Miyakogusa Predicted Gene

Lj0g3v0201619.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9HHA9_POPTR 277 83.0 87.3 (tr|B9HHA9) DNA polymerase OS=Populus trichocarpa GN=POPTRDRAFT_1083164 PE=3 SV=1
TAIR_pep AT5G67100.1 239 70.9 81.2 | Symbols: ICU2 | DNA-directed DNA polymerases | chr5:26776994-26785104 FORWARD LENGTH=1524
Medicago Medtr5g017070.1 274 82.4 86.7 | DNA polymerase | HC | chr5:6204095-6191331 | 20130731
Soybean Glyma01g39430.1 262 79.4 84.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0201619.1 length: 166 aa.
IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006260 DNA replication    
HMMPfam PF00136 DNA_pol_B 9.7e-47 1-160
IPR017964 DNA-directed DNA polymerase, family B, conserved site
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0003887 DNA-directed DNA polymerase activity    
Biological Process GO:0006139 nucleobase-containing compound metabolic process    
PatternScan PS00116 DNA_POLYMERASE_B NA 46-54
IPR023211 DNA polymerase, palm domain
Gene3D G3DSA:3.90.1600.10 no description 4.4e-13 15-135
no_ID  
Coil coil coiled-coil NA 72-93
HMMPanther PTHR10322 DNA 1.7e-93 1-166
HMMPanther PTHR10322:SF3 DNA 1.7e-93 1-166
Seg seg seg NA 89-106
superfamily SSF56672 DNA/RNA 1.8e-44 1-165
Wolf-PSORT
Lj0g3v0201619.1	cyto 5, nucl 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0201619.1