Miyakogusa Predicted Gene
- Lj0g3v0062789.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M0S1_SOYBN |
149 |
63.4 |
73.2 |
(tr|K7M0S1) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G07940.1 |
82.8 |
45.1 |
53.3 |
| Symbols: | Calcium-dependent ARF-type GTPase activating protein family | chr3:2529542-2531368 FORWARD LENGTH=385 |
| Medicago |
Medtr3g017500.1 |
125 |
57.0 |
73.6 |
| calcium-dependent ARF-type GTPase activating family protein | HC | chr3:4993371-4986754 | 20130731 |
| Soybean |
Glyma11g21510.1 |
128 |
56.2 |
65.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0062789.1 |
length: 121 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPanther |
PTHR23180 |
CENTAURIN/ARF |
1.4e-22 |
1-121 |
| HMMPanther |
PTHR23180:SF25 |
CENTAURIN/ARF-RELATED |
1.4e-22 |
1-121 |
| Seg |
seg |
seg |
NA |
84-97 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
96 |
114 |
- Wolf-PSORT
Lj0g3v0062789.1 nucl 11, chlo 1, cyto 1, mito 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0062789.1 |
|