Miyakogusa Predicted Gene

Lj0g3v0074869.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0074869.1 Non Chatacterized Hit- tr|I5CQ43|I5CQ43_9BURK
Uncharacterized protein OS=Burkholderia terrae BS001
P,27.31,9e-18,DUF155,Protein of unknown function DUF155; SUBFAMILY NOT
NAMED,NULL; UNCHARACTERIZED,Protein of unkn,CUFF.3779.1
         (237 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G13610.1 | Symbols:  | Protein of unknown function (DUF155) |...   348   2e-96
AT1G69380.1 | Symbols:  | Protein of unknown function (DUF155) |...   288   3e-78

>AT5G13610.1 | Symbols:  | Protein of unknown function (DUF155) |
           chr5:4383073-4384808 FORWARD LENGTH=402
          Length = 402

 Score =  348 bits (893), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 165/202 (81%), Positives = 181/202 (89%)

Query: 6   LNGSSGCYMVVFQYGSIVLFNVPEHEVDGYLKIVKKHASGLLPEMRKDEYEVREKPALST 65
           ++GS   YMVVF YGSIVLFNV EHEVD YLK+V++HASGLLPEMRKDEYEVRE P L T
Sbjct: 174 ISGSESIYMVVFHYGSIVLFNVREHEVDEYLKVVERHASGLLPEMRKDEYEVRENPNLDT 233

Query: 66  WMRGGLDYIMLQYLDVDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFK 125
           WM  G D+I LQ+L+ DGIRTIG VLGQSIALDYYGRQVDGMVAEFT+INR++E TG F 
Sbjct: 234 WMEVGRDFIRLQFLNTDGIRTIGCVLGQSIALDYYGRQVDGMVAEFTEINRQLEITGTFT 293

Query: 126 MQRKKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYGQIWEYLRDEFELTQRFASLD 185
           M+RKKLFQLVGKAN  LADVILKLGLFERSDIAWKDAKYGQIWE+LRDEFELTQ FA+LD
Sbjct: 294 MKRKKLFQLVGKANVILADVILKLGLFERSDIAWKDAKYGQIWEFLRDEFELTQSFANLD 353

Query: 186 FKLKFVEHNIRFLQEILQNRKS 207
           +KLKFVEHN+RFLQEILQNRKS
Sbjct: 354 YKLKFVEHNVRFLQEILQNRKS 375


>AT1G69380.1 | Symbols:  | Protein of unknown function (DUF155) |
           chr1:26081729-26083431 REVERSE LENGTH=373
          Length = 373

 Score =  288 bits (736), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 136/201 (67%), Positives = 167/201 (83%), Gaps = 1/201 (0%)

Query: 10  SGC-YMVVFQYGSIVLFNVPEHEVDGYLKIVKKHASGLLPEMRKDEYEVREKPALSTWMR 68
           S C +MVVFQYGS +LFNV +++VD YL IV++HASGLL EMRKD+Y V+EKP L   M+
Sbjct: 144 SNCKFMVVFQYGSAILFNVDDNDVDRYLDIVRRHASGLLTEMRKDDYAVKEKPLLIEEMK 203

Query: 69  GGLDYIMLQYLDVDGIRTIGSVLGQSIALDYYGRQVDGMVAEFTDINREMEATGKFKMQR 128
           GG DYI+L+ LD + IR IGSVLGQSIALDY   QV+ +V EF DINR M  TG F M R
Sbjct: 204 GGPDYIVLKTLDTNSIRIIGSVLGQSIALDYSVSQVNKLVEEFADINRSMAKTGTFTMTR 263

Query: 129 KKLFQLVGKANSNLADVILKLGLFERSDIAWKDAKYGQIWEYLRDEFELTQRFASLDFKL 188
           KKLFQLVGKANSN+ADVILK+GLFERS+IAW++A+Y QI+EYLR+E+E++QRF  LD+KL
Sbjct: 264 KKLFQLVGKANSNIADVILKVGLFERSEIAWREARYAQIYEYLREEYEISQRFGDLDYKL 323

Query: 189 KFVEHNIRFLQEILQNRKSDF 209
           KF+EHNI FLQE++QNR+SD 
Sbjct: 324 KFIEHNIHFLQEVMQNRQSDL 344