Lotus japonicus News

Lotus japonicus genome assembly build 2.5

Kazusa DNA Research Institute is pleased to release Lotus japonicus genome assembly build 2.5.

  • Summary of build 2.5

  • Database of build 1.0 (previous release)

  • publication (May 29, 2008):
    Genome Structure of the Legume, Lotus japonicus. Sato, S. et al. DNA Research

    Lotus japonicus predicted gene keyword search


    e.g. chr1.CM0088.10.r2.d, kinase, Na+/H+ [Gene ID help]
    case sensitive Include Word
    Stringency: (eg; 1e-10)

    BAC/TAC clones
    LjSGA contigs
    Output format:

    Lotus japonicus genome browser

    chromosome chromosome1 chromosome2 chromosome3 chromosome4 chromosome5 chromosome6

    Corresponding gene name search


    Or load the CDS name(s) by a text file

    Enter the CDS name(s) by separating each CDS name with a space (not comma).

    e.g.
    chr1.CM0088.10.ndchr1.CM0088.10.r2.d( build 1.0 -> 2.5 )
    LjSGA_049910.1chr1.CM0001.730.r2.m( build 1.0 -> 2.5 )
    chr4.CM0007.360.r2.mchr1.CM0088.10.nd( build 2.5 -> 1.0 )

    About Lotus japonicus

    Lotus japonicus (Japanese common name: Miyakogusa) is a typical model legume. Here we report the first whole genome structure of the legume, L. japonicus, its characteristic genome features, and a variety of information and material resources that were developed during this study. (Read more...)