Miyakogusa Predicted Gene
- Lj0g3v0160149.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
G7L5T5_MEDTR |
185 |
48.6 |
67.3 |
(tr|G7L5T5) TMV resistance protein N OS=Medicago truncatula GN=MTR_7g088950 PE=4 SV=1 |
TAIR_pep |
AT1G27170.2 |
123 |
33.9 |
63.5 |
| Symbols: | transmembrane receptors;ATP binding | chr1:9433577-9439219 FORWARD LENGTH=1384 |
Medicago |
Medtr7g088950.10 |
187 |
49.0 |
68.3 |
| disease resistance protein (TIR-NBS-LRR class) | LC | chr7:34737736-34722184 | 20130731 |
Soybean |
Glyma01g27460.1 |
167 |
43.9 |
61.9 |
|
LJGI |
gnl|LJGI|DC592886 |
83.8 |
87.2 |
87.2 |
similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago truncatula|Rep: TIR; AAA ATPase - Medicago truncatula (Barrel medic), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0160149.2 |
length: 208 aa. |
IPR000157 |
Toll/interleukin-1 receptor homology (TIR) domain |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0005515 |
protein binding |
|
|
Biological Process |
GO:0007165 |
signal transduction |
|
|
HMMPfam |
PF01582 |
TIR |
1e-05 |
2-62 |
superfamily |
SSF52200 |
Toll/Interleukin |
1.5e-06 |
1-71 |
IPR002182 |
NB-ARC |
Molecular Function |
GO:0043531 |
ADP binding |
|
|
HMMPfam |
PF00931 |
NB-ARC |
1.1e-09 |
111-193 |
IPR027417 |
P-loop containing nucleoside triphosphate hydrolase |
superfamily |
SSF52540 |
P-loop |
3e-08 |
90-208 |
no_ID |
|
Gene3D |
G3DSA:3.40.50.300 |
no description |
0.00013 |
120-172 |
HMMPanther |
PTHR23155 |
LEUCINE-RICH |
1.1e-23 |
1-172 |
HMMPanther |
PTHR23155:SF93 |
SUBFAMILY |
1.1e-23 |
1-172 |
- Wolf-PSORT
Lj0g3v0160149.2 cyto 8, nucl 4, cyto_pero 4, cyto_E.R. 4, cyto_plas 4
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0160149.2 |
|