Miyakogusa Predicted Gene

Lj0g3v0082729.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1LCU6_SOYBN 1075 83.0 86.7 (tr|I1LCU6) Uncharacterized protein OS=Glycine max PE=3 SV=2

TAIR_pep AT1G68750.1 860 67.9 78.7 | Symbols: ATPPC4, PPC4 | phosphoenolpyruvate carboxylase 4 | chr1:25822942-25828104 REVERSE LENGTH=1032

Medicago Medtr1g094010.1 1036 80.2 84.9 | phosphoenolpyruvate carboxylase | HC | chr1:42168758-42174619 | 20130731

Soybean Glyma01g22840.1 929 73.8 80.7

LJGI gnl|LJGI|TC75955 1166 100.0 100.0 homologue to UniRef100_Q6Q2Z9 Cluster: Phosphoenolpyruvate carboxylase; n=1; Glycine max|Rep: Phosphoenolpyruvate carboxylase - Glycine max (Soybean), partial (30%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0082729.1 length: 650 aa.

IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain

method AccNumber shortName E-value location

Molecular Function GO:0003824 catalytic activity

superfamily SSF51621 Phosphoenolpyruvate/pyruvate 5.6e-131 18-641

IPR018129 Phosphoenolpyruvate carboxylase, active site

Biological Process GO:0006099 tricarboxylic acid cycle

Molecular Function GO:0008964 phosphoenolpyruvate carboxylase activity

PatternScan PS00781 PEPCASE_1 NA 150-161

IPR021135 Phosphoenolpyruvate carboxylase

Biological Process GO:0006099 tricarboxylic acid cycle

Molecular Function GO:0008964 phosphoenolpyruvate carboxylase activity

Biological Process GO:0015977 carbon fixation

FPrintScan PR00150 PEPCARBXLASE 4.3e-18 149-162
202-218
261-276

HMMPfam PF00311 PEPcase 4.3e-51 145-332
427-642

no_ID

Coil coil coiled-coil NA 467-492

Gene3D G3DSA:1.20.1440.90 no description 2.5e-53 439-541

HMMPanther PTHR30523 PHOSPHOENOLPYRUVATE 2.3e-197 1-642

Seg seg seg NA 402-430
447-458
474-486

Wolf-PSORT

Lj0g3v0082729.1 cyto 6, nucl 5, chlo 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0082729.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1LCU6_SOYBN	1075	83.0	86.7	(tr\|I1LCU6) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep	AT1G68750.1	860	67.9	78.7	\| Symbols: ATPPC4, PPC4 \| phosphoenolpyruvate carboxylase 4 \| chr1:25822942-25828104 REVERSE LENGTH=1032
Medicago	Medtr1g094010.1	1036	80.2	84.9	\| phosphoenolpyruvate carboxylase \| HC \| chr1:42168758-42174619 \| 20130731
Soybean	Glyma01g22840.1	929	73.8	80.7
LJGI	gnl\|LJGI\|TC75955	1166	100.0	100.0	homologue to UniRef100_Q6Q2Z9 Cluster: Phosphoenolpyruvate carboxylase; n=1; Glycine max\|Rep: Phosphoenolpyruvate carboxylase - Glycine max (Soybean), partial (30%)

IPR015813	Pyruvate/Phosphoenolpyruvate kinase-like domain
Lj0g3v0082729.1				length: 650 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003824	catalytic activity
superfamily	SSF51621	Phosphoenolpyruvate/pyruvate	5.6e-131	18-641
IPR018129	Phosphoenolpyruvate carboxylase, active site
Biological Process	GO:0006099	tricarboxylic acid cycle
Molecular Function	GO:0008964	phosphoenolpyruvate carboxylase activity
PatternScan	PS00781	PEPCASE_1	NA	150-161
IPR021135	Phosphoenolpyruvate carboxylase
Biological Process	GO:0006099	tricarboxylic acid cycle
Molecular Function	GO:0008964	phosphoenolpyruvate carboxylase activity
Biological Process	GO:0015977	carbon fixation
FPrintScan	PR00150	PEPCARBXLASE	4.3e-18	149-162 202-218 261-276
HMMPfam	PF00311	PEPcase	4.3e-51	145-332 427-642
no_ID
Coil	coil	coiled-coil	NA	467-492
Gene3D	G3DSA:1.20.1440.90	no description	2.5e-53	439-541
HMMPanther	PTHR30523	PHOSPHOENOLPYRUVATE	2.3e-197	1-642
Seg	seg	seg	NA	402-430 447-458 474-486