Miyakogusa Predicted Gene
- Lj0g3v0112699.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MH31_SOYBN |
322 |
59.9 |
69.9 |
(tr|K7MH31) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G36290.1 |
232 |
44.1 |
57.6 |
| Symbols: CRT1 | compromised recognition of TCV 1 | chr4:17169669-17173187 REVERSE LENGTH=635 |
| Medicago |
Medtr8g076590.1 |
320 |
58.7 |
71.4 |
| histidine kinase-, DNA gyrase B | HC | chr8:32453780-32471662 | 20130731 |
| Soybean |
Glyma02g05800.1 |
251 |
63.4 |
71.2 |
|
| LJGI |
gnl|LJGI|TC71782 |
1225 |
99.8 |
99.8 |
similar to UniRef100_A7QE44 Cluster: Chromosome chr4 scaffold_83, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr4 scaffold_83, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0112699.1 |
length: 256 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Coil |
coil |
coiled-coil |
NA |
211-246 |
| HMMPanther |
PTHR23336 |
ZINC |
2.9e-66 |
1-182 |
| HMMPanther |
PTHR23336:SF7 |
SUBFAMILY |
2.9e-66 |
1-182 |
| Seg |
seg |
seg |
NA |
86-96 |
- Wolf-PSORT
Lj0g3v0112699.1 chlo 5, nucl 4, mito 2.5, cyto 2, cyto_mito 2, cysk_nucl 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0112699.1 |
|