Miyakogusa Predicted Gene

Lj0g3v0252369.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MHB5_SOYBN 252 81.7 89.5 (tr|I1MHB5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G54160.1 132 63.1 75.7 | Symbols: NFYA5, NF-YA5 | nuclear factor Y, subunit A5 | chr1:20217581-20218706 REVERSE LENGTH=308
Medicago Medtr2g041090.1 251 81.5 86.6 | CCAAT-binding transcription factor | HC | chr2:18006883-18003827 | 20130731
Soybean Glyma15g18970.1 252 81.7 89.5  
LJGI gnl|LJGI|TC57894 932 100.0 100.0 similar to UniRef100_O49915 Cluster: RAPB protein; n=1; Oryza sativa|Rep: RAPB protein - Oryza sativa (Rice), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0252369.1 length: 157 aa.
IPR001289 CCAAT-binding transcription factor, subunit B
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00616 CCAATSUBUNTB 4.6e-25 78-100
109-132
HMMPanther PTHR12632 TRANSCRIPTION 1.6e-52 22-144
HMMPfam PF02045 CBFB_NFYA 7.3e-31 76-132
HMMSmart SM00521 CCAAT-Binding 1.5e-36 74-135
ProfileScan PS51152 NFYA_HAP2_2 37.186 75-135
IPR018362 CCAAT-binding factor, conserved site
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0016602 CCAAT-binding factor complex    
PatternScan PS00686 NFYA_HAP2_1 NA 80-100
Wolf-PSORT
Lj0g3v0252369.1	nucl 10, nucl_plas 6.5, chlo 1, cyto 1, plas 1, extr 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0252369.1