Miyakogusa Predicted Gene

Lj0g3v0160149.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0160149.2 tr|G7L085|G7L085_MEDTR TMV resistance protein N
OS=Medicago truncatula GN=MTR_7g055990 PE=4 SV=1,59.63,3e-19,P-loop
containing nucleoside triphosphate hydrolases,NULL; Toll/Interleukin
receptor TIR domain,Toll,CUFF.10105.2
         (624 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC592886 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ...    84   1e-15

>gnl|LJGI|DC592886 similar to UniRef100_A2Q6G3 Cluster: TIR; AAA ATPase; n=1; Medicago
           truncatula|Rep: TIR; AAA ATPase - Medicago truncatula
           (Barrel medic), partial (13%)
          Length = 596

 Score = 83.8 bits (42), Expect = 1e-15
 Identities = 75/86 (87%)
 Strand = Plus / Plus

                                                                       
Query: 468 ttttgaggctaagagcttcctccgaaatgtcagggaagttgccaaacgacataatggctt 527
           ||||||||||||||||||||||| ||||||||| ||||||  | ||| | |||||||  |
Sbjct: 9   ttttgaggctaagagcttcctcctaaatgtcagagaagtttgcgaacaaaataatggtat 68

                                     
Query: 528 agtttctttacaacaacagcttcttt 553
           |||||||||||||||  |||||||||
Sbjct: 69  agtttctttacaacagaagcttcttt 94