Miyakogusa Predicted Gene
- Lj0g3v0074869.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7LIS7_SOYBN |
420 |
87.6 |
90.1 |
(tr|K7LIS7) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G13610.1 |
348 |
81.7 |
89.6 |
| Symbols: | Protein of unknown function (DUF155) | chr5:4383073-4384808 FORWARD LENGTH=402 |
| Medicago |
Medtr1g049180.1 |
427 |
88.1 |
91.1 |
| DUF155 family protein | HC | chr1:18993014-19002205 | 20130731 |
| Soybean |
Glyma10g22150.1 |
419 |
87.6 |
90.1 |
|
| LJGI |
gnl|LJGI|TC60095 |
1415 |
100.0 |
100.0 |
similar to UniRef100_A7PIB4 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (71%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0074869.1 |
length: 237 aa. |
| IPR003734 |
Protein of unknown function DUF155 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR16255 |
UNCHARACTERIZED |
7.6e-65 |
13-232 |
| HMMPfam |
PF02582 |
DUF155 |
1.1e-33 |
14-184 |
| no_ID |
|
| HMMPanther |
PTHR16255:SF0 |
SUBFAMILY |
7.6e-65 |
13-232 |
| Seg |
seg |
seg |
NA |
210-226 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
8 |
30 |
| 208 |
230 |
- Wolf-PSORT
Lj0g3v0074869.1 extr 7, golg 3, E.R. 2, nucl 1, mito 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0074869.1 |
|