Miyakogusa Predicted Gene
- Lj0g3v0044979.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
--No_Hits--
|
|
|
|
|
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
--No_Hits--
|
|
|
|
|
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
gnl|LJGI|AU252126 |
220 |
97.5 |
97.5 |
similar to UniRef100_UPI000016335A Cluster: CHR11 (CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase; n=1; Arabidopsis thaliana|Rep: CHR11 (CHROMATIN-REMODELING PROTEIN 11); DNA-dependent ATPase - Arabidopsis thaliana, partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0044979.1 |
length: 73 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Seg |
seg |
seg |
NA |
41-59 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
32 |
54 |
- Wolf-PSORT
Lj0g3v0044979.1 chlo 4, mito 3, cyto 2, mito_plas 2, nucl 1, plas 1, vacu 1, E.R. 1, cysk 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, cyto_pero 1, cysk_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0044979.1 |
|