Sbjct: 242 cctgaagcatgggatcacatgcaattcaaagatgttattgtcaaagttgctaatgtggag 301
Query: 3679 ctctactataaggctgttcacttctacttgcaagaacatcctgatgtaataaatgatctt 3738
| || || ||| ||||||| ||||| |||||||| ||||| ||| | |||| ||| ||
Sbjct: 302 ttgtattacaagtctgttcatttctatttgcaagagcatccagatcttctaaacgatgtt 361
Query: 3739 ctaaatgtgattgctcttcgtgtggaccatacccgtgtagtagatataatgaggaaggct 3798
| ||||| |||| |||||||| |||||| | || || || ||||| ||| | ||||||
Sbjct: 362 ttgaatgtccttgcacttcgtgttgaccatgcacgcgttgttgatatcatgcgaaaggct 421
Query: 3799 ggccacctcaaattagtcaagccgtacatggttgcagtccaaagcaataatgtgtttgct 3858
|| || ||| | |||||||| |||||||||||||| || |||||||| |||| ||||
Sbjct: 422 ggtcatctccgtcttgtcaagccatacatggttgcagttcagagcaataacgtgtctgct 481
Query: 3859 gtgaatgaagctctgaatgaaatatatgttgaggaagaggactatgatagacttcgagaa 3918
|| |||||||| |||||||| |||||||| ||||| || |||||||||||| | || ||
Sbjct: 482 gttaatgaagccctgaatgagatatatgtggaggaggaagactatgatagattgcgcgag 541
Query: 3919 tcaacagatctgcatgacaatttcgatcagataggtcttgcacagaagattgagaagcat 3978
|||| ||| |||| ||||| || || || ||||| || |||||||||||||| ||||||
Sbjct: 542 tcaattgatttgcacgacaactttgaccaaataggcctggcacagaagattgaaaagcat 601
Query: 3979 gaacttcttgagatgaggcgtgttgctgcatacatttataagaaa-gcaggaagatggaa 4037
|| ||||||||||| || ||||||||||| || |||||||||||| || || || |||||
Sbjct: 602 gagcttcttgagatcagacgtgttgctgcttatatttataagaaaggctggtaggtggaa 661
Query: 4038 gcaatccattgctttgtcaaagaaagacaatctttacaa 4076
||| |||||||| ||||| ||||| || || ||||||||
Sbjct: 662 gcagtccattgccttgtctaagaaggataacctttacaa 700
>gnl|LJGI|BP066698 homologue to UniRef100_Q39834 Cluster: Clathrin heavy chain; n=1;
Glycine max|Rep: Clathrin heavy chain - Glycine max
(Soybean), partial (9%)
Length = 442
Score = 254 bits (128), Expect = 4e-66
Identities = 296/352 (84%)
Strand = Plus / Plus
Query: 2014 gaatgtgagaagaggaatcgtctccgcttactgactcagttcctggagcatcttgtaagt 2073
|||||||||||||||||||| || || || || | ||||| ||||| ||||||||||||
Sbjct: 55 gaatgtgagaagaggaatcggcttcgtttgctttcacagtttctggaacatcttgtaagt 114
Query: 2074 gaaggaagtcaggatgtacatgtacataatgcgctgggtaaaatcatcattgacagcaac 2133
|| ||||| ||||||| |||||| |||||||| |||||||| ||||||||||| ||||||
Sbjct: 115 gagggaagccaggatgcacatgttcataatgctctgggtaagatcatcattgatagcaac 174
Query: 2134 aacaatcctgagcattttctcacaaccaacccatattatgactctcgagttgttggtaaa 2193
||||| || || ||||||||||| || |||||||| ||||| ||||||||||| || |||
Sbjct: 175 aacaacccagaacattttctcactacaaacccatactatgattctcgagttgtgggaaaa 234
Query: 2194 tattgcgagaagcgggatcctacccttgctgttgttgcttatcgaagagggcaatgtgat 2253
||||| || || || ||||||||| | || ||||| |||||| | |||| |||||||||
Sbjct: 235 tattgtgaaaaacgtgatcctaccttggccgttgtggcttataggcgaggacaatgtgat 294
Query: 2254 gatgagctagttaatgtaactaataaaaattccttgttcaaactccaagcaagatatgtt 2313
||||| || | ||||| || || |||||||| ||||||||||| |||||||| |||||
Sbjct: 295 gatgaacttatcaatgtgacaaacaaaaattctttgttcaaactacaagcaaggtatgtg 354
Query: 2314 gtggaaaggatggactctgacctctgggagaaagttcttaatcctgagaatg 2365
|| || |||||||| |||||| ||||||||||||||||| ||||| ||||
Sbjct: 355 gttgagaggatggatggtgacctttgggagaaagttcttaaccctgataatg 406
>gnl|LJGI|TC74428 similar to UniRef100_Q39834 Cluster: Clathrin heavy chain; n=1;
Glycine max|Rep: Clathrin heavy chain - Glycine max
(Soybean), partial (6%)
Length = 787
Score = 73.8 bits (37), Expect = 9e-12
Identities = 43/45 (95%)
Strand = Plus / Plus
Query: 4494 aatgggtggaatggggatgccgccaatgcctccttttggcatgcc 4538
||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 251 aatgggtgggatggggatgcctccaatgcctccttttggcatgcc 295
Score = 56.0 bits (28), Expect = 2e-06
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 4381 caacagaatatgtattcccagttgttaccacttgctttgccagcaccaccgatgcc 4436
||||||||||||||| | || ||||| || ||||||||||| |||||||| |||||
Sbjct: 162 caacagaatatgtatgctcaattgttgcctcttgctttgcctgcaccaccaatgcc 217
>gnl|LJGI|TC69258 similar to UniRef100_Q39834 Cluster: Clathrin heavy chain; n=1;
Glycine max|Rep: Clathrin heavy chain - Glycine max
(Soybean), partial (4%)
Length = 571
Score = 67.9 bits (34), Expect = 5e-10
Identities = 100/122 (81%)
Strand = Plus / Plus
Query: 4315 aaggacaaaattgaggcacaaaatgaggagaaagcaaaggagaaggaggaaaaggacgta 4374
|||||||||||||| |||| || || ||||| || || ||||| || ||||||||||||
Sbjct: 35 aaggacaaaattgaagcaccaatcgaagagaaggctaaagagaaagaagaaaaggacgta 94
Query: 4375 attgctcaacagaatatgtattcccagttgttaccacttgctttgccagcaccaccgatg 4434
|| |||| ||||| |||||| | || ||||| || ||||||||||| || ||||| |||
Sbjct: 95 gtttctcagcagaacatgtatgctcaattgttgcctcttgctttgcctgcgccaccaatg 154
Query: 4435 cc 4436
||
Sbjct: 155 cc 156
>gnl|LJGI|TC57991
Length = 850
Score = 67.9 bits (34), Expect = 5e-10
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 1 atgcaactcttctctgtggatcaacaacggagtcaggttcttgaagcgcatgcagcctca 60
|||||||| |||||||||||||| || || ||||||| ||||||||| ||||| || |||
Sbjct: 716 atgcaacttttctctgtggatcagcagcgcagtcaggctcttgaagctcatgctgcatca 775
Query: 61 tttgcc 66
||||||
Sbjct: 776 tttgcc 781