| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LEH5_SOYBN | 626 | 61.9 | 74.9 | (tr|K7LEH5) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT1G12700.1 | 353 | 36.2 | 57.7 | | Symbols: | ATP binding;nucleic acid binding;helicases | chr1:4323722-4326227 REVERSE LENGTH=735 |
| Medicago | Medtr0014s0250.1 | 617 | 62.2 | 74.3 | | pentatricopeptide (PPR) repeat protein | LC | scaffold0014:136046-137820 | 20130731 |
| Soybean | Glyma09g30160.1 | 626 | 61.7 | 74.7 | |
| LJGI | gnl|LJGI|GO030841 | 577 | 88.9 | 88.9 | weakly similar to UniRef100_A7R617 Cluster: Chromosome undetermined scaffold_1129, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_1129, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%) |
| Lj0g3v0047089.1 | length: 470 aa. | |||
| IPR002885 | Pentatricopeptide repeat | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| HMMPfam | PF12854 | PPR_1 | 3.6e-12 | 160-191 334-364 |
| HMMPfam | PF13041 | PPR_2 | 1.9e-12 | 40-85 93-141 198-247 268-317 380-420 |
| HMMTigr | TIGR00756 | PPR: | 0.00015 | 43-77 96-130 131-165 166-200 201-235 237-270 271-305 306-340 341-374 377-410 411-441 |
| ProfileScan | PS51375 | PPR | 10.380 | 41-75 6-40 94-128 129-163 164-198 199-233 234-268 269-303 304-338 339-373 374-408 409-443 |
| IPR011990 | Tetratricopeptide-like helical | |||
| Molecular Function | GO:0005515 | protein binding | ||
| Gene3D | G3DSA:1.25.40.10 | no description | 0.00017 | 301-437 |
| no_ID | ||||
| HMMPanther | PTHR24015 | FAMILY | 1.3e-151 | 2-453 |
| HMMPanther | PTHR24015:SF0 | SUBFAMILY | 1.3e-151 | 2-453 |
| superfamily | SSF48452 | TPR-like | 0.013 | 339-438 234-331 94-193 |
Lj0g3v0047089.1 chlo 7.5, chlo_mito 4.5, cyto 3, extr 1, E.R. 1, golg 1
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0047089.1 | Not targeted | -43.076 | -0.178 | -0.745 | 60.36% | -42.153 |