information on T3E15
(58566..58859)
Direction: +
Frame: 3
ORF
58542..59030 (Met: 58560 58593 58662 58738 58810 58825 58842 58935 58701 58706 58837)
WRETTIMAGSGSFYRDWMYKRFDEVTGNLSAEYVAGVEQFMTFANSKPIVQTS**FIVLV
VYARMKNTLSRVEELIVICLVKDLCLIIMFGISMEKK*MDIGTSTYTDRTYFSLNYEEVG
NVVEDPYVDMVNDAFNFNVGYDDNYHHDDSYQNVEEPVRNH
GenBank annotation
None
BLASTX cluster
58563..62361 cluster 21 22 hits for protein gene
BLASTN cluster
None
GENSCAN
58560..66103 gene model 17
Suboptimal exon
58560..58677 Init Phase: 0 Score: 0.515
58792..59018 Intr Phase: 1 Score: 0.225
Grail
58560..58677 exon Phase: 0 Score: 77
58797..59018 exon Phase: 0 Score: 69
Exon-Intron boundary candidatates
| Acceptor |
| 58571 [0.002] (2) |
58577 [0.004] (2) |
58648 [0.015] (1) |
58727 [0.026] (2) |
| 58787 [0.002] (2) |
58824 [0.001] (0) |
58852 [0.011] (1) |
58900 [0.003] (1) |
| 58918 [0.007] (1) |
58921 [0.002] (1) |
58997 [0.017] (2) |
59004 [0.59N/0.059] (0) |
| Donor |
| 58677 [0.87N/0.559] (1) |
58704 [1.00N/0.757] (1) |
58727 [0.006] (0) |
58758 [0.021] (1) |
| 58876 [0.020] (2) |
58905 [0.019] (1) |
58937 [0.004] (0) |
58966 [0.023] (2) |
| 59018 [0.021] (0) |
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Entrance